Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is 21245074

Identifier: 21245074

GI number: 21245074

Start: 5158184

End: 5159440

Strand: Reverse

Name: 21245074

Synonym: XAC4362

Alternate gene names: NA

Gene position: 5159440-5158184 (Counterclockwise)

Preceding gene: 21245075

Following gene: 21245073

Centisome position: 99.69

GC content: 65.63

Gene sequence:

>1257_bases
ATGCACCTGCGTTCGCTTTCGCTGTCTGTCGCGTTGTTGCTGGCCGCTGCGCTGCCTGCACAAGCGCTGGAGTTTTCCAA
GGCCGAACTGGCGCGCGCCACCGCCCTGCAGAAACGCCTGGTCACGCTGGATTCGCATCTGGACACGCCGGCCAATCTGG
AGCGCGCCGACTTCGACGTATTGCAGGCGCATAGGGGTAACCGCTTGTCGCAGGTGGATTACCCGCGCATGGTCGAAGGC
GCGCTGGATGGCGGGTTCTGGGCGGTCTACACGGGACAGGGCGATCGCAGTGCGGCCGCGCACCTGGACGATCGCGATGC
CGGTCTGCAGCGCTTGCTGAGGATCCACACATTGGTGGCCGCGCAATCGCAGCGTTTTGCACTGGCCACCACGCCGGCCG
ATGCCGCGCGCATCAAGGCCGCCGGCAAGCGCGTGGTGTACATCAGCATGGAAAACGCCAGCCCGCTGGTGGCCGATCCT
ACGTTGCTGCGTTTTTATTACGCGCAGGGGCTGCGCTTGATGAGCACCGTGCACTTTCTCAACAACGAGTTCGCCGACTC
GGCCACCGACCCCAAGGGCGCGCAGTGGAACGGCCTGAGCCCGGCCGGCAAACAGCTGGTGCAACAGGCGCAGGCGTTGG
GCATCGTGATCGATCAATCGCACGCCTCCGATGCGGTGTTCGACCAGTTGATTGCGCTGTCGCCGGTGCCGATCGTGCTT
TCGCACAGCGGTGCGCGTGCGGTCTACAACCACCCGCGCAACATCGACGATGCACGCCTGAAGGTGCTGGCCGCGCATGG
TGGAGTGATCCAGGTCAATTCCTACGGCGGCTACCTGGTGGACAGCGGCGCCAGCCCCGAGCGCAAGGCCGCCGAGAAGG
CGCTCACCGACCAGTACGGCGGCTGGGAGCACGTCAAGATCGCCGACGGCACCAAGCTCAGCGTCGCGCTGAAGGACCTG
GATGCGCGCTACCCGATCAAGCGCGCCACCGAAGAAGACTTCTTCGCGCATCTTGAGCACATCCTGGCAGTGGTCGGGCC
CGAGCACGTGGGCATCGGCATGGATTGGGACGGCGGCGGCGGGGTGGTGGGTCTGGAAGATGTCTCCGACCTGCCGCGCA
TCACCGCGTGGCTGTTGCGCAAGGGCTACACCGAGCAGCAGATCGCCGGTATCTGGGGCGGCAACCTCTTGCGCGTGATG
GACCAGGCGCAGGCGTACGCGGCGGGGAATGGGGAATCGGGAGTGGGGAATCGGTAG

Upstream 100 bases:

>100_bases
CGTGCGGATCGACCGCAGCGCTGCAGCATCCTAGATGTGGCCGTAGTGCGCGTGCGGCCAGCCGCTATGATCGGCTCACC
CCCACTGCCTGTGAGATCGC

Downstream 100 bases:

>100_bases
AGCGCGGGATTTGGGAATCGGGATTCGCAAAGCCGAGGCGGTCTGTCGTGCGGGGCTGGTTCTGCATGGGCCTGGCGGCG
GGGCGCCGGCTTGGTTGTGG

Product: dipeptidase

Products: NA

Alternate protein names: ORF X [H]

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MHLRSLSLSVALLLAAALPAQALEFSKAELARATALQKRLVTLDSHLDTPANLERADFDVLQAHRGNRLSQVDYPRMVEG
ALDGGFWAVYTGQGDRSAAAHLDDRDAGLQRLLRIHTLVAAQSQRFALATTPADAARIKAAGKRVVYISMENASPLVADP
TLLRFYYAQGLRLMSTVHFLNNEFADSATDPKGAQWNGLSPAGKQLVQQAQALGIVIDQSHASDAVFDQLIALSPVPIVL
SHSGARAVYNHPRNIDDARLKVLAAHGGVIQVNSYGGYLVDSGASPERKAAEKALTDQYGGWEHVKIADGTKLSVALKDL
DARYPIKRATEEDFFAHLEHILAVVGPEHVGIGMDWDGGGGVVGLEDVSDLPRITAWLLRKGYTEQQIAGIWGGNLLRVM
DQAQAYAAGNGESGVGNR

Sequences:

>Translated_418_residues
MHLRSLSLSVALLLAAALPAQALEFSKAELARATALQKRLVTLDSHLDTPANLERADFDVLQAHRGNRLSQVDYPRMVEG
ALDGGFWAVYTGQGDRSAAAHLDDRDAGLQRLLRIHTLVAAQSQRFALATTPADAARIKAAGKRVVYISMENASPLVADP
TLLRFYYAQGLRLMSTVHFLNNEFADSATDPKGAQWNGLSPAGKQLVQQAQALGIVIDQSHASDAVFDQLIALSPVPIVL
SHSGARAVYNHPRNIDDARLKVLAAHGGVIQVNSYGGYLVDSGASPERKAAEKALTDQYGGWEHVKIADGTKLSVALKDL
DARYPIKRATEEDFFAHLEHILAVVGPEHVGIGMDWDGGGGVVGLEDVSDLPRITAWLLRKGYTEQQIAGIWGGNLLRVM
DQAQAYAAGNGESGVGNR
>Mature_418_residues
MHLRSLSLSVALLLAAALPAQALEFSKAELARATALQKRLVTLDSHLDTPANLERADFDVLQAHRGNRLSQVDYPRMVEG
ALDGGFWAVYTGQGDRSAAAHLDDRDAGLQRLLRIHTLVAAQSQRFALATTPADAARIKAAGKRVVYISMENASPLVADP
TLLRFYYAQGLRLMSTVHFLNNEFADSATDPKGAQWNGLSPAGKQLVQQAQALGIVIDQSHASDAVFDQLIALSPVPIVL
SHSGARAVYNHPRNIDDARLKVLAAHGGVIQVNSYGGYLVDSGASPERKAAEKALTDQYGGWEHVKIADGTKLSVALKDL
DARYPIKRATEEDFFAHLEHILAVVGPEHVGIGMDWDGGGGVVGLEDVSDLPRITAWLLRKGYTEQQIAGIWGGNLLRVM
DQAQAYAAGNGESGVGNR

Specific function: Unknown

COG id: COG2355

COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M19 family [H]

Homologues:

Organism=Homo sapiens, GI11641269, Length=388, Percent_Identity=28.3505154639175, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI193211608, Length=381, Percent_Identity=28.0839895013123, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI189458885, Length=373, Percent_Identity=28.1501340482574, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI4758190, Length=373, Percent_Identity=28.1501340482574, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI193211610, Length=381, Percent_Identity=28.0839895013123, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI281362638, Length=393, Percent_Identity=28.2442748091603, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI281362636, Length=393, Percent_Identity=28.2442748091603, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI221475880, Length=416, Percent_Identity=27.1634615384615, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI161083233, Length=337, Percent_Identity=25.8160237388724, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008257 [H]

Pfam domain/function: PF01244 Peptidase_M19 [H]

EC number: NA

Molecular weight: Translated: 44943; Mature: 44943

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00148 ARGINASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLRSLSLSVALLLAAALPAQALEFSKAELARATALQKRLVTLDSHLDTPANLERADFDV
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LQAHRGNRLSQVDYPRMVEGALDGGFWAVYTGQGDRSAAAHLDDRDAGLQRLLRIHTLVA
HHHHCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHH
AQSQRFALATTPADAARIKAAGKRVVYISMENASPLVADPTLLRFYYAQGLRLMSTVHFL
HCCCCEEEEECCCHHHHHHHCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHH
NNEFADSATDPKGAQWNGLSPAGKQLVQQAQALGIVIDQSHASDAVFDQLIALSPVPIVL
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCEEE
SHSGARAVYNHPRNIDDARLKVLAAHGGVIQVNSYGGYLVDSGASPERKAAEKALTDQYG
ECCCCHHHHCCCCCCCHHHEEEEEECCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHCC
GWEHVKIADGTKLSVALKDLDARYPIKRATEEDFFAHLEHILAVVGPEHVGIGMDWDGGG
CEEEEEEECCCEEEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
GVVGLEDVSDLPRITAWLLRKGYTEQQIAGIWGGNLLRVMDQAQAYAAGNGESGVGNR
CEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHLRSLSLSVALLLAAALPAQALEFSKAELARATALQKRLVTLDSHLDTPANLERADFDV
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LQAHRGNRLSQVDYPRMVEGALDGGFWAVYTGQGDRSAAAHLDDRDAGLQRLLRIHTLVA
HHHHCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHH
AQSQRFALATTPADAARIKAAGKRVVYISMENASPLVADPTLLRFYYAQGLRLMSTVHFL
HCCCCEEEEECCCHHHHHHHCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHH
NNEFADSATDPKGAQWNGLSPAGKQLVQQAQALGIVIDQSHASDAVFDQLIALSPVPIVL
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCEEE
SHSGARAVYNHPRNIDDARLKVLAAHGGVIQVNSYGGYLVDSGASPERKAAEKALTDQYG
ECCCCHHHHCCCCCCCHHHEEEEEECCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHCC
GWEHVKIADGTKLSVALKDLDARYPIKRATEEDFFAHLEHILAVVGPEHVGIGMDWDGGG
CEEEEEEECCCEEEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
GVVGLEDVSDLPRITAWLLRKGYTEQQIAGIWGGNLLRVMDQAQAYAAGNGESGVGNR
CEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1313537 [H]