Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

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Identifier: 212634152

GI number:

Start: 1313283

End: 1316405

Strand: Direct

Name: Not Available

Synonym: swp_1301

Alternate gene names: NA

Gene position: NA

Preceding gene: 212634151

Following gene: 212634155

Centisome position: NA

GC content: NA

Gene sequence:

>3123_bases
ATGATTAGTCAATTCTTCATCAATAGGCCTAAATTTGCCTTTGTGATCTCTACCGTACTGACCTTGGTTGGGCTTATCTC
TATCCCTATCTTGTCGGTGGCTGAGTTCCCTGAAATCGCGCCGCCACAAGTCAGTGTGTCGACCAGCTATTCAGGTGCGA
GTGCCGATATTGTAAAAGACACCATTGGCCAACCTTTAGAAGCGGAAGTGAACGGCGTTGAAGGCATGCTGTACATGGAG
TCAAAGAGCGCCAATGACGGCAGTTATTCGCTCAACGTGACTTTTGAGGTGGGTACAGACCCTGACATGGCGCAGGTCAA
AGTGCAGAACCGGGTGCAACAAGCAATGCCAAGGCTACCTGAAGAGGTAAAAAGGCAGGGCGTAAAAGTTGAAAAGCAAA
GCCCAAATATATTGATGGTGGTCAACCTCGTTTCTCCTAACGAAACCTTTGACTCACTGTTTATAACCAACTACGCCGGA
CTCAACGTTAAAGATGCGTTAGCACGCCAAAACGGTGTGTCAAAAGTACAGATTATTGGTGCGTTAGATTACGCCATGCG
GATCTGGCTTGATCCTGATAAAATGGCCAGCTTTTCGATTACGGCAACCGATGTAATCGGCGCGCTACAAGAGCAAAATA
TTCAAGTGGCAGCAGGCCGAATCGGAGCCGCACCGGTTGACCCTGATCAGCAATTTCAATACACCTTGCAAACAAAAGGG
CGTTTGAAGAACCCGAAAGAGTTTGCAAACGTTGTTGTAAGAGCTAATGACGATGGTTCGAAAGTCATTGTTGGCGATGT
GGCACGGGTAGAGCTTGGCTCGCAAACCTATGACGCTCAAGGTAAGCTCAATAACAAGCCTTCGGCGATTATCTCTATCT
ATCAATCACCTGATGCCAATGCGCTAGACGTGGCAAAAGGTATTCGTGCGCAGATGGAAGCCTTGTCGGCAAACTTCCCC
AAAGATTTAGAATATGAAGTGCTCTACGACACCACTGAATTTGTTGAAACCTCCATTAAAGAAGTGGTGCAAACGCTGTT
TATCTCCGTTGCCTTGGTGATTTTTGTAGTGTTTATCTTCCTGCAAGATGTGCGCTCTACCCTTATTCCCGGCATCGCGA
TTCCGGTCTCTTTGATTGGTACCTTTGCCTTCTTGCTGCTGTCAGGGATGAGCATCAATACAGTCTCGCTATTCGCACTT
ATCTTAGCCATTGGTATTGTGGTTGATGATGCCATTGTGGTGGTCGAGAACGTTACACGTCTAATGCAAGATGAGGGTTT
ATCACCTAAAGAAGCGACCTCTAAAGCGATGCAAGAGGTTACCGGGCCGATTATTGCGACCACATTGGTGTTGCTTGCTG
TATTTGCCCCTACAGCTGTGATGCCTGGGATCACTGGCCAGATGTATGCGCAGTTCTCTGTGACCATCTGTATCTCAGTG
CTTATCTCATCGGTTAATGCATTAACCTTAAGCCCAGCATTATGCGCCTCAGTATTGCGACCACCTAAAGAGCATACTCA
AGGTTTTCATGCCAAATTCAACAAGCACTTTAATGTCTTTACTGGCAAATACACCAAGTTAGTCCATGTGCTTACTCGCA
AGTTAACGCTAGTGCTGGTGGTATTTATTGCCCTGCTAGCAGCAACGGGAGGCTTAGCTAAAATCTTGCCATCGGGTTTT
GTGCCTATGGAAGATAAAAAGGCCTTTATGGTGGATATTCAACTTCCTGATGGCGCGTCATTAAACCGTACGGAAGATGT
GATGCGTGATTTGGTTGAGCTAACTTTAGCTGAACCGGGCGTTGAAAATGTCATTCATGCCAGTGGCTTTAGTATCCTAA
CAGGCTCAGTTGCATCAAACGGAGGTTTAATGATTGTGACCCTGTCGACTTGGTCTGAACGTGATACGCCAGATATGGCA
GAACATGCGATTGTGGCAAAGCTGCAGGCCAAATACGCTGCTAATCCGTCTGTGAAAGCGATGGCATTCTCGTTGCCGCC
TATTCCTGGCGTCGGTAGTGTGGGTGGCTTTGAATTTGTATTACAAGACACCCAGGGGCGTAGTCCGCAGGAGTTAGCAT
CTGTGATGCGCGCGCTCATTATGAAAGCCAATGAGCAGCCAGAAATTGCCATGTCCTTTAGTAATTTCCGCGCCGATGTA
CCGCAGATGTTTGTAGATGTTGACCGTGACAAAGCGAAGGCACTGGGCATACCACTGAACGAGATCTTCACCACTATGCA
GACCATGCTGGGTTCGATGTATGTCAATGACTTCAACCGCTTTGGTAAGGTCTTCAGAGTCATCTTGCAAGCTGAAGCTG
ATTTCCGTAACTCCGATATGGATATTGCCCGTTTCTACGTGCGCTCCTCGACGGGGGAGATGGTACCACTGAGTACCTTG
GTGACCGTGACACCGATCCTCGGGCCTGACGTGATGAACTCATACAACATGTTTAGCTCTACCACGATTAACGGCTTCCC
TGCGCCAGGTTTTAGCTCTGGTGACGCTATTAAGGCGATGGAACGTGCTGCAGCGCAAACATTGCCAACGGGTTACAGTT
ACGAGTGGACAGGGCAAACTTACCAAGAGATTAAAGCGGGTAACTTAGCGCCATTAATCTTCGCGTTAGCATTGGTATTT
ACCTACCTATTCTTGGTGGCACAATACGAGAGTTGGACCATTCCGTTTGCGGTTATGTTGGCGGTTCCGATTGCGATACT
GGGGGCGTTCCTCAATATCTGGCTGGTGGGCGCAGAGCTAAACCTATACGCGCAGATTGGATTGGTGCTATTGATAGGAC
TCGCCTGTAAGAATGCAATCTTGATTGTAGAGTTTGCTAAGCAATTAAGGGAAGAGGGCAAAAGTATTCTTGATGCGGGT
GAGACGGCTGCAAGATTACGTTTCCGTGCGGTATTAATGACCGCCTTCTCATTCCTACTCGGGGTATTACCGCTGGTGGT
AGCCACAGGTGCGGGGGCAGGTAGTCGCCGAGCACTGGGTTACTCGGTATTTGGCGGTATGTTAGCTGCAACAATAGTAG
GAACACTGTTAGTACCGGTTTTCTACGTGATGATGCAAACCCTACGTGAGAAGTTCAAAGGTGAGGCTAAGGTAGAAAGC
TAG

Upstream 100 bases:

>100_bases
CGACGGCCTGCAAAAGATCAGACCAGGTATTGAAGTGAACGCTGTGGAGCAAGAAATTGTTCCTTTTCAAGAAGCTAACC
AAACTAAGTAGGGGATTGCT

Downstream 100 bases:

>100_bases
CCTTAACAGAGGGCATTTCAAATTAGCTAACATTAAGGCCTGCAAAATTGTAGGCCTTTTTATTACTCTTGAGGGGAACA
AAGGCTGTTGCGCCTGAGTC

Product: multidrug efflux membrane fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1040_residues
MISQFFINRPKFAFVISTVLTLVGLISIPILSVAEFPEIAPPQVSVSTSYSGASADIVKDTIGQPLEAEVNGVEGMLYME
SKSANDGSYSLNVTFEVGTDPDMAQVKVQNRVQQAMPRLPEEVKRQGVKVEKQSPNILMVVNLVSPNETFDSLFITNYAG
LNVKDALARQNGVSKVQIIGALDYAMRIWLDPDKMASFSITATDVIGALQEQNIQVAAGRIGAAPVDPDQQFQYTLQTKG
RLKNPKEFANVVVRANDDGSKVIVGDVARVELGSQTYDAQGKLNNKPSAIISIYQSPDANALDVAKGIRAQMEALSANFP
KDLEYEVLYDTTEFVETSIKEVVQTLFISVALVIFVVFIFLQDVRSTLIPGIAIPVSLIGTFAFLLLSGMSINTVSLFAL
ILAIGIVVDDAIVVVENVTRLMQDEGLSPKEATSKAMQEVTGPIIATTLVLLAVFAPTAVMPGITGQMYAQFSVTICISV
LISSVNALTLSPALCASVLRPPKEHTQGFHAKFNKHFNVFTGKYTKLVHVLTRKLTLVLVVFIALLAATGGLAKILPSGF
VPMEDKKAFMVDIQLPDGASLNRTEDVMRDLVELTLAEPGVENVIHASGFSILTGSVASNGGLMIVTLSTWSERDTPDMA
EHAIVAKLQAKYAANPSVKAMAFSLPPIPGVGSVGGFEFVLQDTQGRSPQELASVMRALIMKANEQPEIAMSFSNFRADV
PQMFVDVDRDKAKALGIPLNEIFTTMQTMLGSMYVNDFNRFGKVFRVILQAEADFRNSDMDIARFYVRSSTGEMVPLSTL
VTVTPILGPDVMNSYNMFSSTTINGFPAPGFSSGDAIKAMERAAAQTLPTGYSYEWTGQTYQEIKAGNLAPLIFALALVF
TYLFLVAQYESWTIPFAVMLAVPIAILGAFLNIWLVGAELNLYAQIGLVLLIGLACKNAILIVEFAKQLREEGKSILDAG
ETAARLRFRAVLMTAFSFLLGVLPLVVATGAGAGSRRALGYSVFGGMLAATIVGTLLVPVFYVMMQTLREKFKGEAKVES

Sequences:
NA

Specific function: NA

COG id: COG0841

COG function: function code V; Cation/multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA