Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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The map label for this gene is dnaE

Identifier: 212636262

GI number:

Start: 3707774

End: 3711244

Strand: Reverse

Name: dnaE

Synonym: swp_3506

Alternate gene names: NA

Gene position: NA

Preceding gene: 212636263

Following gene: 212636261

Centisome position: NA

GC content: NA

Gene sequence:

>3471_bases
ATGTCTGATCCTTTATTTGTGCATTTGCGCGTCCATAGTGACTTTTCAATGTCTGATGGGCTGTCCAAGGTTAAACCTAT
TCTTGCTAAAGTGAGCGAGCTTGGGATGCCTGCAGTGGCGTTGACGGATCAGACTAATATGTGTGGACTGGTAAAATTTT
ACGGCGGCTGTCATGGTGCCGGAATAAAACCCATCATCGGCACTGAGTTTTGGGTACAAGTGCCGGGCGTCGATGAGCTT
TGTTCTATTACTGCAATTGCAATGAATAATGAAGGTTATTCGAGCTTAACGCTACTGATCAGTGATGCTTATCTTCGCGG
CCATATTGATGATAGAGCAGTGATTGATCATGAGTGGTTAGCTAAGTATAACGACGGTTTGATTTTACTCTCTGGTGGAC
GCCATGGTGATGTTGGTCGAGCGTTACTAAAAGACAACAAGGCTCAAGTTGATTCCCTAATTGAATTTTATCAAACACAC
TTTCCTGACCGTTATTACCTAGAATTGTTACGCACCGGTCGTCCAGATGAAGAGCGTTACTTGCATATGGCTGTGGAGTT
AGCACAGGCAAAGGATTTACCTGTCGTTGCTACCAACCAAGTGGTGTTTAATAAACCTGAACAGTTTGAAGCCCATGAAA
TTCGGGTGGCGATCTCCGATGGTTTTACGCTAGCCGATCCTCGCAGACCTAAAAAATACAGTGATCAGCAGTATTTTAAG
AGTAGTGAAGAGATGTGCGAATTGTTCGAGGATATTCCAGAAGCAATTCAAAACACCGTTGAGATCGCCAAGCGTTGTAA
CGTTACTGTGCGTTTGAATGAATATTTCCTGCCTAACTTTCCTACTGGCGATTTGACCATTGAAGACTTTTTGGTCGATG
TTTCTGAAAAAGGACTTGAGGAACGTTTAGAGTTTTTGTTTCCTGATCCAGAAGTAAGAGCTGAAAAACGACCAGAATAC
GATGAACGTTTAGATATTGAACTTAAAGTTATTAACGAGATGGGTTTCCCTGGCTACTTCCTGATTGTCATGGAGTTTAT
TCAATGGGGTAAAGATAATGATATCCCTATTGGCCCTGGTCGAGGTTCGGGAGCGGGGTCGCTAGTGGCCTATGCTCTCA
AAATTACCGATCTTGATCCATTAGAGTATGATCTACTATTCGAACGATTTCTTAACCCTGAGCGTGTATCTATGCCGGAT
TTCGACGTCGATTTCTGTATGGATCGTCGAGATGAGGTTATTGACCACGTGGCCGATCTTTACGGCCGTGATGCGGTATC
GCAGATTATTACCTTCGGTACCATGGCGGCTAAAGCGGTAATACGAGATGTGGGTCGTGTGCAAGGACACCCTTACGGTT
TTGTCGATAGGATCTCTAAGATGATCCCTGCTGAGCCTGGCATGACGCTGGCTAAAGCATTTGAAGTCGAACCCGCTTTG
CAGGAGTCCTACGATGGCAGCGAGGAGGTTAAAGACCTTATCGATATGTGTCGGATTTTGGAAGGTGTTACCCGTAACGC
TGGTAAGCACGCCGGTGGTGTTGTTATCGCGCCGACCAAAATTACTGATTTCTCCCCTATTTACTGTGACTCCGAAGGGC
TTAACCCTGTTACTCAGTTCGATAAAAACGATGTAGAAACCGCGGGTCTGGTTAAGTTCGATTTCTTAGGGTTAAGAACG
CTCACCATTATTGATTGGGCGTTGCAGATGGTGAACGCCGTTAAAGACAAGAATGGCGAAGATCGCGTGCGAATTGAGTC
TATTTCGCTGACAGATCCTAAGTGTTTTAAGTTATTACAACGCTACGAAACGACAGCGGTATTCCAGCTTGAATCCCGTG
GTATGAAGGATTTGATTAAGCGTCTTCAGCCTGACTGCTTTGAAGATATGATTGCATTGGTAGCATTGTTTAGACCCGGC
CCTTTGCAGTCAGGCATGGTAGATAACTTCATTGAGCGTAAGCATGGTCGCGAAGAAGTCTCTTACCCTGATGCTGAGTA
CCAGCACGAATCACTTAAAGAATTACTGTCGCCAACTTACGGTATTATTTTATATCAAGAGCAAGTGATGCAAATTGCTC
AGGTATTGGCGGGTTATACTTTGGGCGGCGCCGATATGTTGCGTCGAGCGATGGGTAAGAAAAAGCCTGAGGAGATGGCT
AAGCAGCGCGGTACTTTCGAAGAGGGATCGATTAAAAACGGCGTTGATGGTCCATTGTCGATGAAGATCTTCGATCTGGT
AGAAAAGTTTGCGGGTTACGGTTTTAACAAATCACACTCTGCAGCCTACGCGTTGGTGTCATACCAGACTCTTTGGTTAA
AGACTCATTATCCGTCGCAGTTTATGGCAGCGGTTATGTCTGCGGATATGGATAATACCGACAAGATCGTGACTTTGGTT
GATGAGTGCGAACGTATGGGATTACCGCTGATCCCACCTGATGTGAATAAGGGCTTGTTTAGATTCACTGTCGATGACGA
TCTTAATATTGTTTACGGTATTGGTGCGGTTAAAGGGGTGGGTGAAGGTCCTGTTGACTCGATACTAGAGGCCAGAAAAG
ATGGTCCATTTACTGACTTATTTGATTTTTGTGCCCGAATTGATCTTAAAAAACTTAATCGTCGCGTGATTGAAAAGCTC
ATTTGCGCGGGAGCATTGGACAATCTTGGCCCACACCGAGCCGCGTTGGTAGCCACGCTACCAGAAGCTATTCGCGCAGC
AGACCAACATGCTAAAGCAGAGGCAATTGGTCAGCATGATATGTTTGGTTTATTAAATAATGAGCCAGAAGATGACAAAC
AGCAGTTCGTTGATTGTACACCGTGGCCAGATAAAGTTTGGTTAGAGGGAGAGCGGGACACACTCGGTTTGTATTTAACT
GGCCACCCGATTAATCAGTATCTCAAAGAACTTAAGCATTACACATCTGGGCGCCTGAAAGATGTGCACCCAACTGAACG
CGGAAAAACCGTGAAAGCGGCAGGGCTTGTGGTCGCCACTCGGGTTATGATGACCAAGCGTGGCGCTAAAATGGGCTTAG
TGACCTTGGATGATAAAAGTGCACGCTTAGAGGTAATGTTATTTACCGAAGCGTTCGAGAAATTTAACCACTTGCTTGAA
AAAGACCGTATTTTGATTATTGAAGGCGAAGTCAGTTTCGATGACTTCTCCGGCGGTAACCGCATGACTGCACGTAACAT
TATTGATATGGGCGAAGCGCGCAGCCACTTTGCAAATGCGGTTGAAGTTGACTTGCAGTCAACAGAGGTTGATGGAGACT
GGTTAAACCGTTTTCAGGCAGCAGTTGAGCCATGGAAAAATGGCGCTGTACCAGTGTTAATCAATTACGCCCAGCCAGAA
ACTAGGGCGCAGTTTGCACTAGGTGATGAATGGCGGGTGAACCCAACCGATGATTTGATGTTGGCGCTTGAGTCATTAAC
AGGCTCAAACAAAGTTCGGATTGTCTTTTAA

Upstream 100 bases:

>100_bases
TGTCTAGATTAGCGGTTTCGCTTGTTTGCTGCTAGTCCATGTTTTACTCTGTAATATTGACTATTTGTCTTCATCTACCT
AAAAGAAAGATACTCCATAT

Downstream 100 bases:

>100_bases
GTTATGGATATTGCAGAGCTGATCCAACACTGTATCGACGAATTACCATCGATTGATTTGAGCCAAAAGCCCCGTAAAAT
CGTGTTGGCTTATAGTGGCG

Product: DNA polymerase III subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1156_residues
MSDPLFVHLRVHSDFSMSDGLSKVKPILAKVSELGMPAVALTDQTNMCGLVKFYGGCHGAGIKPIIGTEFWVQVPGVDEL
CSITAIAMNNEGYSSLTLLISDAYLRGHIDDRAVIDHEWLAKYNDGLILLSGGRHGDVGRALLKDNKAQVDSLIEFYQTH
FPDRYYLELLRTGRPDEERYLHMAVELAQAKDLPVVATNQVVFNKPEQFEAHEIRVAISDGFTLADPRRPKKYSDQQYFK
SSEEMCELFEDIPEAIQNTVEIAKRCNVTVRLNEYFLPNFPTGDLTIEDFLVDVSEKGLEERLEFLFPDPEVRAEKRPEY
DERLDIELKVINEMGFPGYFLIVMEFIQWGKDNDIPIGPGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPD
FDVDFCMDRRDEVIDHVADLYGRDAVSQIITFGTMAAKAVIRDVGRVQGHPYGFVDRISKMIPAEPGMTLAKAFEVEPAL
QESYDGSEEVKDLIDMCRILEGVTRNAGKHAGGVVIAPTKITDFSPIYCDSEGLNPVTQFDKNDVETAGLVKFDFLGLRT
LTIIDWALQMVNAVKDKNGEDRVRIESISLTDPKCFKLLQRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPG
PLQSGMVDNFIERKHGREEVSYPDAEYQHESLKELLSPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEMA
KQRGTFEEGSIKNGVDGPLSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPSQFMAAVMSADMDNTDKIVTLV
DECERMGLPLIPPDVNKGLFRFTVDDDLNIVYGIGAVKGVGEGPVDSILEARKDGPFTDLFDFCARIDLKKLNRRVIEKL
ICAGALDNLGPHRAALVATLPEAIRAADQHAKAEAIGQHDMFGLLNNEPEDDKQQFVDCTPWPDKVWLEGERDTLGLYLT
GHPINQYLKELKHYTSGRLKDVHPTERGKTVKAAGLVVATRVMMTKRGAKMGLVTLDDKSARLEVMLFTEAFEKFNHLLE
KDRILIIEGEVSFDDFSGGNRMTARNIIDMGEARSHFANAVEVDLQSTEVDGDWLNRFQAAVEPWKNGAVPVLINYAQPE
TRAQFALGDEWRVNPTDDLMLALESLTGSNKVRIVF

Sequences:
NA

Specific function: NA

COG id: COG0587

COG function: function code L; DNA polymerase III, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA