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The map label for this gene is yfcN [C]

Identifier: 213158079

GI number: 213158079

Start: 2866756

End: 2867451

Strand: Direct

Name: yfcN [C]

Synonym: AB57_2791

Alternate gene names: 213158079

Gene position: 2866756-2867451 (Clockwise)

Preceding gene: 213158078

Following gene: 213158083

Centisome position: 70.78

GC content: 41.24

Gene sequence:

>696_bases
ATGAGTAATAAAGATTCATCGCTTTCTAAAGAGCAACAAAAGTTATTGAAGCAATTTAAAAAGCAAATCTCCAATCCTCA
TTCAAGCAAAATCGCAAATCAGCCTGAGTCTAAAAAATCTCAGGCTGAGTCTGAAGAATTGGAAGACACACATCTATTTA
AGCAGGCTGTTGCAGGCGTTAAACCCATCAACAATAGTAATATTGCCGATGTAAAAACCCCACGTGCCAAAAAAGTTGAT
GCACAAACTCTGGCGAAACGTGCAGCTGCCGAAGGTGGTCGTGATACCGAACATGCCGAGCTATCAGATACACAAGCTGC
TTTAAATCCGGTCGCAAGTCAAGCAACGTTAAGCTATCGCATTGCGACTCTTCAACATAAGGTTTTTGAAGACTTAAAAG
CAGGCAAGATGCGTTGGTTTGAAGCTGTAGATTTACACGGCTGTACCATTGAACAAGCACGTGACGCAGTTTTACAAATC
ATCCAGATGGCAAAAGATGAAAATCAAAATGTCATTAAAATTGTGCATGGTAAAGGCCCAGAAGCGGTCTTAAAAACCTA
TGTCAACGGATGGCTACGCCAACATCGTGATGTTTTGGCATTTGTAAGTGCCCCTGAAAACCAAGGTGGCACCGGCGCTG
TTCTCGTACTGCTTAAACGTGCAGAAAAAAATCCAAAATTTGAACAAAAAAAATGA

Upstream 100 bases:

>100_bases
TCACAGTTTCTTGGTTGGCGAAAGTTTTATGAAACAACCACGTCCAGATCAAGCTTTTACTGCCCTTTTTGGACAACCTC
AAACGGTTTAATGAAGATAT

Downstream 100 bases:

>100_bases
TCCTTTGGGATCATTTTTTTACATCAAATACCTGTAATAATTGAGCAACTACTGCAATGGCAATCATTGCAGGTTGTTTT
GATGAAATCCCGTCTATCCC

Product: Smr protein/MutS2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSNKDSSLSKEQQKLLKQFKKQISNPHSSKIANQPESKKSQAESEELEDTHLFKQAVAGVKPINNSNIADVKTPRAKKVD
AQTLAKRAAAEGGRDTEHAELSDTQAALNPVASQATLSYRIATLQHKVFEDLKAGKMRWFEAVDLHGCTIEQARDAVLQI
IQMAKDENQNVIKIVHGKGPEAVLKTYVNGWLRQHRDVLAFVSAPENQGGTGAVLVLLKRAEKNPKFEQKK

Sequences:

>Translated_231_residues
MSNKDSSLSKEQQKLLKQFKKQISNPHSSKIANQPESKKSQAESEELEDTHLFKQAVAGVKPINNSNIADVKTPRAKKVD
AQTLAKRAAAEGGRDTEHAELSDTQAALNPVASQATLSYRIATLQHKVFEDLKAGKMRWFEAVDLHGCTIEQARDAVLQI
IQMAKDENQNVIKIVHGKGPEAVLKTYVNGWLRQHRDVLAFVSAPENQGGTGAVLVLLKRAEKNPKFEQKK
>Mature_230_residues
SNKDSSLSKEQQKLLKQFKKQISNPHSSKIANQPESKKSQAESEELEDTHLFKQAVAGVKPINNSNIADVKTPRAKKVDA
QTLAKRAAAEGGRDTEHAELSDTQAALNPVASQATLSYRIATLQHKVFEDLKAGKMRWFEAVDLHGCTIEQARDAVLQII
QMAKDENQNVIKIVHGKGPEAVLKTYVNGWLRQHRDVLAFVSAPENQGGTGAVLVLLKRAEKNPKFEQKK

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=178, Percent_Identity=31.4606741573034, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787602, Length=179, Percent_Identity=26.2569832402235, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 25568; Mature: 25437

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKDSSLSKEQQKLLKQFKKQISNPHSSKIANQPESKKSQAESEELEDTHLFKQAVAGV
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
KPINNSNIADVKTPRAKKVDAQTLAKRAAAEGGRDTEHAELSDTQAALNPVASQATLSYR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IATLQHKVFEDLKAGKMRWFEAVDLHGCTIEQARDAVLQIIQMAKDENQNVIKIVHGKGP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH
EAVLKTYVNGWLRQHRDVLAFVSAPENQGGTGAVLVLLKRAEKNPKFEQKK
HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SNKDSSLSKEQQKLLKQFKKQISNPHSSKIANQPESKKSQAESEELEDTHLFKQAVAGV
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
KPINNSNIADVKTPRAKKVDAQTLAKRAAAEGGRDTEHAELSDTQAALNPVASQATLSYR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IATLQHKVFEDLKAGKMRWFEAVDLHGCTIEQARDAVLQIIQMAKDENQNVIKIVHGKGP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH
EAVLKTYVNGWLRQHRDVLAFVSAPENQGGTGAVLVLLKRAEKNPKFEQKK
HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]