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The map label for this gene is ychJ [C]

Identifier: 21245009

GI number: 21245009

Start: 5079930

End: 5080316

Strand: Reverse

Name: ychJ [C]

Synonym: XAC4297

Alternate gene names: 21245009

Gene position: 5080316-5079930 (Counterclockwise)

Preceding gene: 21245011

Following gene: 77748773

Centisome position: 98.16

GC content: 69.77

Gene sequence:

>387_bases
ATGCCGACCACACCCACCGACCCCTGTCCCTGCGGCCGCCCGGCCGATTACGCACGTTGTTGCGGCCCATATCACGCCGG
TGCCGCCGCGCCCGACGCCGAGACGTTGATGCGCGCGCGCTACAGCGCCTACGTGCGCCGCGATGCTGCGTACCTGCTGG
CCAGCTGGCATCCGTCCACGCGCCCGGCCGCGCTGTCGCTGGACGAAGGCGGGCGCACCACCTGGCTTGGCCTGACCGTG
CAGCGCACCCTCGATACCGGCCCCGAAACAGCCGAGGTGGTCTTCCTGGCACGCTATCGCATCGGTGGCGGCAGCGCAGT
CCGCATGACCGAACACAGCCGTTTCGTGCGCGAGGCAGGTCACTGGTTCTACCTCGACGCACGTTGA

Upstream 100 bases:

>100_bases
ACGGGGGCGACAGCATAGCCGCCGCTCCCGCTTCCCGCTTCGCAACGCAATCCCCAATCCCCAATCCCCAATCCCCAATC
CCATCCCGCACAATCCCCGC

Downstream 100 bases:

>100_bases
TCCTCCACGTCGACCGTTGCCCCCCACCCAACCAGACGTCGCCAGCCGCCGCGCGCCCCTCGATGCGCGGCCCACCAGGC
CTGTTTCGCCCGACGAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MPTTPTDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAYVRRDAAYLLASWHPSTRPAALSLDEGGRTTWLGLTV
QRTLDTGPETAEVVFLARYRIGGGSAVRMTEHSRFVREAGHWFYLDAR

Sequences:

>Translated_128_residues
MPTTPTDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAYVRRDAAYLLASWHPSTRPAALSLDEGGRTTWLGLTV
QRTLDTGPETAEVVFLARYRIGGGSAVRMTEHSRFVREAGHWFYLDAR
>Mature_127_residues
PTTPTDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAYVRRDAAYLLASWHPSTRPAALSLDEGGRTTWLGLTVQ
RTLDTGPETAEVVFLARYRIGGGSAVRMTEHSRFVREAGHWFYLDAR

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=124, Percent_Identity=45.1612903225806, Blast_Score=100, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 14091; Mature: 13960

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTPTDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAYVRRDAAYLLASWHPST
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCC
RPAALSLDEGGRTTWLGLTVQRTLDTGPETAEVVFLARYRIGGGSAVRMTEHSRFVREAG
CCEEEEECCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCEEEEHHHHHHHHHCC
HWFYLDAR
CEEEEECC
>Mature Secondary Structure 
PTTPTDPCPCGRPADYARCCGPYHAGAAAPDAETLMRARYSAYVRRDAAYLLASWHPST
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCC
RPAALSLDEGGRTTWLGLTVQRTLDTGPETAEVVFLARYRIGGGSAVRMTEHSRFVREAG
CCEEEEECCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCEEEEHHHHHHHHHCC
HWFYLDAR
CEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA