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The map label for this gene is yadH [H]

Identifier: 213158034

GI number: 213158034

Start: 2810817

End: 2811590

Strand: Direct

Name: yadH [H]

Synonym: AB57_2745

Alternate gene names: 213158034

Gene position: 2810817-2811590 (Clockwise)

Preceding gene: 213158033

Following gene: 213158035

Centisome position: 69.39

GC content: 36.95

Gene sequence:

>774_bases
ATGAACTTTAACCAACTGCAAATTGCCCTCTGGACTCTAGTTCGTAAAGAAGTACGCCGATTTCTACGCATTTGGCCACA
AACCTTATTACCACCTGCAATTACCATGAGTTTGTACTTTGTCATTTTCGGTAATTTGGTTGGCTCACGTATTGGTGAAA
TGGGTGGCGTAAGTTACATGCAATTTATTGTACCGGGCCTCATCATGATGGCTGTCATTACCAACAGTTATGCCAATGTA
TCATCGAGTTTCTTTAGTGTGAAATTTCAAAAAAGCATTGAAGAGCTGATTATGAGCCCTGTGCCCTTACATATTATTTT
ATGGGGCTATGTTATTGGTGGTATTTGTCGAGGTGTCTTGGTTGGTGCAATCGTTACCGCGATGAGTATGTTTTTTACTG
ATCTTTTTATCCATAACTGGTTCGTAACTATATATACAGTATTAATTACATCCGTTTTATTTTCTTTAGGCGGTTTTATT
AATGCAGTCTACGCAAAATCATTTGATGATATTTCTATTATTCCAACATTTGTACTTACTCCACTTACCTATTTAGGTGG
TGTGTTTTATGCCATTAGTGCACTTGGTCCTTTTTGGCAAAAACTTTCTTTAATTAATCCTATTGTTTATATGGTAAATG
CTTTCCGTTTCGGCATTTTAGGTCATAGTGACGTGAACGTTTCGTTCTCTTTAATCATTGTGACATTATGCTGTGCTGTA
CTTTACGGAATTGCTTATTATTTACTTGCTCGTGGTTCAGGAATGCGTGAATGA

Upstream 100 bases:

>100_bases
AGTCACAAGGTATTCGTGTTCGCAGCATGCGAAATAAATCGAATCGTCTCGAAGAGCTATTTGTCAAAATGGTCGAGAAA
AATCTTGAAGGAGCGGCAAA

Downstream 100 bases:

>100_bases
GTGTCGAACAGTCTTTATTGGGTAAAGAAACCCAATATCCAACTAGCTATCAACCCGATGTGTTATTTCCAATTGCACGT
GCTCAATCTCGTGAAAAATA

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNFNQLQIALWTLVRKEVRRFLRIWPQTLLPPAITMSLYFVIFGNLVGSRIGEMGGVSYMQFIVPGLIMMAVITNSYANV
SSSFFSVKFQKSIEELIMSPVPLHIILWGYVIGGICRGVLVGAIVTAMSMFFTDLFIHNWFVTIYTVLITSVLFSLGGFI
NAVYAKSFDDISIIPTFVLTPLTYLGGVFYAISALGPFWQKLSLINPIVYMVNAFRFGILGHSDVNVSFSLIIVTLCCAV
LYGIAYYLLARGSGMRE

Sequences:

>Translated_257_residues
MNFNQLQIALWTLVRKEVRRFLRIWPQTLLPPAITMSLYFVIFGNLVGSRIGEMGGVSYMQFIVPGLIMMAVITNSYANV
SSSFFSVKFQKSIEELIMSPVPLHIILWGYVIGGICRGVLVGAIVTAMSMFFTDLFIHNWFVTIYTVLITSVLFSLGGFI
NAVYAKSFDDISIIPTFVLTPLTYLGGVFYAISALGPFWQKLSLINPIVYMVNAFRFGILGHSDVNVSFSLIIVTLCCAV
LYGIAYYLLARGSGMRE
>Mature_257_residues
MNFNQLQIALWTLVRKEVRRFLRIWPQTLLPPAITMSLYFVIFGNLVGSRIGEMGGVSYMQFIVPGLIMMAVITNSYANV
SSSFFSVKFQKSIEELIMSPVPLHIILWGYVIGGICRGVLVGAIVTAMSMFFTDLFIHNWFVTIYTVLITSVLFSLGGFI
NAVYAKSFDDISIIPTFVLTPLTYLGGVFYAISALGPFWQKLSLINPIVYMVNAFRFGILGHSDVNVSFSLIIVTLCCAV
LYGIAYYLLARGSGMRE

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=250, Percent_Identity=58.4, Blast_Score=306, Evalue=6e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28673; Mature: 28673

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNFNQLQIALWTLVRKEVRRFLRIWPQTLLPPAITMSLYFVIFGNLVGSRIGEMGGVSYM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
QFIVPGLIMMAVITNSYANVSSSFFSVKFQKSIEELIMSPVPLHIILWGYVIGGICRGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VGAIVTAMSMFFTDLFIHNWFVTIYTVLITSVLFSLGGFINAVYAKSFDDISIIPTFVLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
PLTYLGGVFYAISALGPFWQKLSLINPIVYMVNAFRFGILGHSDVNVSFSLIIVTLCCAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LYGIAYYLLARGSGMRE
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]