| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21245002
Identifier: 21245002
GI number: 21245002
Start: 5062975
End: 5064297
Strand: Reverse
Name: 21245002
Synonym: XAC4285
Alternate gene names: NA
Gene position: 5064297-5062975 (Counterclockwise)
Preceding gene: 21245003
Following gene: 21245001
Centisome position: 97.85
GC content: 64.32
Gene sequence:
>1323_bases ATGCGCCGACCCAACCGGGGCTCCCTCCTGCTTGAGACCGTTGAGACGTCGCCAAACGCTCTACGTGGCCCAGGTCTCCA GGCAGACATCGCGCGAACGGGCACCTGGCCTGCAGCAACGTGCCAGCAAGCAGACGCGAGCAGGGGTGTTCTGGCGTCCA CGCAGGGGGCGGGCCACAATCGTGAAGTCCTTACGTGGAAGCGCTGTATGTCCAGCTCGCGACAGCTAGTCGTTCCCCTG GTGCTTACCAGTGCATTTGCGTTGCTATCGATGACGTCGACTGGCGCGGTGACGCCCTCTTCGGACGATGCAGCTGCCGT CGAGCGGCTGCAGTTGAAGACCAACGCCATAGAACTGAGCGTCACGCCGGCATTTGGCGGGCGCGTGCTGTCGTTCAATC TGCGCGGCCAGCCCAACGTGTTGAAGCTCGGTGCAGCGGTGGAGCAACAGCCTGCGCCCGAGGTCTCGGCCACTGCCGGG GATATTGCTTATTTTGGCCATGATGTGTGGGTCGGGCCGCAGAGTCAGTGGTGGCTGCACCAGCAACTCAATCGCGAGCG TCAGGCGGCGGCTGCGGTGTGGCCGCCGGATCCGTATCTGTCGCTGGCGCAGACGCGCGTCAGCGTGCGTCGGCATGACG TGGTGGAATTTGAAGGGGTGCCCAGCCCGCTAACCGGGGTGCAATTGCGCAAGCAGATCAAACGTTCTGCAGCGCGTGCG GACACTGTCGAAATCGGTGCCAGCGCACGCAATATCCGCGCGCAGCCGATTGCCTGGGATCTTTGGTTCAATACGCGGCT TGCGGCCACGACGCGGGTGTTCGTGCCGGTTGCCGCTGCTACGGATATTCGGCTGCAGCCGCCGCGCGAGCCCGGCACGA TTGCGCCGCGTTATCAGCAGGAGCGCGGCCTGCTTGCGCTGCGCGCCGATGCCCGCCCAGACGGATCGATCCAGCGCGGC AAGTTATTGCTGCAGCCGTCTGCAGGATGGATGGCCGGTTTCGCGGGCGGGCAGGTCTTGGTGATTCGCTTCGCACATCA ACCGATGTCGGCGATCCATCCCGAGCAAGGCCAGGTGGAGTTGTATCTGGATGTGCCACCCCAGCATCCGGAACAGGGAT TGCTGGAAATGGAGGTGCACGCACCGTATCGGCAGCTTGCGCCAGGTGCGCAAATGCAGGCACAGGAGCAGTGGACGCTG CTGCGTTACACCGGGCCGGATGAGGAGCAGGCGCAGCGGCAGTTCCTTTGCAGCAACGCCAAAGCGCTCGCGCTGGTGAA TGCATGCGGTGCGCCCTCTCCGTCTCCGTCTCCGCCTCGCTGA
Upstream 100 bases:
>100_bases GGAAAGCGGCTACCTGGCTCGATGAGTCGTCGCGTTCGCTGCGCTCGTTCCGGATGCCGGCATCGGATGCGGGTTCCAAC CTGCTTGCATGTCCGAGCGC
Downstream 100 bases:
>100_bases GGTGCGCATTCACCTCAAAGCCGGGCTGTGGCTATGATGTCGCCCATTCCCTGACCAGATCGATGCGCATGCAACGACGC CACTTCCTGAAGAATGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MRRPNRGSLLLETVETSPNALRGPGLQADIARTGTWPAATCQQADASRGVLASTQGAGHNREVLTWKRCMSSSRQLVVPL VLTSAFALLSMTSTGAVTPSSDDAAAVERLQLKTNAIELSVTPAFGGRVLSFNLRGQPNVLKLGAAVEQQPAPEVSATAG DIAYFGHDVWVGPQSQWWLHQQLNRERQAAAAVWPPDPYLSLAQTRVSVRRHDVVEFEGVPSPLTGVQLRKQIKRSAARA DTVEIGASARNIRAQPIAWDLWFNTRLAATTRVFVPVAAATDIRLQPPREPGTIAPRYQQERGLLALRADARPDGSIQRG KLLLQPSAGWMAGFAGGQVLVIRFAHQPMSAIHPEQGQVELYLDVPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTL LRYTGPDEEQAQRQFLCSNAKALALVNACGAPSPSPSPPR
Sequences:
>Translated_440_residues MRRPNRGSLLLETVETSPNALRGPGLQADIARTGTWPAATCQQADASRGVLASTQGAGHNREVLTWKRCMSSSRQLVVPL VLTSAFALLSMTSTGAVTPSSDDAAAVERLQLKTNAIELSVTPAFGGRVLSFNLRGQPNVLKLGAAVEQQPAPEVSATAG DIAYFGHDVWVGPQSQWWLHQQLNRERQAAAAVWPPDPYLSLAQTRVSVRRHDVVEFEGVPSPLTGVQLRKQIKRSAARA DTVEIGASARNIRAQPIAWDLWFNTRLAATTRVFVPVAAATDIRLQPPREPGTIAPRYQQERGLLALRADARPDGSIQRG KLLLQPSAGWMAGFAGGQVLVIRFAHQPMSAIHPEQGQVELYLDVPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTL LRYTGPDEEQAQRQFLCSNAKALALVNACGAPSPSPSPPR >Mature_440_residues MRRPNRGSLLLETVETSPNALRGPGLQADIARTGTWPAATCQQADASRGVLASTQGAGHNREVLTWKRCMSSSRQLVVPL VLTSAFALLSMTSTGAVTPSSDDAAAVERLQLKTNAIELSVTPAFGGRVLSFNLRGQPNVLKLGAAVEQQPAPEVSATAG DIAYFGHDVWVGPQSQWWLHQQLNRERQAAAAVWPPDPYLSLAQTRVSVRRHDVVEFEGVPSPLTGVQLRKQIKRSAARA DTVEIGASARNIRAQPIAWDLWFNTRLAATTRVFVPVAAATDIRLQPPREPGTIAPRYQQERGLLALRADARPDGSIQRG KLLLQPSAGWMAGFAGGQVLVIRFAHQPMSAIHPEQGQVELYLDVPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTL LRYTGPDEEQAQRQFLCSNAKALALVNACGAPSPSPSPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47756; Mature: 47756
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPNRGSLLLETVETSPNALRGPGLQADIARTGTWPAATCQQADASRGVLASTQGAGHN CCCCCCCCEEEEEECCCCCCCCCCCCCEEHHCCCCCCCHHHHHCCCCCCEEEECCCCCCC REVLTWKRCMSSSRQLVVPLVLTSAFALLSMTSTGAVTPSSDDAAAVERLQLKTNAIELS CCHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEECEEEEE VTPAFGGRVLSFNLRGQPNVLKLGAAVEQQPAPEVSATAGDIAYFGHDVWVGPQSQWWLH EECCCCCEEEEEECCCCCCEEEECCHHCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHH QQLNRERQAAAAVWPPDPYLSLAQTRVSVRRHDVVEFEGVPSPLTGVQLRKQIKRSAARA HHHCHHHHHEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCC DTVEIGASARNIRAQPIAWDLWFNTRLAATTRVFVPVAAATDIRLQPPREPGTIAPRYQQ CEEEECCCCCCCCCCCEEEEEEECCEEEEEEEEEEEEEEECCEEECCCCCCCCCCCCHHH ERGLLALRADARPDGSIQRGKLLLQPSAGWMAGFAGGQVLVIRFAHQPMSAIHPEQGQVE CCCEEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCEEEEEEECCCCHHHCCCCCCCEE LYLDVPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTLLRYTGPDEEQAQRQFLCSNA EEEECCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCC KALALVNACGAPSPSPSPPR CEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MRRPNRGSLLLETVETSPNALRGPGLQADIARTGTWPAATCQQADASRGVLASTQGAGHN CCCCCCCCEEEEEECCCCCCCCCCCCCEEHHCCCCCCCHHHHHCCCCCCEEEECCCCCCC REVLTWKRCMSSSRQLVVPLVLTSAFALLSMTSTGAVTPSSDDAAAVERLQLKTNAIELS CCHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEECEEEEE VTPAFGGRVLSFNLRGQPNVLKLGAAVEQQPAPEVSATAGDIAYFGHDVWVGPQSQWWLH EECCCCCEEEEEECCCCCCEEEECCHHCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHH QQLNRERQAAAAVWPPDPYLSLAQTRVSVRRHDVVEFEGVPSPLTGVQLRKQIKRSAARA HHHCHHHHHEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCC DTVEIGASARNIRAQPIAWDLWFNTRLAATTRVFVPVAAATDIRLQPPREPGTIAPRYQQ CEEEECCCCCCCCCCCEEEEEEECCEEEEEEEEEEEEEEECCEEECCCCCCCCCCCCHHH ERGLLALRADARPDGSIQRGKLLLQPSAGWMAGFAGGQVLVIRFAHQPMSAIHPEQGQVE CCCEEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCEEEEEEECCCCHHHCCCCCCCEE LYLDVPPQHPEQGLLEMEVHAPYRQLAPGAQMQAQEQWTLLRYTGPDEEQAQRQFLCSNA EEEECCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCC KALALVNACGAPSPSPSPPR CEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA