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The map label for this gene is ynfA [C]

Identifier: 213157552

GI number: 213157552

Start: 2328064

End: 2328426

Strand: Reverse

Name: ynfA [C]

Synonym: AB57_2243

Alternate gene names: 213157552

Gene position: 2328426-2328064 (Counterclockwise)

Preceding gene: 213157553

Following gene: 213157551

Centisome position: 57.48

GC content: 39.94

Gene sequence:

>363_bases
ATGTTAATTGATAGTCTTTCTATAACCCGAATATTTAGTGTGTTCGGGTTATTTATTATTACTGCAATCGCTGAGATTTT
GGGTTGTTACTTTCCTTATCTTATTTTAAAAGAAGGGAAGTCTGTGTGGCTATGGTTACCTACAGCACTGAGTTTGGCCG
TGTTTGTCTGGTTGCTGACATTACATCCGGCAGCTTCTGGACGGATTTATGCAGCCTATGGCGGTATTTATATTTTTACT
GCGCTTATGTGGCTTCGTTTTGTAGATCAGGTCGCTTTAACCAGATGGGATATCTTGGGTGGCATAATCGTGCTTTGCGG
AGCAGGTTTAATTATTTTACAGCCACAAGGATTAATCCGTTAA

Upstream 100 bases:

>100_bases
CGGTAATGTGGCGGTATCAGTGAAGAAAGAAGATGGTAAAGCAGTGGGTCTAAAACTTGAAGTGTTTGAAGACCACCATA
CGGCAGAACCAGCTTAATTT

Downstream 100 bases:

>100_bases
TTCTGAGAGTGATTATTTAAATTTTAAGTGAAAAAATAAGCAATTTTTTCGCAAAAAATACTTGTCAAAGTCATCAACAA
TGCGTATTTTAGATTTAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLIDSLSITRIFSVFGLFIITAIAEILGCYFPYLILKEGKSVWLWLPTALSLAVFVWLLTLHPAASGRIYAAYGGIYIFT
ALMWLRFVDQVALTRWDILGGIIVLCGAGLIILQPQGLIR

Sequences:

>Translated_120_residues
MLIDSLSITRIFSVFGLFIITAIAEILGCYFPYLILKEGKSVWLWLPTALSLAVFVWLLTLHPAASGRIYAAYGGIYIFT
ALMWLRFVDQVALTRWDILGGIIVLCGAGLIILQPQGLIR
>Mature_120_residues
MLIDSLSITRIFSVFGLFIITAIAEILGCYFPYLILKEGKSVWLWLPTALSLAVFVWLLTLHPAASGRIYAAYGGIYIFT
ALMWLRFVDQVALTRWDILGGIIVLCGAGLIILQPQGLIR

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=96, Percent_Identity=62.5, Blast_Score=121, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 13347; Mature: 13347

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDSLSITRIFSVFGLFIITAIAEILGCYFPYLILKEGKSVWLWLPTALSLAVFVWLLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH
LHPAASGRIYAAYGGIYIFTALMWLRFVDQVALTRWDILGGIIVLCGAGLIILQPQGLIR
HCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
>Mature Secondary Structure
MLIDSLSITRIFSVFGLFIITAIAEILGCYFPYLILKEGKSVWLWLPTALSLAVFVWLLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH
LHPAASGRIYAAYGGIYIFTALMWLRFVDQVALTRWDILGGIIVLCGAGLIILQPQGLIR
HCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA