Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21245002

Identifier: 21245002

GI number: 21245002

Start: 5062975

End: 5064297

Strand: Reverse

Name: 21245002

Synonym: XAC4285

Alternate gene names: NA

Gene position: 5064297-5062975 (Counterclockwise)

Preceding gene: 21245003

Following gene: 21245001

Centisome position: 97.85

GC content: 64.32

Gene sequence:

>1323_bases
ATGCGCCGACCCAACCGGGGCTCCCTCCTGCTTGAGACCGTTGAGACGTCGCCAAACGCTCTACGTGGCCCAGGTCTCCA
GGCAGACATCGCGCGAACGGGCACCTGGCCTGCAGCAACGTGCCAGCAAGCAGACGCGAGCAGGGGTGTTCTGGCGTCCA
CGCAGGGGGCGGGCCACAATCGTGAAGTCCTTACGTGGAAGCGCTGTATGTCCAGCTCGCGACAGCTAGTCGTTCCCCTG
GTGCTTACCAGTGCATTTGCGTTGCTATCGATGACGTCGACTGGCGCGGTGACGCCCTCTTCGGACGATGCAGCTGCCGT
CGAGCGGCTGCAGTTGAAGACCAACGCCATAGAACTGAGCGTCACGCCGGCATTTGGCGGGCGCGTGCTGTCGTTCAATC
TGCGCGGCCAGCCCAACGTGTTGAAGCTCGGTGCAGCGGTGGAGCAACAGCCTGCGCCCGAGGTCTCGGCCACTGCCGGG
GATATTGCTTATTTTGGCCATGATGTGTGGGTCGGGCCGCAGAGTCAGTGGTGGCTGCACCAGCAACTCAATCGCGAGCG
TCAGGCGGCGGCTGCGGTGTGGCCGCCGGATCCGTATCTGTCGCTGGCGCAGACGCGCGTCAGCGTGCGTCGGCATGACG
TGGTGGAATTTGAAGGGGTGCCCAGCCCGCTAACCGGGGTGCAATTGCGCAAGCAGATCAAACGTTCTGCAGCGCGTGCG
GACACTGTCGAAATCGGTGCCAGCGCACGCAATATCCGCGCGCAGCCGATTGCCTGGGATCTTTGGTTCAATACGCGGCT
TGCGGCCACGACGCGGGTGTTCGTGCCGGTTGCCGCTGCTACGGATATTCGGCTGCAGCCGCCGCGCGAGCCCGGCACGA
TTGCGCCGCGTTATCAGCAGGAGCGCGGCCTGCTTGCGCTGCGCGCCGATGCCCGCCCAGACGGATCGATCCAGCGCGGC
AAGTTATTGCTGCAGCCGTCTGCAGGATGGATGGCCGGTTTCGCGGGCGGGCAGGTCTTGGTGATTCGCTTCGCACATCA
ACCGATGTCGGCGATCCATCCCGAGCAAGGCCAGGTGGAGTTGTATCTGGATGTGCCACCCCAGCATCCGGAACAGGGAT
TGCTGGAAATGGAGGTGCACGCACCGTATCGGCAGCTTGCGCCAGGTGCGCAAATGCAGGCACAGGAGCAGTGGACGCTG
CTGCGTTACACCGGGCCGGATGAGGAGCAGGCGCAGCGGCAGTTCCTTTGCAGCAACGCCAAAGCGCTCGCGCTGGTGAA
TGCATGCGGTGCGCCCTCTCCGTCTCCGTCTCCGCCTCGCTGA

Upstream 100 bases:

>100_bases
GGAAAGCGGCTACCTGGCTCGATGAGTCGTCGCGTTCGCTGCGCTCGTTCCGGATGCCGGCATCGGATGCGGGTTCCAAC
CTGCTTGCATGTCCGAGCGC

Downstream 100 bases:

>100_bases
GGTGCGCATTCACCTCAAAGCCGGGCTGTGGCTATGATGTCGCCCATTCCCTGACCAGATCGATGCGCATGCAACGACGC
CACTTCCTGAAGAATGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MRRPNRGSLLLETVETSPNALRGPGLQADIARTGTWPAATCQQADASRGVLASTQGAGHNREVLTWKRCMSSSRQLVVPL
VLTSAFALLSMTSTGAVTPSSDDAAAVERLQLKTNAIELSVTPAFGGRVLSFNLRGQPNVLKLGAAVEQQPAPEVSATAG
DIAYFGHDVWVGPQSQWWLHQQLNRERQAAAAVWPPDPYLSLAQTRVSVRRHDVVEFEGVPSPLTGVQLRKQIKRSAARA
DTVEIGASARNIRAQPIAWDLWFNTRLAATTRVFVPVAAATDIRLQPPREPGTIAPRYQQERGLLALRADARPDGSIQRG
KLLLQPSAGWMAGFAGGQVLVIRFAHQPMSAIHPEQGQVELYLDVPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTL
LRYTGPDEEQAQRQFLCSNAKALALVNACGAPSPSPSPPR

Sequences:

>Translated_440_residues
MRRPNRGSLLLETVETSPNALRGPGLQADIARTGTWPAATCQQADASRGVLASTQGAGHNREVLTWKRCMSSSRQLVVPL
VLTSAFALLSMTSTGAVTPSSDDAAAVERLQLKTNAIELSVTPAFGGRVLSFNLRGQPNVLKLGAAVEQQPAPEVSATAG
DIAYFGHDVWVGPQSQWWLHQQLNRERQAAAAVWPPDPYLSLAQTRVSVRRHDVVEFEGVPSPLTGVQLRKQIKRSAARA
DTVEIGASARNIRAQPIAWDLWFNTRLAATTRVFVPVAAATDIRLQPPREPGTIAPRYQQERGLLALRADARPDGSIQRG
KLLLQPSAGWMAGFAGGQVLVIRFAHQPMSAIHPEQGQVELYLDVPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTL
LRYTGPDEEQAQRQFLCSNAKALALVNACGAPSPSPSPPR
>Mature_440_residues
MRRPNRGSLLLETVETSPNALRGPGLQADIARTGTWPAATCQQADASRGVLASTQGAGHNREVLTWKRCMSSSRQLVVPL
VLTSAFALLSMTSTGAVTPSSDDAAAVERLQLKTNAIELSVTPAFGGRVLSFNLRGQPNVLKLGAAVEQQPAPEVSATAG
DIAYFGHDVWVGPQSQWWLHQQLNRERQAAAAVWPPDPYLSLAQTRVSVRRHDVVEFEGVPSPLTGVQLRKQIKRSAARA
DTVEIGASARNIRAQPIAWDLWFNTRLAATTRVFVPVAAATDIRLQPPREPGTIAPRYQQERGLLALRADARPDGSIQRG
KLLLQPSAGWMAGFAGGQVLVIRFAHQPMSAIHPEQGQVELYLDVPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTL
LRYTGPDEEQAQRQFLCSNAKALALVNACGAPSPSPSPPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47756; Mature: 47756

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPNRGSLLLETVETSPNALRGPGLQADIARTGTWPAATCQQADASRGVLASTQGAGHN
CCCCCCCCEEEEEECCCCCCCCCCCCCEEHHCCCCCCCHHHHHCCCCCCEEEECCCCCCC
REVLTWKRCMSSSRQLVVPLVLTSAFALLSMTSTGAVTPSSDDAAAVERLQLKTNAIELS
CCHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEECEEEEE
VTPAFGGRVLSFNLRGQPNVLKLGAAVEQQPAPEVSATAGDIAYFGHDVWVGPQSQWWLH
EECCCCCEEEEEECCCCCCEEEECCHHCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHH
QQLNRERQAAAAVWPPDPYLSLAQTRVSVRRHDVVEFEGVPSPLTGVQLRKQIKRSAARA
HHHCHHHHHEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCC
DTVEIGASARNIRAQPIAWDLWFNTRLAATTRVFVPVAAATDIRLQPPREPGTIAPRYQQ
CEEEECCCCCCCCCCCEEEEEEECCEEEEEEEEEEEEEEECCEEECCCCCCCCCCCCHHH
ERGLLALRADARPDGSIQRGKLLLQPSAGWMAGFAGGQVLVIRFAHQPMSAIHPEQGQVE
CCCEEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCEEEEEEECCCCHHHCCCCCCCEE
LYLDVPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTLLRYTGPDEEQAQRQFLCSNA
EEEECCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCC
KALALVNACGAPSPSPSPPR
CEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRRPNRGSLLLETVETSPNALRGPGLQADIARTGTWPAATCQQADASRGVLASTQGAGHN
CCCCCCCCEEEEEECCCCCCCCCCCCCEEHHCCCCCCCHHHHHCCCCCCEEEECCCCCCC
REVLTWKRCMSSSRQLVVPLVLTSAFALLSMTSTGAVTPSSDDAAAVERLQLKTNAIELS
CCHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEECEEEEE
VTPAFGGRVLSFNLRGQPNVLKLGAAVEQQPAPEVSATAGDIAYFGHDVWVGPQSQWWLH
EECCCCCEEEEEECCCCCCEEEECCHHCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHH
QQLNRERQAAAAVWPPDPYLSLAQTRVSVRRHDVVEFEGVPSPLTGVQLRKQIKRSAARA
HHHCHHHHHEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCC
DTVEIGASARNIRAQPIAWDLWFNTRLAATTRVFVPVAAATDIRLQPPREPGTIAPRYQQ
CEEEECCCCCCCCCCCEEEEEEECCEEEEEEEEEEEEEEECCEEECCCCCCCCCCCCHHH
ERGLLALRADARPDGSIQRGKLLLQPSAGWMAGFAGGQVLVIRFAHQPMSAIHPEQGQVE
CCCEEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCEEEEEEECCCCHHHCCCCCCCEE
LYLDVPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTLLRYTGPDEEQAQRQFLCSNA
EEEECCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCC
KALALVNACGAPSPSPSPPR
CEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA