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The map label for this gene is yafE [H]

Identifier: 213157221

GI number: 213157221

Start: 1994825

End: 1995592

Strand: Direct

Name: yafE [H]

Synonym: AB57_1905

Alternate gene names: 213157221

Gene position: 1994825-1995592 (Clockwise)

Preceding gene: 213157220

Following gene: 213157223

Centisome position: 49.25

GC content: 33.07

Gene sequence:

>768_bases
ATGTTGAATCAACATGAGATAAATTTAAAACAGTATCAAAATAAATCTTTAAGTTATTTGAATAGCACCGCTCACTCTGA
AGGGGTCGAGTTTGATAAATTCATTAAAGAAATTGATGAATATCCAAATGCCGTTGTTTTAGATTTAGGTTGCGGTGGTG
GTCATGTAGCTTATAACGTTGCTCGCCATGCAGATCTGGTTTTTGCTTATGATTTATCTCATGAAATGCTCGATACAGTG
TCAAAAGCTGCCAATGCTCGAAAAATAAAAAATATTTTTGTACAGCAAGGTATTGCTGAAGATATGCCTTTTACTGATGA
ACAATTTGATGTAATCATTAGTCGTTATTCTGCCCATCATTGGCAGCATGTCCCAACAGCAATGAAAGAAATAAATCGTG
TATTAAAGCCAAATGGCACTGTTATTTTTGTTGATATTATTAGCTCAAGTTTCCCTATTTTAGATACATTTTTACAGACT
ATAGAAGTGATTCGAGACCCTAGTCATGTAAGAAATTACAGTATTAAAGACTGGGTTCACTTTATTGAAGATGCTGGTTT
TGAATTAACAATTTTAGAAAAACAAACCCTCAAACTAGATTTTGATAGTTGGGTACAGCGCATGAAGACACCTGAAGATC
AAATAAAAACCCTTAGGTATCTCCAAGAAAATGCAGCAGATGTTGTTAAAAAGTATTTTAATATTCAAAAAGATGGAAGT
TTTGAAAGTAAGGTCGGGTACTTTGTATTTAAAAAACTATCCTTCTAG

Upstream 100 bases:

>100_bases
ACAAACTATAACTTTATTTTATTAATTATTGAAAAACTAATCATTATTTTTTATCTACTTTTTCTTTTATGGTTAACTCA
TCAAAGAAGAGGAATAAGCC

Downstream 100 bases:

>100_bases
TGAGTCTAAGCTTGGATTTGTGTTCATAGAGAAAATGTTAGATAAAAGCCCTCATATAGAGGGCTTTTTTATGCCTAAAT
TTAGATTTTTGTTGAACGCT

Product: UbiE/COQ5 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MLNQHEINLKQYQNKSLSYLNSTAHSEGVEFDKFIKEIDEYPNAVVLDLGCGGGHVAYNVARHADLVFAYDLSHEMLDTV
SKAANARKIKNIFVQQGIAEDMPFTDEQFDVIISRYSAHHWQHVPTAMKEINRVLKPNGTVIFVDIISSSFPILDTFLQT
IEVIRDPSHVRNYSIKDWVHFIEDAGFELTILEKQTLKLDFDSWVQRMKTPEDQIKTLRYLQENAADVVKKYFNIQKDGS
FESKVGYFVFKKLSF

Sequences:

>Translated_255_residues
MLNQHEINLKQYQNKSLSYLNSTAHSEGVEFDKFIKEIDEYPNAVVLDLGCGGGHVAYNVARHADLVFAYDLSHEMLDTV
SKAANARKIKNIFVQQGIAEDMPFTDEQFDVIISRYSAHHWQHVPTAMKEINRVLKPNGTVIFVDIISSSFPILDTFLQT
IEVIRDPSHVRNYSIKDWVHFIEDAGFELTILEKQTLKLDFDSWVQRMKTPEDQIKTLRYLQENAADVVKKYFNIQKDGS
FESKVGYFVFKKLSF
>Mature_255_residues
MLNQHEINLKQYQNKSLSYLNSTAHSEGVEFDKFIKEIDEYPNAVVLDLGCGGGHVAYNVARHADLVFAYDLSHEMLDTV
SKAANARKIKNIFVQQGIAEDMPFTDEQFDVIISRYSAHHWQHVPTAMKEINRVLKPNGTVIFVDIISSSFPILDTFLQT
IEVIRDPSHVRNYSIKDWVHFIEDAGFELTILEKQTLKLDFDSWVQRMKTPEDQIKTLRYLQENAADVVKKYFNIQKDGS
FESKVGYFVFKKLSF

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=196, Percent_Identity=45.9183673469388, Blast_Score=199, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 29460; Mature: 29460

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNQHEINLKQYQNKSLSYLNSTAHSEGVEFDKFIKEIDEYPNAVVLDLGCGGGHVAYNV
CCCCCCCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
ARHADLVFAYDLSHEMLDTVSKAANARKIKNIFVQQGIAEDMPFTDEQFDVIISRYSAHH
HHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
WQHVPTAMKEINRVLKPNGTVIFVDIISSSFPILDTFLQTIEVIRDPSHVRNYSIKDWVH
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHCCCHHHHHH
FIEDAGFELTILEKQTLKLDFDSWVQRMKTPEDQIKTLRYLQENAADVVKKYFNIQKDGS
HHHHCCCEEEEEECHHEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FESKVGYFVFKKLSF
CHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNQHEINLKQYQNKSLSYLNSTAHSEGVEFDKFIKEIDEYPNAVVLDLGCGGGHVAYNV
CCCCCCCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
ARHADLVFAYDLSHEMLDTVSKAANARKIKNIFVQQGIAEDMPFTDEQFDVIISRYSAHH
HHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
WQHVPTAMKEINRVLKPNGTVIFVDIISSSFPILDTFLQTIEVIRDPSHVRNYSIKDWVH
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHCCCHHHHHH
FIEDAGFELTILEKQTLKLDFDSWVQRMKTPEDQIKTLRYLQENAADVVKKYFNIQKDGS
HHHHCCCEEEEEECHHEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FESKVGYFVFKKLSF
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]