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The map label for this gene is 21244837

Identifier: 21244837

GI number: 21244837

Start: 4837525

End: 4838880

Strand: Reverse

Name: 21244837

Synonym: XAC4120

Alternate gene names: NA

Gene position: 4838880-4837525 (Counterclockwise)

Preceding gene: 21244838

Following gene: 21244836

Centisome position: 93.49

GC content: 69.54

Gene sequence:

>1356_bases
GTGGCGAACGCTGAAGACCTCCGGCGGTATCGCATTCCACTTCGGCAGCGAATTCGCCGGGTTGGACCTGCAATTGTGGG
CGATCCGGAGCTGAGCATGAGCCGACCTGTTGCCGATCTGGCGCCAGCCTACGCCGCACCGCTGCCGGCCGCAGGGGGCA
CCGGCGTGCCCAGCGAAGACACCGACATCAGCGAATTGCTGGGCCGCAGCGTCAACCCGTTGGTGCAGGCCGCCACGCCG
CTGCTGCTGTTGGCGGTGCAGTTGCGCCACAGTGCGCAATCGCCCGATGTGGCCCGCCTGCGCGAGCAGGTGATGGCGCA
GGTGCGCCGCTTCGAACACCGTGCGCGCGATGGAGGCGCGCCGGTGGAAGCGGTCACCGCCGCGCGCTACGTGTTGTGCG
CGCTGCTGGACGAAGCGGTGCTCAACGCACCGTGGGGCGAGCGCAGCGGCTGGTCGCAGAAGACCTTGCTGGTGACCTTC
CACAGCGAATCGTACGGCGGCGCCAAGTTCTTCCAGATCCTGGAGCGCTTGTGCGCCGATATGCCGCGGCATCTGGACTT
GATCGAGTTGATGTACCTGTGCCTGGCGCTGGGGTTCGTCGGCCGCTACCAGATCGAGGCCGGCGGCATCGCGACGCTGG
CGGCCATCCAGGAGGATGTCTATCGCCGCATCCGTGCGGCGCGCGGCCCCGCGCCGGACAGCTTGGCGCCGCGTTGGCGC
GGGGTGGAAGACCGCCGCCGGCTGGGCCGTTATCTGCCGGTGTGGGCGGCTGCATTGCTGGGGTTGAGCCTGGTGGTGGT
GGCGTTCGTGTGGTTGCAGGCGCGTTTGAACAGCCTGTCCGCACCGATCAGTGCGCAGGCCGCCCAATGGGGAATTGCGC
CGGCCACGCCGCCGGACGCTGCACCCGTGCCGCCGCCTCCGGTGCGGCTCAAGCAGTTGCTCTCCGCGCAGGAACGCGCC
GGCCTGCTGCGCGTGGACGAACAGGCCGACGGGCAGACGCGCGTGCGCCTCAGCAGCGCGGCGATGTTCGCCTCCGGCGG
GGTGGAGGTGGAGCTGCAGCAGCGCGGCTTGATCGCGCAGATTGCAGCGGCCATCGAGCAATTGCCGGGGCGGGTGATCG
TGGTCGGGCACACCGATGACGTGCCGGTGCGCTCGCTGCGCTTCCAGGACAACTACGCCTTGTCGGCCGCGCGTGCGCAG
GCGCTTGCGCAGGTGTTGCAGGCGCAGCTGAGCACGCCGGGGCGGGTGGAAGCCATTGGCGCCGGCGCTTCGCAACCGAT
CGCACAGCCGGTGCAATTACCGGCCAACCGCGCGCGCAACCGCCGCGTGGAGATCTTGTTCCAGCCTGGGGAATGA

Upstream 100 bases:

>100_bases
AGTTGCCCGGCATCGTGGCCACGCCCATGCCGGTGGCGCCGCGACAGATTCCGTATCACGCCGGCTATCTGTATTTCGAA
TTCGACAAGAGCGCAGCGTT

Downstream 100 bases:

>100_bases
CGATGAAGACGCTGTTGTCCAAGCTGAGCGCAACGGTGGTGGTCGGCCTGTTGGCGCTGTGCCTGCTGTCGGTGTTGCTG
TGGGTGGGTGGGCCGTATGT

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA Family Protein; Type VI Secretion System OmpA/MotB Family Protein; OmpA/MotB Domain-Containing Protein; OmpA/MotB Domain Protein; DotU Family Type IV/VI Secretion System Protein; Outer Membrane Protein; Type VI Secretion System Core Protein; OmpA/MotB; SciP Protein; Flagellar Motor Rotation Protein MotB; Replication/Virulence Associated Protein; Ompa/Motb Domain Protein; Type IV/VI Secretion System Protein; DotU Family Type IV / VI Secretion System Protein; Outer Membrane Porin Involved In Nitrogen Fixation; Type VI Secretion System Protein ImpK; Aspartyl/Glutamyl-TRNA(Asn/Gln) Amidotransferase Subunit B; OmpA-Family Protein; Type IV / VI Secretion System Protein; Type VI Secretion; Outer Membrane Protein Ompa/Motb Family; OmpA-Type Porin; OmpA-Like Porin; OmpA/MotB Family Outer Membrane Protein; T6ss U; Flagellar Motor Protein; OmpA/MotB-Family Outer Membrane Protein; Type IV / VI Secretion System Family Protein DotU; Type VI Secretion System VasF

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MANAEDLRRYRIPLRQRIRRVGPAIVGDPELSMSRPVADLAPAYAAPLPAAGGTGVPSEDTDISELLGRSVNPLVQAATP
LLLLAVQLRHSAQSPDVARLREQVMAQVRRFEHRARDGGAPVEAVTAARYVLCALLDEAVLNAPWGERSGWSQKTLLVTF
HSESYGGAKFFQILERLCADMPRHLDLIELMYLCLALGFVGRYQIEAGGIATLAAIQEDVYRRIRAARGPAPDSLAPRWR
GVEDRRRLGRYLPVWAAALLGLSLVVVAFVWLQARLNSLSAPISAQAAQWGIAPATPPDAAPVPPPPVRLKQLLSAQERA
GLLRVDEQADGQTRVRLSSAAMFASGGVEVELQQRGLIAQIAAAIEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQ
ALAQVLQAQLSTPGRVEAIGAGASQPIAQPVQLPANRARNRRVEILFQPGE

Sequences:

>Translated_451_residues
MANAEDLRRYRIPLRQRIRRVGPAIVGDPELSMSRPVADLAPAYAAPLPAAGGTGVPSEDTDISELLGRSVNPLVQAATP
LLLLAVQLRHSAQSPDVARLREQVMAQVRRFEHRARDGGAPVEAVTAARYVLCALLDEAVLNAPWGERSGWSQKTLLVTF
HSESYGGAKFFQILERLCADMPRHLDLIELMYLCLALGFVGRYQIEAGGIATLAAIQEDVYRRIRAARGPAPDSLAPRWR
GVEDRRRLGRYLPVWAAALLGLSLVVVAFVWLQARLNSLSAPISAQAAQWGIAPATPPDAAPVPPPPVRLKQLLSAQERA
GLLRVDEQADGQTRVRLSSAAMFASGGVEVELQQRGLIAQIAAAIEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQ
ALAQVLQAQLSTPGRVEAIGAGASQPIAQPVQLPANRARNRRVEILFQPGE
>Mature_450_residues
ANAEDLRRYRIPLRQRIRRVGPAIVGDPELSMSRPVADLAPAYAAPLPAAGGTGVPSEDTDISELLGRSVNPLVQAATPL
LLLAVQLRHSAQSPDVARLREQVMAQVRRFEHRARDGGAPVEAVTAARYVLCALLDEAVLNAPWGERSGWSQKTLLVTFH
SESYGGAKFFQILERLCADMPRHLDLIELMYLCLALGFVGRYQIEAGGIATLAAIQEDVYRRIRAARGPAPDSLAPRWRG
VEDRRRLGRYLPVWAAALLGLSLVVVAFVWLQARLNSLSAPISAQAAQWGIAPATPPDAAPVPPPPVRLKQLLSAQERAG
LLRVDEQADGQTRVRLSSAAMFASGGVEVELQQRGLIAQIAAAIEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQA
LAQVLQAQLSTPGRVEAIGAGASQPIAQPVQLPANRARNRRVEILFQPGE

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48753; Mature: 48622

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANAEDLRRYRIPLRQRIRRVGPAIVGDPELSMSRPVADLAPAYAAPLPAAGGTGVPSED
CCCHHHHHHHHCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
TDISELLGRSVNPLVQAATPLLLLAVQLRHSAQSPDVARLREQVMAQVRRFEHRARDGGA
CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PVEAVTAARYVLCALLDEAVLNAPWGERSGWSQKTLLVTFHSESYGGAKFFQILERLCAD
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
MPRHLDLIELMYLCLALGFVGRYQIEAGGIATLAAIQEDVYRRIRAARGPAPDSLAPRWR
CCCCCCHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GVEDRRRLGRYLPVWAAALLGLSLVVVAFVWLQARLNSLSAPISAQAAQWGIAPATPPDA
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
APVPPPPVRLKQLLSAQERAGLLRVDEQADGQTRVRLSSAAMFASGGVEVELQQRGLIAQ
CCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCEEEEHHHHHHHCCCCEEEEHHCCHHHH
IAAAIEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVEAIG
HHHHHHHCCCCEEEEECCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
AGASQPIAQPVQLPANRARNRRVEILFQPGE
CCCCCCCCCHHHCCHHHCCCCEEEEEECCCC
>Mature Secondary Structure 
ANAEDLRRYRIPLRQRIRRVGPAIVGDPELSMSRPVADLAPAYAAPLPAAGGTGVPSED
CCHHHHHHHHCHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
TDISELLGRSVNPLVQAATPLLLLAVQLRHSAQSPDVARLREQVMAQVRRFEHRARDGGA
CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PVEAVTAARYVLCALLDEAVLNAPWGERSGWSQKTLLVTFHSESYGGAKFFQILERLCAD
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
MPRHLDLIELMYLCLALGFVGRYQIEAGGIATLAAIQEDVYRRIRAARGPAPDSLAPRWR
CCCCCCHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GVEDRRRLGRYLPVWAAALLGLSLVVVAFVWLQARLNSLSAPISAQAAQWGIAPATPPDA
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
APVPPPPVRLKQLLSAQERAGLLRVDEQADGQTRVRLSSAAMFASGGVEVELQQRGLIAQ
CCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCEEEEHHHHHHHCCCCEEEEHHCCHHHH
IAAAIEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVEAIG
HHHHHHHCCCCEEEEECCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
AGASQPIAQPVQLPANRARNRRVEILFQPGE
CCCCCCCCCHHHCCHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA