| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244852
Identifier: 21244852
GI number: 21244852
Start: 4858635
End: 4859336
Strand: Reverse
Name: 21244852
Synonym: XAC4135
Alternate gene names: NA
Gene position: 4859336-4858635 (Counterclockwise)
Preceding gene: 21244853
Following gene: 21244845
Centisome position: 93.89
GC content: 67.09
Gene sequence:
>702_bases GTGTGGCTGGCGGCTTTCGGCGCGATGGCGGCCGGTCCGACGCCCGGCGAATACGGCACCAAGCAAGGCTGGGGCAGCCT GCAGGTCGGCGACAAGGGTGGGGCGCGCCACTTCGAGATGCTTGCGGTGGGTGCCAACGGCCACACCTGTTCCTTGGAGG GCACGCTGCGAGGCGACACGGCGGAAGTGAGCGATGCCAGCGACACGCCGTGCAAGCTCGCGTTCAAGCCGGTGGCAGGT GGCTTCAGCATCGCCGCACTGACGCCAGACAGCTGCCGGGATTACTGCGGCATGCGCGCCAGCTTCGAAGGCGACTATCT GCAGTTGCCTGCCGGCTGCACCTCCGCGGCCAGCAGCCGACGACGTGAGGCGTACCTGCGGGATTATCGTGGCAAGCGCT ATAGCGAAGCACTTGCCGGCATGCAGGCGTTCGCGGGCGAGTGCGGCGAGTTCCTCAACTGGCTCGATCGCGACCGTTTC GCCAACGACCGCGCGCTCACCCTGCTGCGGCTGAACCGCCCGCAAGAATGCCTGGCGGCACTGGATCAGACCATGGCCGG TCGCAGCCGCGACGAGGCGTCGTTCCAGGCGGAGATGGACAAGGACAGCACGATGTTGCCGCCCAGCGACTGGGATGCAT ACCTGCCCATCGCCAAGTCCACCTGGTTCAATCGCAAGCTCTGCGAGGCGGCCAAGGGCTGA
Upstream 100 bases:
>100_bases CGCGACACTCGCCTGGCGTCGCCGCGATGCCGCACACTTGCCGCTTGGTCGAACACAGGACGAAGCAATGGCACGGCGAT ATGGATGGAGCGGGATACTG
Downstream 100 bases:
>100_bases GGACGATGACGTGTTTTGCTGCGCGCAGGGAAGCCCTTGCGCGCAGCATCGCATGGATGGTCGCTCGCTCGCTCGTGCGT GATCGAGGGGATGCTGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MWLAAFGAMAAGPTPGEYGTKQGWGSLQVGDKGGARHFEMLAVGANGHTCSLEGTLRGDTAEVSDASDTPCKLAFKPVAG GFSIAALTPDSCRDYCGMRASFEGDYLQLPAGCTSAASSRRREAYLRDYRGKRYSEALAGMQAFAGECGEFLNWLDRDRF ANDRALTLLRLNRPQECLAALDQTMAGRSRDEASFQAEMDKDSTMLPPSDWDAYLPIAKSTWFNRKLCEAAKG
Sequences:
>Translated_233_residues MWLAAFGAMAAGPTPGEYGTKQGWGSLQVGDKGGARHFEMLAVGANGHTCSLEGTLRGDTAEVSDASDTPCKLAFKPVAG GFSIAALTPDSCRDYCGMRASFEGDYLQLPAGCTSAASSRRREAYLRDYRGKRYSEALAGMQAFAGECGEFLNWLDRDRF ANDRALTLLRLNRPQECLAALDQTMAGRSRDEASFQAEMDKDSTMLPPSDWDAYLPIAKSTWFNRKLCEAAKG >Mature_233_residues MWLAAFGAMAAGPTPGEYGTKQGWGSLQVGDKGGARHFEMLAVGANGHTCSLEGTLRGDTAEVSDASDTPCKLAFKPVAG GFSIAALTPDSCRDYCGMRASFEGDYLQLPAGCTSAASSRRREAYLRDYRGKRYSEALAGMQAFAGECGEFLNWLDRDRF ANDRALTLLRLNRPQECLAALDQTMAGRSRDEASFQAEMDKDSTMLPPSDWDAYLPIAKSTWFNRKLCEAAKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25256; Mature: 25256
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLAAFGAMAAGPTPGEYGTKQGWGSLQVGDKGGARHFEMLAVGANGHTCSLEGTLRGDT CCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCC AEVSDASDTPCKLAFKPVAGGFSIAALTPDSCRDYCGMRASFEGDYLQLPAGCTSAASSR CCCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCEEECCCCCCHHHHHH RREAYLRDYRGKRYSEALAGMQAFAGECGEFLNWLDRDRFANDRALTLLRLNRPQECLAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH LDQTMAGRSRDEASFQAEMDKDSTMLPPSDWDAYLPIAKSTWFNRKLCEAAKG HHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCC >Mature Secondary Structure MWLAAFGAMAAGPTPGEYGTKQGWGSLQVGDKGGARHFEMLAVGANGHTCSLEGTLRGDT CCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCC AEVSDASDTPCKLAFKPVAGGFSIAALTPDSCRDYCGMRASFEGDYLQLPAGCTSAASSR CCCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCEEECCCCCCHHHHHH RREAYLRDYRGKRYSEALAGMQAFAGECGEFLNWLDRDRFANDRALTLLRLNRPQECLAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH LDQTMAGRSRDEASFQAEMDKDSTMLPPSDWDAYLPIAKSTWFNRKLCEAAKG HHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA