Click here to switch to the map view.

The map label for this gene is ykkB [H]

Identifier: 21244997

GI number: 21244997

Start: 5056018

End: 5056572

Strand: Reverse

Name: ykkB [H]

Synonym: XAC4280

Alternate gene names: 21244997

Gene position: 5056572-5056018 (Counterclockwise)

Preceding gene: 21244998

Following gene: 21244996

Centisome position: 97.7

GC content: 64.86

Gene sequence:

>555_bases
ATGATGCCGGAGTGTGCCGTGACCGTTGTGATCCAAACCCCGCGACTACGCTTGCGCACGCTCGACCCCGAGCGCGATGC
CGATGCGATGTTGGAGCTGGTCAACGACCCTGGCTTTATCGCCGGTATCAACGACCGCGGCATCCGCACGCGCGAGCAGG
CGCGCGCGCATCTATGCGAATGGGCGCAGGCACATCACGCGCGGTATGGGTTTGCGCATTGGGCGGTGGAGACGCGCGAG
GACGCCGCGTTCATCGGCACGCTGGGCTTGTTGTGTCGCGAGACCTTGCCGGTGCCGCACCTTGGTTTTGCGCTGTTGCC
TGCATATCGCGGCAAGGGCTATGTCACCGAAGCCGGCCGCGCGGTGCTGGACTATGCCCGCGACGTGCTGGGCTTGTCGC
AGCTGTGCGCGATCGTCTCGCCGGACAATGCCGAATCGATCCGTGCGCTGGAAAAGCTCGGACTGCAGCAGCACGGCCTG
CGTGTATTGAGCCCGGAAACCGCGCCAGTGCTGTATTACGCGATCGATCTTGGGCCTGTGGGCAGGGCGGGTTGA

Upstream 100 bases:

>100_bases
CGATCCAGGCATTGTTCGACTGATGCGCAGTGCGCCGTAGCACGCGCACCTGCCGCTCATCGCTTGCCAGTGACGCGCCG
GCACGGCAGTCTGGTTTTTC

Downstream 100 bases:

>100_bases
GCAGCAGGCTTGACGCACCGATTCAACGGGCAGCGCGACCGGCAGTCTGCGTAAGTAGCTGCAGCGTCGATGCGCAGGGC
GTGCTTGGAACGGGGCGCCT

Product: acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MMPECAVTVVIQTPRLRLRTLDPERDADAMLELVNDPGFIAGINDRGIRTREQARAHLCEWAQAHHARYGFAHWAVETRE
DAAFIGTLGLLCRETLPVPHLGFALLPAYRGKGYVTEAGRAVLDYARDVLGLSQLCAIVSPDNAESIRALEKLGLQQHGL
RVLSPETAPVLYYAIDLGPVGRAG

Sequences:

>Translated_184_residues
MMPECAVTVVIQTPRLRLRTLDPERDADAMLELVNDPGFIAGINDRGIRTREQARAHLCEWAQAHHARYGFAHWAVETRE
DAAFIGTLGLLCRETLPVPHLGFALLPAYRGKGYVTEAGRAVLDYARDVLGLSQLCAIVSPDNAESIRALEKLGLQQHGL
RVLSPETAPVLYYAIDLGPVGRAG
>Mature_184_residues
MMPECAVTVVIQTPRLRLRTLDPERDADAMLELVNDPGFIAGINDRGIRTREQARAHLCEWAQAHHARYGFAHWAVETRE
DAAFIGTLGLLCRETLPVPHLGFALLPAYRGKGYVTEAGRAVLDYARDVLGLSQLCAIVSPDNAESIRALEKLGLQQHGL
RVLSPETAPVLYYAIDLGPVGRAG

Specific function: Unknown

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 20165; Mature: 20165

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPECAVTVVIQTPRLRLRTLDPERDADAMLELVNDPGFIAGINDRGIRTREQARAHLCE
CCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH
WAQAHHARYGFAHWAVETREDAAFIGTLGLLCRETLPVPHLGFALLPAYRGKGYVTEAGR
HHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEECHHHH
AVLDYARDVLGLSQLCAIVSPDNAESIRALEKLGLQQHGLRVLSPETAPVLYYAIDLGPV
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCEEECCCCCCEEEEEEECCCC
GRAG
CCCC
>Mature Secondary Structure
MMPECAVTVVIQTPRLRLRTLDPERDADAMLELVNDPGFIAGINDRGIRTREQARAHLCE
CCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH
WAQAHHARYGFAHWAVETREDAAFIGTLGLLCRETLPVPHLGFALLPAYRGKGYVTEAGR
HHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEECHHHH
AVLDYARDVLGLSQLCAIVSPDNAESIRALEKLGLQQHGLRVLSPETAPVLYYAIDLGPV
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCEEECCCCCCEEEEEEECCCC
GRAG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]