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The map label for this gene is yneE [H]

Identifier: 213157929

GI number: 213157929

Start: 3532261

End: 3533079

Strand: Direct

Name: yneE [H]

Synonym: AB57_3422

Alternate gene names: 213157929

Gene position: 3532261-3533079 (Clockwise)

Preceding gene: 213157928

Following gene: 213157931

Centisome position: 87.21

GC content: 40.54

Gene sequence:

>819_bases
ATGCTGATTTCGGCAATCATTGGTGGGGTTGAATATATTAACCTCTATCGTTTTCCAGAAATTCCTTTAGTTGGCTTTAC
TTTAATTGGTGTCGTACTTTCTATTTTTTTAGGTTTTAAGAATACTGCATGTTATGACCGCTGGTGGGAAGCCCGAAAAT
TATGGGGGGTCCTGATTGCGACTTCGCGACATTTCGACCGTGACTGCCGGATTTTAACTCAAGCCCGCCGTGAACGTGTC
ATTCAGCACGTTATTGTATTCGCCAATGTGTTACGTGACCGTTTACGTCGTCAAACAGCCAACCCCACCGAGCTAATACA
AACCAGTGGCATGAGCCAACAAGCACTTACCCAACTTTACCAACAAAATAACGCACCTCAATATACGCTTAGCCTTATTC
AATGGGAATTATTACAAGCGCTTAAAGAAGGGGAAATTTCAGATATTATTTATGCTCAAATGAATAAGAATGTTGCAGAT
CTAAGTGTCGTACAAACTGGCTGTGACCGTATTGCAAATACTCCTATTCCGTTTGCTTATTCAGTTTTGCTTAACCGTAC
CGTTTATTTTTTCTGTTTTATGTTGCCGTTTAGCTTAGGATCTTTGCTTGGTTTAGCAACGCCTTTACTGGTTGGAATTC
TGGCTTATACATTTTTAGGACTTGATGCTTTAAGTACCGAAATTGAAGAACCATTTGGCACGCAAAGTAATGATTTACCT
TTAGATGCAATGGTACGTAGTATCGAAATTGAGCTTTTGGGGACACTTGGTAAGCCCACACCTCCTCCAATTCAAGCTCA
AGATAACAACTTGCTCTAA

Upstream 100 bases:

>100_bases
AAATAAAATGATTGTTCGTGAACAGCCCAGTATTTTTAAAGTTTTATTCTCTTGGCGAGGGACGATTTTACCTAAAATTT
TGCCCTCTTTAGGGGTAGTA

Downstream 100 bases:

>100_bases
AATGCGATTAGATAAAACGCTCCCAAATGCCTTGCTGGTTACTCGTTGGTTTAGGGGTGTTTCCTAATTTAATCCACGGC
ATATTTTCACCATGAAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MLISAIIGGVEYINLYRFPEIPLVGFTLIGVVLSIFLGFKNTACYDRWWEARKLWGVLIATSRHFDRDCRILTQARRERV
IQHVIVFANVLRDRLRRQTANPTELIQTSGMSQQALTQLYQQNNAPQYTLSLIQWELLQALKEGEISDIIYAQMNKNVAD
LSVVQTGCDRIANTPIPFAYSVLLNRTVYFFCFMLPFSLGSLLGLATPLLVGILAYTFLGLDALSTEIEEPFGTQSNDLP
LDAMVRSIEIELLGTLGKPTPPPIQAQDNNLL

Sequences:

>Translated_272_residues
MLISAIIGGVEYINLYRFPEIPLVGFTLIGVVLSIFLGFKNTACYDRWWEARKLWGVLIATSRHFDRDCRILTQARRERV
IQHVIVFANVLRDRLRRQTANPTELIQTSGMSQQALTQLYQQNNAPQYTLSLIQWELLQALKEGEISDIIYAQMNKNVAD
LSVVQTGCDRIANTPIPFAYSVLLNRTVYFFCFMLPFSLGSLLGLATPLLVGILAYTFLGLDALSTEIEEPFGTQSNDLP
LDAMVRSIEIELLGTLGKPTPPPIQAQDNNLL
>Mature_272_residues
MLISAIIGGVEYINLYRFPEIPLVGFTLIGVVLSIFLGFKNTACYDRWWEARKLWGVLIATSRHFDRDCRILTQARRERV
IQHVIVFANVLRDRLRRQTANPTELIQTSGMSQQALTQLYQQNNAPQYTLSLIQWELLQALKEGEISDIIYAQMNKNVAD
LSVVQTGCDRIANTPIPFAYSVLLNRTVYFFCFMLPFSLGSLLGLATPLLVGILAYTFLGLDALSTEIEEPFGTQSNDLP
LDAMVRSIEIELLGTLGKPTPPPIQAQDNNLL

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family [H]

Homologues:

Organism=Escherichia coli, GI87081925, Length=234, Percent_Identity=42.3076923076923, Blast_Score=184, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021134 [H]

Pfam domain/function: PF01062 Bestrophin [H]

EC number: NA

Molecular weight: Translated: 30611; Mature: 30611

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]