| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21245067
Identifier: 21245067
GI number: 21245067
Start: 5148039
End: 5150513
Strand: Reverse
Name: 21245067
Synonym: XAC4355
Alternate gene names: NA
Gene position: 5150513-5148039 (Counterclockwise)
Preceding gene: 21245068
Following gene: 21245061
Centisome position: 99.52
GC content: 66.59
Gene sequence:
>2475_bases ATGCTGTCAGTCGTATCGCCCAACCGTTCTACCGCGCGTGCTGCGCGCACGCCGTTCTGGCGCCGCGCTGCGGTCGGTCT GTGCCTGCTTGGCGTGGCCATGTCCGGCCCGCTGGCCGCGCAAGACCCGGCGCAGGTCAACACCTTCATCGGCAGCAAGG ACGACGGCAATACCTATCCGGGCGCCTCGGCGCCATTCGGCCTGATCCAGGTCAGCCCGATCGGCGCGCACTACGCTGGC TGGCGCTACGACGACCCCAGCATCCGGGGCTTCGGCCACTCGTTCCTGTCCGGCGCCGGCTGCTGGGAGCAGGGCGGCCA GGTGTCGGTGCTGCCGGTCACCGGCCGTATCGGTCCCGGGGGCGACTTCGACACCAACGACGCCAAGGCCTTCGACCAGA AACGCTACGCCGCGCGTTACACGCATGACGGCGAAGTGGGCCAGGCAGGCTATTACAAGGTGCGGCTCACCGATTACGGT GGCATCGACGCCGAAGCCAGCGCGCTGACCCGTGCCGCGACCGAGCGCTACACCTTCGCGCCGGGTGCCGACACCGGCCA TGTGCTGGTCAACGTGGCGCAGGCCAACGACCGCCATGTGGTGATCGGCAGCCAGCTACAGATCGTCGGCGACCGTGTGG TCGAGGGCAAACTGACCACGCAGAGTTTCTGCGGCGGCCACGAATACACCACCTGGTTCCGGCTGGAATTCGATCGCCCG TTCACCGCGCATGGCGTCTGGGGCGAAGAGGGCGGCGTGCCCGGCGCGCGTCACGGCATGGGCGGCGAACTCAAACCCAA CGGCGCCTGGCTCAGCTTCCCGCTAGGCAAAGACAAGAACGCGCGTGCGGTGACCGTGGTCAGCGCCATCTCGCATGTGG ATGCGCAAGGCGCCCGCAGCAACCTGCGTGCCGATGGCATGCAGGGCGGCAAACTGCTCAGTCTTGAACAGATGCGCCAG CGCGCGCAGAACGGCTGGCGCAATGCGTTGGCCAGCATGCAAGTGGAAGGCGCCAGCAACGACGACCGTTCCGTGGCCTA TACCGCGCTGTACCACGCCTTGCTGCAGCCGCTGACCGGCAGCGATGCCGATGGCCGCTATCGCGGCTACGACGACGCGA TCCATCGCGCCGATGGCTGGACCTACTACGAGTATTTTTCGCTGTGGGATACCTACCGCTCGCAAAACCAGCTGCTCGCC CTGCTGCAGCCGACACGCGCGCGCGACATCGGCCGCTCGTTGCTGGCGATCCAGCAGCAAGGCGGCTGGCTGCCGCGTTG GGGCTACGCCAACTTCGACACCAACATCATGACCGGCGACCCGGTCACCCCGTTCCTGGTGGATCTGTGGCGCTTCGGCG CGTTGCAGGGCAACGAGGCGGAGGCGTATGCAGCGTTGCGCCAGAACGCCTTCGGCCAGCCGCCGATCAATTCGCGCCAC GCTGGGCGCTCGGGCAATGCCAACTATCTGGCCAACGGTTTCGTGCAGTACGACCGCGCTTTCCCCTCCAAGGGCATGGA TGTGGACCCGCACCACGGCGGCTCGGCCACGCTGGAATATGCATTGGCCGATTGCGCGCTCGCGCAGATGGCACAAGCAC TGGGCCACGGCGAAGACGCCGCGCAGCTGCGCAAACGCGGCGGCAACTGGCACCGCGTCTGGGACGCGGATGTGCGCGAT GCCGAGACCGGCTTTGCAGGATTCCCGCGCCCGCGGCTGGAAGACGGCAGCTGGTACGCACCGTCCGACGATCACTACAG CCCACGTTCCGAGCACGGTTTCCACGAAGGCACCGCCTGGCAGTATCAGTGGCTGGTGCAGCAGGACATCCCCGGCATGC TGCAGGCCATGCATGGCAGCCAACAAGCCGGCAAACGCCTGGACGCCTTCTTCGCCTACGACGATCTGCTGAAAGATCCG CTCACTGCCGCACGCACGCACTGGGTGGTCGGCCCGTACAGCTACTACAACCAGTACCGCTACAACCCCAACAACGAACC GGACCTGCACGCACCCTGGATGTACACGCTGATCGGGCAACCGTGGAAGACCGCCACCGTGGTGCGCGCCGCGCAACAGT TGTTTACCAATGCGCCCAACGGCGTCACCGGCAACGACGACCTTGGCACCATGTCGGCCTGGTATCTGTTCAGTGCCCTG GGGTTGTATCCGGCGGTGCCGGGCAGCGGGCAATTCCTGCTGCATGCGCCGCGTTTCAAGCGGGTCACGCTGAATCTGGG CAACGGCAAGCGCCTGCGCATCGACGCCCCCGGCGCCGACGGCCGCGCGCTGCAATACGTGGACAACGTGCGTTGGAATG GCAAGGCCCAGCCGCAGGTATTCCTGGACTGGGCGCAGCTGCAGCAGGGCGGCACGCTGGCGTTCGCGCTCACCAAGCAG GCACCTACGCAAGGCTGGGGTACGCAAGCGGATGCATTGCCGGCATCGTTCTGTGCGACCCCGCAGGCGCAGTAA
Upstream 100 bases:
>100_bases CCGCGCGCGTCTGTTCGTGCGTCGTTCGCTGCGTGTTGCAGCGGCACGCACGCGCCTTCCATCTGCGGCTTCGGCCGCCC TTTCCCCCAAGGTGTTCTGC
Downstream 100 bases:
>100_bases CACCACGGCGGTTGAAACCCCTCTCCCTGCCGGGCGAAAAGCGGCAACAGCGTTTAACGCTAAAAGAGCGCAGCGTTAAA GCCCCTCCCCCGCCGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Glycoside Hydrolase Family Protein; Sugar Hydrolase; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Lipoprotein
Number of amino acids: Translated: 824; Mature: 824
Protein sequence:
>824_residues MLSVVSPNRSTARAARTPFWRRAAVGLCLLGVAMSGPLAAQDPAQVNTFIGSKDDGNTYPGASAPFGLIQVSPIGAHYAG WRYDDPSIRGFGHSFLSGAGCWEQGGQVSVLPVTGRIGPGGDFDTNDAKAFDQKRYAARYTHDGEVGQAGYYKVRLTDYG GIDAEASALTRAATERYTFAPGADTGHVLVNVAQANDRHVVIGSQLQIVGDRVVEGKLTTQSFCGGHEYTTWFRLEFDRP FTAHGVWGEEGGVPGARHGMGGELKPNGAWLSFPLGKDKNARAVTVVSAISHVDAQGARSNLRADGMQGGKLLSLEQMRQ RAQNGWRNALASMQVEGASNDDRSVAYTALYHALLQPLTGSDADGRYRGYDDAIHRADGWTYYEYFSLWDTYRSQNQLLA LLQPTRARDIGRSLLAIQQQGGWLPRWGYANFDTNIMTGDPVTPFLVDLWRFGALQGNEAEAYAALRQNAFGQPPINSRH AGRSGNANYLANGFVQYDRAFPSKGMDVDPHHGGSATLEYALADCALAQMAQALGHGEDAAQLRKRGGNWHRVWDADVRD AETGFAGFPRPRLEDGSWYAPSDDHYSPRSEHGFHEGTAWQYQWLVQQDIPGMLQAMHGSQQAGKRLDAFFAYDDLLKDP LTAARTHWVVGPYSYYNQYRYNPNNEPDLHAPWMYTLIGQPWKTATVVRAAQQLFTNAPNGVTGNDDLGTMSAWYLFSAL GLYPAVPGSGQFLLHAPRFKRVTLNLGNGKRLRIDAPGADGRALQYVDNVRWNGKAQPQVFLDWAQLQQGGTLAFALTKQ APTQGWGTQADALPASFCATPQAQ
Sequences:
>Translated_824_residues MLSVVSPNRSTARAARTPFWRRAAVGLCLLGVAMSGPLAAQDPAQVNTFIGSKDDGNTYPGASAPFGLIQVSPIGAHYAG WRYDDPSIRGFGHSFLSGAGCWEQGGQVSVLPVTGRIGPGGDFDTNDAKAFDQKRYAARYTHDGEVGQAGYYKVRLTDYG GIDAEASALTRAATERYTFAPGADTGHVLVNVAQANDRHVVIGSQLQIVGDRVVEGKLTTQSFCGGHEYTTWFRLEFDRP FTAHGVWGEEGGVPGARHGMGGELKPNGAWLSFPLGKDKNARAVTVVSAISHVDAQGARSNLRADGMQGGKLLSLEQMRQ RAQNGWRNALASMQVEGASNDDRSVAYTALYHALLQPLTGSDADGRYRGYDDAIHRADGWTYYEYFSLWDTYRSQNQLLA LLQPTRARDIGRSLLAIQQQGGWLPRWGYANFDTNIMTGDPVTPFLVDLWRFGALQGNEAEAYAALRQNAFGQPPINSRH AGRSGNANYLANGFVQYDRAFPSKGMDVDPHHGGSATLEYALADCALAQMAQALGHGEDAAQLRKRGGNWHRVWDADVRD AETGFAGFPRPRLEDGSWYAPSDDHYSPRSEHGFHEGTAWQYQWLVQQDIPGMLQAMHGSQQAGKRLDAFFAYDDLLKDP LTAARTHWVVGPYSYYNQYRYNPNNEPDLHAPWMYTLIGQPWKTATVVRAAQQLFTNAPNGVTGNDDLGTMSAWYLFSAL GLYPAVPGSGQFLLHAPRFKRVTLNLGNGKRLRIDAPGADGRALQYVDNVRWNGKAQPQVFLDWAQLQQGGTLAFALTKQ APTQGWGTQADALPASFCATPQAQ >Mature_824_residues MLSVVSPNRSTARAARTPFWRRAAVGLCLLGVAMSGPLAAQDPAQVNTFIGSKDDGNTYPGASAPFGLIQVSPIGAHYAG WRYDDPSIRGFGHSFLSGAGCWEQGGQVSVLPVTGRIGPGGDFDTNDAKAFDQKRYAARYTHDGEVGQAGYYKVRLTDYG GIDAEASALTRAATERYTFAPGADTGHVLVNVAQANDRHVVIGSQLQIVGDRVVEGKLTTQSFCGGHEYTTWFRLEFDRP FTAHGVWGEEGGVPGARHGMGGELKPNGAWLSFPLGKDKNARAVTVVSAISHVDAQGARSNLRADGMQGGKLLSLEQMRQ RAQNGWRNALASMQVEGASNDDRSVAYTALYHALLQPLTGSDADGRYRGYDDAIHRADGWTYYEYFSLWDTYRSQNQLLA LLQPTRARDIGRSLLAIQQQGGWLPRWGYANFDTNIMTGDPVTPFLVDLWRFGALQGNEAEAYAALRQNAFGQPPINSRH AGRSGNANYLANGFVQYDRAFPSKGMDVDPHHGGSATLEYALADCALAQMAQALGHGEDAAQLRKRGGNWHRVWDADVRD AETGFAGFPRPRLEDGSWYAPSDDHYSPRSEHGFHEGTAWQYQWLVQQDIPGMLQAMHGSQQAGKRLDAFFAYDDLLKDP LTAARTHWVVGPYSYYNQYRYNPNNEPDLHAPWMYTLIGQPWKTATVVRAAQQLFTNAPNGVTGNDDLGTMSAWYLFSAL GLYPAVPGSGQFLLHAPRFKRVTLNLGNGKRLRIDAPGADGRALQYVDNVRWNGKAQPQVFLDWAQLQQGGTLAFALTKQ APTQGWGTQADALPASFCATPQAQ
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90081; Mature: 90081
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSVVSPNRSTARAARTPFWRRAAVGLCLLGVAMSGPLAAQDPAQVNTFIGSKDDGNTYP CCEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCC GASAPFGLIQVSPIGAHYAGWRYDDPSIRGFGHSFLSGAGCWEQGGQVSVLPVTGRIGPG CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCEEEEEEECCCCCCC GDFDTNDAKAFDQKRYAARYTHDGEVGQAGYYKVRLTDYGGIDAEASALTRAATERYTFA CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCEEEC PGADTGHVLVNVAQANDRHVVIGSQLQIVGDRVVEGKLTTQSFCGGHEYTTWFRLEFDRP CCCCCCEEEEEEEECCCCEEEECCCEEEECCEEECCCCCHHHHCCCCCCEEEEEEEECCC FTAHGVWGEEGGVPGARHGMGGELKPNGAWLSFPLGKDKNARAVTVVSAISHVDAQGARS EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHCCCCCCC NLRADGMQGGKLLSLEQMRQRAQNGWRNALASMQVEGASNDDRSVAYTALYHALLQPLTG CCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCC SDADGRYRGYDDAIHRADGWTYYEYFSLWDTYRSQNQLLALLQPTRARDIGRSLLAIQQQ CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHC GGWLPRWGYANFDTNIMTGDPVTPFLVDLWRFGALQGNEAEAYAALRQNAFGQPPINSRH CCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC AGRSGNANYLANGFVQYDRAFPSKGMDVDPHHGGSATLEYALADCALAQMAQALGHGEDA CCCCCCCCHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH AQLRKRGGNWHRVWDADVRDAETGFAGFPRPRLEDGSWYAPSDDHYSPRSEHGFHEGTAW HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCE QYQWLVQQDIPGMLQAMHGSQQAGKRLDAFFAYDDLLKDPLTAARTHWVVGPYSYYNQYR EEEEEEHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHCEEEECCHHHHHCCC YNPNNEPDLHAPWMYTLIGQPWKTATVVRAAQQLFTNAPNGVTGNDDLGTMSAWYLFSAL CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH GLYPAVPGSGQFLLHAPRFKRVTLNLGNGKRLRIDAPGADGRALQYVDNVRWNGKAQPQV HHCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEECCCCCCCEEHHHHCCCCCCCCCCEE FLDWAQLQQGGTLAFALTKQAPTQGWGTQADALPASFCATPQAQ EEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MLSVVSPNRSTARAARTPFWRRAAVGLCLLGVAMSGPLAAQDPAQVNTFIGSKDDGNTYP CCEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCC GASAPFGLIQVSPIGAHYAGWRYDDPSIRGFGHSFLSGAGCWEQGGQVSVLPVTGRIGPG CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCEEEEEEECCCCCCC GDFDTNDAKAFDQKRYAARYTHDGEVGQAGYYKVRLTDYGGIDAEASALTRAATERYTFA CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCEEEC PGADTGHVLVNVAQANDRHVVIGSQLQIVGDRVVEGKLTTQSFCGGHEYTTWFRLEFDRP CCCCCCEEEEEEEECCCCEEEECCCEEEECCEEECCCCCHHHHCCCCCCEEEEEEEECCC FTAHGVWGEEGGVPGARHGMGGELKPNGAWLSFPLGKDKNARAVTVVSAISHVDAQGARS EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHCCCCCCC NLRADGMQGGKLLSLEQMRQRAQNGWRNALASMQVEGASNDDRSVAYTALYHALLQPLTG CCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCC SDADGRYRGYDDAIHRADGWTYYEYFSLWDTYRSQNQLLALLQPTRARDIGRSLLAIQQQ CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHC GGWLPRWGYANFDTNIMTGDPVTPFLVDLWRFGALQGNEAEAYAALRQNAFGQPPINSRH CCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC AGRSGNANYLANGFVQYDRAFPSKGMDVDPHHGGSATLEYALADCALAQMAQALGHGEDA CCCCCCCCHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH AQLRKRGGNWHRVWDADVRDAETGFAGFPRPRLEDGSWYAPSDDHYSPRSEHGFHEGTAW HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCE QYQWLVQQDIPGMLQAMHGSQQAGKRLDAFFAYDDLLKDPLTAARTHWVVGPYSYYNQYR EEEEEEHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHCEEEECCHHHHHCCC YNPNNEPDLHAPWMYTLIGQPWKTATVVRAAQQLFTNAPNGVTGNDDLGTMSAWYLFSAL CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH GLYPAVPGSGQFLLHAPRFKRVTLNLGNGKRLRIDAPGADGRALQYVDNVRWNGKAQPQV HHCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEECCCCCCCEEHHHHCCCCCCCCCCEE FLDWAQLQQGGTLAFALTKQAPTQGWGTQADALPASFCATPQAQ EEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA