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The map label for this gene is ugpQ [H]

Identifier: 213157891

GI number: 213157891

Start: 3488188

End: 3488901

Strand: Direct

Name: ugpQ [H]

Synonym: AB57_3383

Alternate gene names: 213157891

Gene position: 3488188-3488901 (Clockwise)

Preceding gene: 213157890

Following gene: 213157893

Centisome position: 86.12

GC content: 39.5

Gene sequence:

>714_bases
ATGCGCATTATTGGTCATCGTGGTGCACGCCGAGAAGCTCCTGAAAATACATTAGGTGGTTTTCAGCACATTAAAAATTT
AGGTATTCGTGGTGTCGAATTTGATATTCGTCAGCTGCAAGATCAAGAGTTGGTCGTCATTCATGATGATAATTTTTTGC
GCACGGCAGGTGTCGACCAGATTGTAGAGCAATCAACATTGGCTCAAGCATTATCATTTGATCATCGTCAAAATTGGCCT
AACTGGCCAACCTCTGAACCAACCCCTACGCTTACAGATGTTTTAAATTTACTTGATAACTTTGATCATATTGAAGTTGA
AGTTAAAGCTGTAAGAGATATGGCATTAGCAGAAAAGTTAGTTCAAAAGCTTGAGACTGAGTTACAAGGTTTCGAGAAAG
TCGTGACCATCACAAGTTTTGATCTTCAAATTCTAACCACTTTACGTGATACCAACTCTCAATTTAAACGCGGATTGTTA
GTTGAACTTCCGGTTGGAGCAACGGCGATTGAACTTGCTCATCAATATGGGTGCTGTCATATTGGCTGGCATGATCAACT
TGCAACAGATGAAATGATTCAATTGTCTCATCAAGCTGGTTTGAACATTAGTGTCTGGACAGTGAACGATGTAGAAAGAG
CAAAGAGACTACAGGATTTAGATATTCAGGGCTTAATTACAGATATTCCAACCACAATGCTTGAAGCTCTTTAA

Upstream 100 bases:

>100_bases
GCAAAAAAATATTAATGAGATGATTTAAAAATAGATTAAGTTAAGAAAGATCTCTACGTTTAAAGAGATCATTATCAAAA
AGAACGGACAATAGAAATCT

Downstream 100 bases:

>100_bases
ATATAAAAAAGGTGGTATTGACCACCTTTTATTTTTTCTCGGCCTGAATCAAACGCTGTCCGCTTTGATCAAGTAGATAT
AAGGTATTACCTACTAACTG

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MRIIGHRGARREAPENTLGGFQHIKNLGIRGVEFDIRQLQDQELVVIHDDNFLRTAGVDQIVEQSTLAQALSFDHRQNWP
NWPTSEPTPTLTDVLNLLDNFDHIEVEVKAVRDMALAEKLVQKLETELQGFEKVVTITSFDLQILTTLRDTNSQFKRGLL
VELPVGATAIELAHQYGCCHIGWHDQLATDEMIQLSHQAGLNISVWTVNDVERAKRLQDLDIQGLITDIPTTMLEAL

Sequences:

>Translated_237_residues
MRIIGHRGARREAPENTLGGFQHIKNLGIRGVEFDIRQLQDQELVVIHDDNFLRTAGVDQIVEQSTLAQALSFDHRQNWP
NWPTSEPTPTLTDVLNLLDNFDHIEVEVKAVRDMALAEKLVQKLETELQGFEKVVTITSFDLQILTTLRDTNSQFKRGLL
VELPVGATAIELAHQYGCCHIGWHDQLATDEMIQLSHQAGLNISVWTVNDVERAKRLQDLDIQGLITDIPTTMLEAL
>Mature_237_residues
MRIIGHRGARREAPENTLGGFQHIKNLGIRGVEFDIRQLQDQELVVIHDDNFLRTAGVDQIVEQSTLAQALSFDHRQNWP
NWPTSEPTPTLTDVLNLLDNFDHIEVEVKAVRDMALAEKLVQKLETELQGFEKVVTITSFDLQILTTLRDTNSQFKRGLL
VELPVGATAIELAHQYGCCHIGWHDQLATDEMIQLSHQAGLNISVWTVNDVERAKRLQDLDIQGLITDIPTTMLEAL

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1789858, Length=229, Percent_Identity=27.5109170305677, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 26790; Mature: 26790

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIGHRGARREAPENTLGGFQHIKNLGIRGVEFDIRQLQDQELVVIHDDNFLRTAGVDQ
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCEEECCCHHH
IVEQSTLAQALSFDHRQNWPNWPTSEPTPTLTDVLNLLDNFDHIEVEVKAVRDMALAEKL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
VQKLETELQGFEKVVTITSFDLQILTTLRDTNSQFKRGLLVELPVGATAIELAHQYGCCH
HHHHHHHHHHHHHHHEEEECHHHHHHHHHHCHHHHHCCEEEEECCCHHHHHHHHHCCCEE
IGWHDQLATDEMIQLSHQAGLNISVWTVNDVERAKRLQDLDIQGLITDIPTTMLEAL
CCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIIGHRGARREAPENTLGGFQHIKNLGIRGVEFDIRQLQDQELVVIHDDNFLRTAGVDQ
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCEEECCCHHH
IVEQSTLAQALSFDHRQNWPNWPTSEPTPTLTDVLNLLDNFDHIEVEVKAVRDMALAEKL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
VQKLETELQGFEKVVTITSFDLQILTTLRDTNSQFKRGLLVELPVGATAIELAHQYGCCH
HHHHHHHHHHHHHHHEEEECHHHHHHHHHHCHHHHHCCEEEEECCCHHHHHHHHHCCCEE
IGWHDQLATDEMIQLSHQAGLNISVWTVNDVERAKRLQDLDIQGLITDIPTTMLEAL
CCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]