| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244853
Identifier: 21244853
GI number: 21244853
Start: 4859777
End: 4861771
Strand: Reverse
Name: 21244853
Synonym: XAC4136
Alternate gene names: NA
Gene position: 4861771-4859777 (Counterclockwise)
Preceding gene: 21244856
Following gene: 21244852
Centisome position: 93.94
GC content: 65.61
Gene sequence:
>1995_bases GTGGCCGCAACGTATGGATTGAAGGACGTCACCGCGCAGGTGGCGGCATTGGTCAACCGCAATGCCGCCCCGCAGACGCT ATCGGTGGCGGCCAACAATGCGACCTTTACCGACACCTGGCCAAATCATGCCAAGGTGCTGACAGTGGTCTACCGCTACG ACGATGGTGCAACGCGCACCGTGGCGGCGAAGGAGGGGGCCACGCTGAGCGTCGGGGCGACCGAGTTCGCGCAGGCCGAC GCGCAGGCAGGCGATATCGCCGCCACCGGGCCCGTGCTCACGATCTGGGGCGCGAGCTACGGTCCGGTGGATGTGACCGC CAAGGTGCAGGGTCTGGTGCAGCAGAGCGACCAGACGCTCGATATCACTGCCAACAACGCGACCTTTACCGATACCTGGC CGAACAACGTCAAGACCCTGGTGGTGGTGGCCAGCTACACGGGGCAGGTTCCGTTCATCGACATCGTGGTGGAAGGCAGC CCCTATGCCTTGAGGTATCGTCCGCACCTGCAGGTGCTCAGCGCCTTCTGGGGCCTGCAGGATGTGACCGGTATCCTGCA GGCCAATGTCAGGCAGCGCCACGTGAGCCTGCCGGCATCCAATGCGGTGTTCGGCGATGGCTGGCCCGGTAACGCAAAGA CGCTGTGCGTGGTATTCCAATACGCCGACTACGCGCCGCAATCTTCCATCATCCAGGAGGGCGGTACGCTCACCATCGAC TACACCGCGTCCACGCCTGCATACACGCCGCCGGTGGATCCGGCTGCGCTGAACATCATCGCGGCCAGTTACGGGCGCAG CGATGTGACTGCCAAGGTCGCCGGGCTGGTCAGCGGTCAGGCATTGAACATCACGGCCAACAACGCCACCTTCGGCGATA GCTGGCCGAATGTCGCCAAATCCTTCGTCGCCGTTTACAGCTGGGGGTCGGCGGCGATCTCCAGCACCGTGGTGCGCGAA GGGCAACCGGTCGCGCTGACCCGCCCGGAACCGGCGTTTGCGATCGACCAGAACTTCGTGTCGATGGCGGGGCTGTTCGC CACCGGCGACGAGATCAAGCTCAGCGCCGCGGCCGGCGGTTTCTGGCAGGTGGGCGCGAACCAGCAGATCGTCGCCAGCG CCGCGTCCAGCGCTGCAGCGGAGACCTTCACCTTGTCGATTCCAGGTGCGGCCGGCTCGCCGATCGTGCAGCTGCGCTGC AGCGACGGCAGCTACGTGCAATTGGCCGCCGACGGTACCTTGCATGCCGGCGGCAGTGCGCAGAACGCGGCCAATCTGGT GCCGTCGCTGCAGTCCAATGGCGCCTTGAACCTGGGTATCGCCGGCGGTGCGCCGTTCGTGGCGGTGGACGCCAATAACG CGATCGTGGGCAGCGGGAACTACAGCCCGGATTTTTCCACCTGCTTCAGTTTCCTGTTCAACCCCACCCAGGCCGGACTG GACAACCATCTCAAGGCGTTTGTGGGCGGTGACCTGTCCACCGAGGATCTGAATCTGGCGCTGGTCAAGGTGATCTGGGA TCTGACCGGCGGGTGCTTCCTGGCGATTGGTCTGGGGCCGTTGATCGGCAATGCCGACAGGCTCGGCCCTGGCGTCTACC GGTTGCTCGAGGGCTATCCCAGCGTCATGCGCGCGATCAACGGGTTGGTCGCCACGGTCGGCAACAACCGGACCGCGTCG GCCGGCGCGCTGCTGACGGTGTTGGTGGCCGTGTACGAAGCCGGCGTGTTCATGCCGTTGCTGCGGCTGGTGCTGAGTAT GGCCGGGTGGTGGGCGCTGTCGATGGCGCTGGTCACCATCCTGACCAAAGTGCTGGGCGGTGCGGCGAGCGCCGGTGCGA CGGTGGCGGCAGAACTGATCACCAGCTTCGCGATCTGGGCCTACCAGACGACGATGGACGTGCTGGCCTACGTAGCCTCG ACCAGCGCTGGGGCGGCCTTCCTGATTGCACAGGACGACAGGAGCGCCGCGCCGTCGCCGCTGCTGGAGGCCTGA
Upstream 100 bases:
>100_bases TTCTGTCGGGTTCGCTTGCGCAGGCCCGGTACGGTTGGTACCGACCATCACCTCACGGGAAAAAAGCATGAACATTTCGA GCAGCGGCGTTCTCAACATC
Downstream 100 bases:
>100_bases TTCGCATCCAGGCACCCGCCACGTCATTGCGGCGCGGCGGGTGTTGGGCCTGCGCTGATGGGGTGTGGCGATGTTTGCCG AGCAGCGGCAGGGCGAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 664; Mature: 663
Protein sequence:
>664_residues MAATYGLKDVTAQVAALVNRNAAPQTLSVAANNATFTDTWPNHAKVLTVVYRYDDGATRTVAAKEGATLSVGATEFAQAD AQAGDIAATGPVLTIWGASYGPVDVTAKVQGLVQQSDQTLDITANNATFTDTWPNNVKTLVVVASYTGQVPFIDIVVEGS PYALRYRPHLQVLSAFWGLQDVTGILQANVRQRHVSLPASNAVFGDGWPGNAKTLCVVFQYADYAPQSSIIQEGGTLTID YTASTPAYTPPVDPAALNIIAASYGRSDVTAKVAGLVSGQALNITANNATFGDSWPNVAKSFVAVYSWGSAAISSTVVRE GQPVALTRPEPAFAIDQNFVSMAGLFATGDEIKLSAAAGGFWQVGANQQIVASAASSAAAETFTLSIPGAAGSPIVQLRC SDGSYVQLAADGTLHAGGSAQNAANLVPSLQSNGALNLGIAGGAPFVAVDANNAIVGSGNYSPDFSTCFSFLFNPTQAGL DNHLKAFVGGDLSTEDLNLALVKVIWDLTGGCFLAIGLGPLIGNADRLGPGVYRLLEGYPSVMRAINGLVATVGNNRTAS AGALLTVLVAVYEAGVFMPLLRLVLSMAGWWALSMALVTILTKVLGGAASAGATVAAELITSFAIWAYQTTMDVLAYVAS TSAGAAFLIAQDDRSAAPSPLLEA
Sequences:
>Translated_664_residues MAATYGLKDVTAQVAALVNRNAAPQTLSVAANNATFTDTWPNHAKVLTVVYRYDDGATRTVAAKEGATLSVGATEFAQAD AQAGDIAATGPVLTIWGASYGPVDVTAKVQGLVQQSDQTLDITANNATFTDTWPNNVKTLVVVASYTGQVPFIDIVVEGS PYALRYRPHLQVLSAFWGLQDVTGILQANVRQRHVSLPASNAVFGDGWPGNAKTLCVVFQYADYAPQSSIIQEGGTLTID YTASTPAYTPPVDPAALNIIAASYGRSDVTAKVAGLVSGQALNITANNATFGDSWPNVAKSFVAVYSWGSAAISSTVVRE GQPVALTRPEPAFAIDQNFVSMAGLFATGDEIKLSAAAGGFWQVGANQQIVASAASSAAAETFTLSIPGAAGSPIVQLRC SDGSYVQLAADGTLHAGGSAQNAANLVPSLQSNGALNLGIAGGAPFVAVDANNAIVGSGNYSPDFSTCFSFLFNPTQAGL DNHLKAFVGGDLSTEDLNLALVKVIWDLTGGCFLAIGLGPLIGNADRLGPGVYRLLEGYPSVMRAINGLVATVGNNRTAS AGALLTVLVAVYEAGVFMPLLRLVLSMAGWWALSMALVTILTKVLGGAASAGATVAAELITSFAIWAYQTTMDVLAYVAS TSAGAAFLIAQDDRSAAPSPLLEA >Mature_663_residues AATYGLKDVTAQVAALVNRNAAPQTLSVAANNATFTDTWPNHAKVLTVVYRYDDGATRTVAAKEGATLSVGATEFAQADA QAGDIAATGPVLTIWGASYGPVDVTAKVQGLVQQSDQTLDITANNATFTDTWPNNVKTLVVVASYTGQVPFIDIVVEGSP YALRYRPHLQVLSAFWGLQDVTGILQANVRQRHVSLPASNAVFGDGWPGNAKTLCVVFQYADYAPQSSIIQEGGTLTIDY TASTPAYTPPVDPAALNIIAASYGRSDVTAKVAGLVSGQALNITANNATFGDSWPNVAKSFVAVYSWGSAAISSTVVREG QPVALTRPEPAFAIDQNFVSMAGLFATGDEIKLSAAAGGFWQVGANQQIVASAASSAAAETFTLSIPGAAGSPIVQLRCS DGSYVQLAADGTLHAGGSAQNAANLVPSLQSNGALNLGIAGGAPFVAVDANNAIVGSGNYSPDFSTCFSFLFNPTQAGLD NHLKAFVGGDLSTEDLNLALVKVIWDLTGGCFLAIGLGPLIGNADRLGPGVYRLLEGYPSVMRAINGLVATVGNNRTASA GALLTVLVAVYEAGVFMPLLRLVLSMAGWWALSMALVTILTKVLGGAASAGATVAAELITSFAIWAYQTTMDVLAYVAST SAGAAFLIAQDDRSAAPSPLLEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68347; Mature: 68215
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00381 CLP_PROTEASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATYGLKDVTAQVAALVNRNAAPQTLSVAANNATFTDTWPNHAKVLTVVYRYDDGATRT CCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCCCCCCEEEEEEEEECCCCCEE VAAKEGATLSVGATEFAQADAQAGDIAATGPVLTIWGASYGPVDVTAKVQGLVQQSDQTL EEECCCCEEEECCHHHHHCCCCCCCEEECCCEEEEECCCCCCEEEHHHHHHHHHCCCCEE DITANNATFTDTWPNNVKTLVVVASYTGQVPFIDIVVEGSPYALRYRPHLQVLSAFWGLQ EEEECCCEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHHHHHCHH DVTGILQANVRQRHVSLPASNAVFGDGWPGNAKTLCVVFQYADYAPQSSIIQEGGTLTID HHHHHHHHCHHHHEECCCCCCCEECCCCCCCCCEEEEEEEECCCCCCHHHHHCCCEEEEE YTASTPAYTPPVDPAALNIIAASYGRSDVTAKVAGLVSGQALNITANNATFGDSWPNVAK EECCCCCCCCCCCHHHHEEEEECCCCCCHHHHHHHEECCCEEEEEECCCCCCCCCHHHHH SFVAVYSWGSAAISSTVVREGQPVALTRPEPAFAIDQNFVSMAGLFATGDEIKLSAAAGG HHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCEEECCHHHHHHHEEECCCCEEEEEECCC FWQVGANQQIVASAASSAAAETFTLSIPGAAGSPIVQLRCSDGSYVQLAADGTLHAGGSA EEEECCCCCEEHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEECCEEECCCCC QNAANLVPSLQSNGALNLGIAGGAPFVAVDANNAIVGSGNYSPDFSTCFSFLFNPTQAGL CCHHHHCCCCCCCCCEEEEECCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHCCHHHCH DNHLKAFVGGDLSTEDLNLALVKVIWDLTGGCFLAIGLGPLIGNADRLGPGVYRLLEGYP HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCHHCCHHHHHHHHCCH SVMRAINGLVATVGNNRTASAGALLTVLVAVYEAGVFMPLLRLVLSMAGWWALSMALVTI HHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LTKVLGGAASAGATVAAELITSFAIWAYQTTMDVLAYVASTSAGAAFLIAQDDRSAAPSP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC LLEA CCCC >Mature Secondary Structure AATYGLKDVTAQVAALVNRNAAPQTLSVAANNATFTDTWPNHAKVLTVVYRYDDGATRT CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCCCCCCEEEEEEEEECCCCCEE VAAKEGATLSVGATEFAQADAQAGDIAATGPVLTIWGASYGPVDVTAKVQGLVQQSDQTL EEECCCCEEEECCHHHHHCCCCCCCEEECCCEEEEECCCCCCEEEHHHHHHHHHCCCCEE DITANNATFTDTWPNNVKTLVVVASYTGQVPFIDIVVEGSPYALRYRPHLQVLSAFWGLQ EEEECCCEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHHHHHCHH DVTGILQANVRQRHVSLPASNAVFGDGWPGNAKTLCVVFQYADYAPQSSIIQEGGTLTID HHHHHHHHCHHHHEECCCCCCCEECCCCCCCCCEEEEEEEECCCCCCHHHHHCCCEEEEE YTASTPAYTPPVDPAALNIIAASYGRSDVTAKVAGLVSGQALNITANNATFGDSWPNVAK EECCCCCCCCCCCHHHHEEEEECCCCCCHHHHHHHEECCCEEEEEECCCCCCCCCHHHHH SFVAVYSWGSAAISSTVVREGQPVALTRPEPAFAIDQNFVSMAGLFATGDEIKLSAAAGG HHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCEEECCHHHHHHHEEECCCCEEEEEECCC FWQVGANQQIVASAASSAAAETFTLSIPGAAGSPIVQLRCSDGSYVQLAADGTLHAGGSA EEEECCCCCEEHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEECCEEECCCCC QNAANLVPSLQSNGALNLGIAGGAPFVAVDANNAIVGSGNYSPDFSTCFSFLFNPTQAGL CCHHHHCCCCCCCCCEEEEECCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHCCHHHCH DNHLKAFVGGDLSTEDLNLALVKVIWDLTGGCFLAIGLGPLIGNADRLGPGVYRLLEGYP HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCHHCCHHHHHHHHCCH SVMRAINGLVATVGNNRTASAGALLTVLVAVYEAGVFMPLLRLVLSMAGWWALSMALVTI HHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LTKVLGGAASAGATVAAELITSFAIWAYQTTMDVLAYVASTSAGAAFLIAQDDRSAAPSP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC LLEA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA