Click here to switch to the map view.

The map label for this gene is 213157893

Identifier: 213157893

GI number: 213157893

Start: 3489669

End: 3490841

Strand: Direct

Name: 213157893

Synonym: AB57_3385

Alternate gene names: NA

Gene position: 3489669-3490841 (Clockwise)

Preceding gene: 213157891

Following gene: 213157894

Centisome position: 86.15

GC content: 39.81

Gene sequence:

>1173_bases
ATGACTTCCGCCCCACTCAAGGCCCCAATTAACTGGACCGCTAGCATTACCTTAATTGGTTTACCAATTCTTGCTGCAAT
CATAATCCCGATTTATGCGTATTATTATGATTTTAGTGTAAGCGCATGGGTAAGCTTATTTTTTCTTTTAGCTTTAAGTA
GCATGGGGATTACTGCTGGTTACCATCGTCTTTGGGCACACCGTGCTTATGAAGCGTCGTTACCACTTAAAATTCTTTTA
ATGATTGGCGGCACATTTGCTGTACAAAACAGTATTCTGTTTTGGGCATCTGGTCACCGTACCCATCACCGTCATGTCGA
CGATGTAGATGAAGATCCATATTCAATTGAACGTGGCTTTTGGTATGCCCATATGGGTTGGATGATCCGCGATCATTCTC
CATCTGAACCAGATTTTAAAAATGCACCAGACTTACTCAATGACAAACTGGTGATGTTCCAACATAAATACTATGCCTTG
ATGGTCGTAGCAGTTCACGTTGGTATTTTAGGTTTGGTTGGCTGGGCAACTGGCGATTTATGGGGTGTTGTACTTCTTGG
TGGCCTATTACGTTTAATCATTAGTCATCAAGTTACATTCTTCATCAACTCACTTTGCCACATGTTCGGTAAACGCCCTT
ATACCGATGAAAACTCAGCACGCGATAACTTCTGGTTAGCGATTGCAACTTGGGGTGAGGGTTACCACAACTATCACCAT
ATTTTCCAGTACGACTATCGTAATGGTGTGAAATGGTGGCAATATGATCCAACAAAATGGCTAATCTGGACATGCTCTAA
GATTGGTTTAGCAAAGAACCTACGTCGTATTCCAAGCTTTAATATTAAAAAAGCAGAATTGGCAATGAAGTTTAAATATG
CTGAACAAGACTTGGCTATTTATGGTCATGATGTAAATGCCGACATTAGTCAAATGAAGCAACGTATTGCTCAAGAGTAT
GAAGCATTTACACATACTTTAAATGACTGGGCGAAACTCAAAGAACAAGAGTTACAAGCAAAGAAAGCAGCAATGGCTGA
AAAGATTCACAAAATGGATCACAAGTTAAAAGTTGATTTCCAATTGCTTGAACATCGTTTGAGTCATCACCGTGAGTGTT
TAGAAACTTTAATGCGTAACATTAAAAAGAACACAAACGTCGTACCAGACTAA

Upstream 100 bases:

>100_bases
ATATGATGTGCAAAATAGCAATATATCTTGAAGATTGGTTTTGCTATGTCGATTTGTCTTTTTACCTTGTATAACAAGGT
TTCTAGGAGCGCTGCCGGAT

Downstream 100 bases:

>100_bases
TACGTGTTTATCCCGAAATAGCACCTGTAGAGCCATACTTTGCAGGTGCTATTTTTTTGGCTTGTTTTTAACTATGGTAT
AGTGAATTTTGCCTCAAATA

Product: stearoyl-CoA 9-desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Fatty Acid Desaturase Protein

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MTSAPLKAPINWTASITLIGLPILAAIIIPIYAYYYDFSVSAWVSLFFLLALSSMGITAGYHRLWAHRAYEASLPLKILL
MIGGTFAVQNSILFWASGHRTHHRHVDDVDEDPYSIERGFWYAHMGWMIRDHSPSEPDFKNAPDLLNDKLVMFQHKYYAL
MVVAVHVGILGLVGWATGDLWGVVLLGGLLRLIISHQVTFFINSLCHMFGKRPYTDENSARDNFWLAIATWGEGYHNYHH
IFQYDYRNGVKWWQYDPTKWLIWTCSKIGLAKNLRRIPSFNIKKAELAMKFKYAEQDLAIYGHDVNADISQMKQRIAQEY
EAFTHTLNDWAKLKEQELQAKKAAMAEKIHKMDHKLKVDFQLLEHRLSHHRECLETLMRNIKKNTNVVPD

Sequences:

>Translated_390_residues
MTSAPLKAPINWTASITLIGLPILAAIIIPIYAYYYDFSVSAWVSLFFLLALSSMGITAGYHRLWAHRAYEASLPLKILL
MIGGTFAVQNSILFWASGHRTHHRHVDDVDEDPYSIERGFWYAHMGWMIRDHSPSEPDFKNAPDLLNDKLVMFQHKYYAL
MVVAVHVGILGLVGWATGDLWGVVLLGGLLRLIISHQVTFFINSLCHMFGKRPYTDENSARDNFWLAIATWGEGYHNYHH
IFQYDYRNGVKWWQYDPTKWLIWTCSKIGLAKNLRRIPSFNIKKAELAMKFKYAEQDLAIYGHDVNADISQMKQRIAQEY
EAFTHTLNDWAKLKEQELQAKKAAMAEKIHKMDHKLKVDFQLLEHRLSHHRECLETLMRNIKKNTNVVPD
>Mature_389_residues
TSAPLKAPINWTASITLIGLPILAAIIIPIYAYYYDFSVSAWVSLFFLLALSSMGITAGYHRLWAHRAYEASLPLKILLM
IGGTFAVQNSILFWASGHRTHHRHVDDVDEDPYSIERGFWYAHMGWMIRDHSPSEPDFKNAPDLLNDKLVMFQHKYYALM
VVAVHVGILGLVGWATGDLWGVVLLGGLLRLIISHQVTFFINSLCHMFGKRPYTDENSARDNFWLAIATWGEGYHNYHHI
FQYDYRNGVKWWQYDPTKWLIWTCSKIGLAKNLRRIPSFNIKKAELAMKFKYAEQDLAIYGHDVNADISQMKQRIAQEYE
AFTHTLNDWAKLKEQELQAKKAAMAEKIHKMDHKLKVDFQLLEHRLSHHRECLETLMRNIKKNTNVVPD

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596961, Length=247, Percent_Identity=38.0566801619433, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI53759151, Length=275, Percent_Identity=34.9090909090909, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI148596938, Length=111, Percent_Identity=40.5405405405405, Blast_Score=99, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17561774, Length=292, Percent_Identity=34.9315068493151, Blast_Score=157, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI17540878, Length=249, Percent_Identity=35.3413654618474, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17561776, Length=279, Percent_Identity=33.6917562724014, Blast_Score=152, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6321383, Length=282, Percent_Identity=38.6524822695035, Blast_Score=218, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24646500, Length=258, Percent_Identity=35.2713178294574, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24646303, Length=264, Percent_Identity=34.469696969697, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24646299, Length=264, Percent_Identity=34.469696969697, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24646305, Length=264, Percent_Identity=34.469696969697, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24646301, Length=264, Percent_Identity=34.469696969697, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24646297, Length=264, Percent_Identity=34.469696969697, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI21358573, Length=266, Percent_Identity=34.5864661654135, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24646295, Length=295, Percent_Identity=34.2372881355932, Blast_Score=151, Evalue=8e-37,
Organism=Drosophila melanogaster, GI24662393, Length=279, Percent_Identity=32.6164874551971, Blast_Score=144, Evalue=9e-35,
Organism=Drosophila melanogaster, GI21358571, Length=249, Percent_Identity=30.1204819277108, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24651333, Length=273, Percent_Identity=29.3040293040293, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI161079187, Length=273, Percent_Identity=29.3040293040293, Blast_Score=86, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45221; Mature: 45090

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAPLKAPINWTASITLIGLPILAAIIIPIYAYYYDFSVSAWVSLFFLLALSSMGITAG
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH
YHRLWAHRAYEASLPLKILLMIGGTFAVQNSILFWASGHRTHHRHVDDVDEDPYSIERGF
HHHHHHHHHHCCCCCCEEEEECCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHCCE
WYAHMGWMIRDHSPSEPDFKNAPDLLNDKLVMFQHKYYALMVVAVHVGILGLVGWATGDL
EEEEECEEEECCCCCCCCCCCCCHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGVVLLGGLLRLIISHQVTFFINSLCHMFGKRPYTDENSARDNFWLAIATWGEGYHNYHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHH
IFQYDYRNGVKWWQYDPTKWLIWTCSKIGLAKNLRRIPSFNIKKAELAMKFKYAEQDLAI
EEEEECCCCCEEEEECCCEEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEE
YGHDVNADISQMKQRIAQEYEAFTHTLNDWAKLKEQELQAKKAAMAEKIHKMDHKLKVDF
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLEHRLSHHRECLETLMRNIKKNTNVVPD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSAPLKAPINWTASITLIGLPILAAIIIPIYAYYYDFSVSAWVSLFFLLALSSMGITAG
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH
YHRLWAHRAYEASLPLKILLMIGGTFAVQNSILFWASGHRTHHRHVDDVDEDPYSIERGF
HHHHHHHHHHCCCCCCEEEEECCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHCCE
WYAHMGWMIRDHSPSEPDFKNAPDLLNDKLVMFQHKYYALMVVAVHVGILGLVGWATGDL
EEEEECEEEECCCCCCCCCCCCCHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGVVLLGGLLRLIISHQVTFFINSLCHMFGKRPYTDENSARDNFWLAIATWGEGYHNYHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHH
IFQYDYRNGVKWWQYDPTKWLIWTCSKIGLAKNLRRIPSFNIKKAELAMKFKYAEQDLAI
EEEEECCCCCEEEEECCCEEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEE
YGHDVNADISQMKQRIAQEYEAFTHTLNDWAKLKEQELQAKKAAMAEKIHKMDHKLKVDF
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLEHRLSHHRECLETLMRNIKKNTNVVPD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA