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The map label for this gene is yjcH [H]

Identifier: 21244894

GI number: 21244894

Start: 4911925

End: 4912242

Strand: Reverse

Name: yjcH [H]

Synonym: XAC4177

Alternate gene names: 21244894

Gene position: 4912242-4911925 (Counterclockwise)

Preceding gene: 77748760

Following gene: 161485705

Centisome position: 94.91

GC content: 58.81

Gene sequence:

>318_bases
ATGACCGTCTCGAATGACGCGTTGATCGCCAAGATCGATGCCAATCCGAAGTACCACGCACTCAAGCGTCAGCGCAACAC
GCTGGGCTGGACGCTTACCGTACTGATGTTGCTGGCCTATTACGGCTACATCGGCCTGATTGCCTTCGACAAGGAATTCC
TCGCCAAGCCGATCGGTGCCGGCGTGACCTCGATCGGCATCCCGATCGCGATCGGGGTGATGGTATTCACCATCGTCATC
ACCGCCATCTACGTGCGTCGCGCCAACAGCACCTACGACCAGCTGACCGCGCAGATCCTGGAGGAAGCCCGCAAATGA

Upstream 100 bases:

>100_bases
AGTACAGCTTCTAGCGTTCTGCCACTGGCGGCCTGCTCCACTGCGGTGGAGCGGGCATCGCCGCCTTATGTCTTACCAGC
GCTCTATCAGGAGACAGACC

Downstream 100 bases:

>100_bases
GCAAGATTTCGCGCCTTCTCCTGATTCTGGCCGGCCTGATGCCCGCCGGCATCGCACTGGCAGCCGGCGGCGACCTGGGT
CAGGTCGACAAGCAGCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTVSNDALIAKIDANPKYHALKRQRNTLGWTLTVLMLLAYYGYIGLIAFDKEFLAKPIGAGVTSIGIPIAIGVMVFTIVI
TAIYVRRANSTYDQLTAQILEEARK

Sequences:

>Translated_105_residues
MTVSNDALIAKIDANPKYHALKRQRNTLGWTLTVLMLLAYYGYIGLIAFDKEFLAKPIGAGVTSIGIPIAIGVMVFTIVI
TAIYVRRANSTYDQLTAQILEEARK
>Mature_104_residues
TVSNDALIAKIDANPKYHALKRQRNTLGWTLTVLMLLAYYGYIGLIAFDKEFLAKPIGAGVTSIGIPIAIGVMVFTIVIT
AIYVRRANSTYDQLTAQILEEARK

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=101, Percent_Identity=34.6534653465347, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 11590; Mature: 11459

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSNDALIAKIDANPKYHALKRQRNTLGWTLTVLMLLAYYGYIGLIAFDKEFLAKPIGA
CCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
GVTSIGIPIAIGVMVFTIVITAIYVRRANSTYDQLTAQILEEARK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVSNDALIAKIDANPKYHALKRQRNTLGWTLTVLMLLAYYGYIGLIAFDKEFLAKPIGA
CCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
GVTSIGIPIAIGVMVFTIVITAIYVRRANSTYDQLTAQILEEARK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]