Click here to switch to the map view.

The map label for this gene is yfhR [C]

Identifier: 213157390

GI number: 213157390

Start: 2156774

End: 2157688

Strand: Direct

Name: yfhR [C]

Synonym: AB57_2079

Alternate gene names: 213157390

Gene position: 2156774-2157688 (Clockwise)

Preceding gene: 213157389

Following gene: 213157394

Centisome position: 53.25

GC content: 42.4

Gene sequence:

>915_bases
ATGCAAGATATTAAATTCATAAGTCAAGGTATTACCTGTGCAGCTTGGTATATACCTGCAACTACAGACAAATTTATAAA
TGATAATGGACGACCATGTATTGTTATGGCACATGGTTTTGGAGGAACACGCGATACAGGCCTTTTAGAATTTGCTAAAC
CATTTAGTGAAGCTGGTATTGATGCCTTTATCTTCGATTATCGTGGATTCGGGGATTCAGGAGGAATACCTCGCCAAGAT
GTATCTTACCTGCGCCAACGTGAAGATTATCATGCAGCAATTGCTGCAGCACGAGGTTTACCTAATGTAGATGAAACTCG
TATTGCAATTTGGGGGACGTCTTATTCTGGAGGCCACGTTTTAGTCGCTGCGGCCCAAGATCAGAAAATATCTGCAGTAA
TCTCTATGAACCCGGCTACAGATGGTTTAGCTGCCCTCTCACAAATCTGCCGTTATGGTGGTCTAAAACAATTAACCGTT
GCAGTCGCTCATGGACTAAAAGATTTAGCTTATTCTCTTTTAGGCCAAAAAGCGCATCTTATTCCAATCGTGGGGCAACC
GGGCACGGCGGCCATCATTAGTACACCTGGCTCGGAGGTCTCCTATAAAGCCATGGCTGGGCCAACATGGCGGAATGAAG
TATGTGCACGAACTGCTTTAGAGGTTGCAAGAAATCGGCCCATTAATTTCGCCCATCAAATAAAGTGTCCTTTATTGGTA
CAAGTGGGTTCAAATGATCAAGTTACTCCTCCTGAAGCTGCTCGCAAGTCGGCAAGCTTAGCAAATGGAGAAGTTAAATT
ACTTGAATATCCGATTGATCATTTTGATTTTTATAATGAACCGTGGCAAATAAAAATTTTAGAGGACCAAATTAATTTTT
TAACTCAAGCCTTGGCTCGTCCCCGTGTTAGATAA

Upstream 100 bases:

>100_bases
TAAGCAAATTAAAGCACAAGCTTAATTTTCAACTTTCTTGATCTCTTATTTGAAAAGGCTATCGAAATGGGAGATTTAAG
ATCGATAAATCGAGATTCTT

Downstream 100 bases:

>100_bases
CATGATTTCATAGCAATATTAGACCATCTAAAGCAAAAATAAGCTGATTTGGAATACCTCTATCAGCTTATTTTTTTAAG
AGTGAAACTTTATTAGACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MQDIKFISQGITCAAWYIPATTDKFINDNGRPCIVMAHGFGGTRDTGLLEFAKPFSEAGIDAFIFDYRGFGDSGGIPRQD
VSYLRQREDYHAAIAAARGLPNVDETRIAIWGTSYSGGHVLVAAAQDQKISAVISMNPATDGLAALSQICRYGGLKQLTV
AVAHGLKDLAYSLLGQKAHLIPIVGQPGTAAIISTPGSEVSYKAMAGPTWRNEVCARTALEVARNRPINFAHQIKCPLLV
QVGSNDQVTPPEAARKSASLANGEVKLLEYPIDHFDFYNEPWQIKILEDQINFLTQALARPRVR

Sequences:

>Translated_304_residues
MQDIKFISQGITCAAWYIPATTDKFINDNGRPCIVMAHGFGGTRDTGLLEFAKPFSEAGIDAFIFDYRGFGDSGGIPRQD
VSYLRQREDYHAAIAAARGLPNVDETRIAIWGTSYSGGHVLVAAAQDQKISAVISMNPATDGLAALSQICRYGGLKQLTV
AVAHGLKDLAYSLLGQKAHLIPIVGQPGTAAIISTPGSEVSYKAMAGPTWRNEVCARTALEVARNRPINFAHQIKCPLLV
QVGSNDQVTPPEAARKSASLANGEVKLLEYPIDHFDFYNEPWQIKILEDQINFLTQALARPRVR
>Mature_304_residues
MQDIKFISQGITCAAWYIPATTDKFINDNGRPCIVMAHGFGGTRDTGLLEFAKPFSEAGIDAFIFDYRGFGDSGGIPRQD
VSYLRQREDYHAAIAAARGLPNVDETRIAIWGTSYSGGHVLVAAAQDQKISAVISMNPATDGLAALSQICRYGGLKQLTV
AVAHGLKDLAYSLLGQKAHLIPIVGQPGTAAIISTPGSEVSYKAMAGPTWRNEVCARTALEVARNRPINFAHQIKCPLLV
QVGSNDQVTPPEAARKSASLANGEVKLLEYPIDHFDFYNEPWQIKILEDQINFLTQALARPRVR

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjY [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 33028; Mature: 33028

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDIKFISQGITCAAWYIPATTDKFINDNGRPCIVMAHGFGGTRDTGLLEFAKPFSEAGI
CCCHHHHHCCCEEEEEEECCCCHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCC
DAFIFDYRGFGDSGGIPRQDVSYLRQREDYHAAIAAARGLPNVDETRIAIWGTSYSGGHV
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEE
LVAAAQDQKISAVISMNPATDGLAALSQICRYGGLKQLTVAVAHGLKDLAYSLLGQKAHL
EEEECCCCEEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEE
IPIVGQPGTAAIISTPGSEVSYKAMAGPTWRNEVCARTALEVARNRPINFAHQIKCPLLV
EEEECCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEE
QVGSNDQVTPPEAARKSASLANGEVKLLEYPIDHFDFYNEPWQIKILEDQINFLTQALAR
EECCCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCEEEEEEHHHHHHHHHHHHC
PRVR
CCCC
>Mature Secondary Structure
MQDIKFISQGITCAAWYIPATTDKFINDNGRPCIVMAHGFGGTRDTGLLEFAKPFSEAGI
CCCHHHHHCCCEEEEEEECCCCHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCC
DAFIFDYRGFGDSGGIPRQDVSYLRQREDYHAAIAAARGLPNVDETRIAIWGTSYSGGHV
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEE
LVAAAQDQKISAVISMNPATDGLAALSQICRYGGLKQLTVAVAHGLKDLAYSLLGQKAHL
EEEECCCCEEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEE
IPIVGQPGTAAIISTPGSEVSYKAMAGPTWRNEVCARTALEVARNRPINFAHQIKCPLLV
EEEECCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEE
QVGSNDQVTPPEAARKSASLANGEVKLLEYPIDHFDFYNEPWQIKILEDQINFLTQALAR
EECCCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCEEEEEEHHHHHHHHHHHHC
PRVR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916281 [H]