| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244835
Identifier: 21244835
GI number: 21244835
Start: 4833465
End: 4833995
Strand: Reverse
Name: 21244835
Synonym: XAC4118
Alternate gene names: NA
Gene position: 4833995-4833465 (Counterclockwise)
Preceding gene: 21244836
Following gene: 21244834
Centisome position: 93.4
GC content: 71.56
Gene sequence:
>531_bases ATGCCGGCGCACGAACCACTCGGCTTCCACGGCAAGTTGCCTGGCGTGGGCGACTTCGTGCAGCGGCGCCTGCCGGCCAG CTTCGTGCAGACGTGGGACCTGCACTTCGCCAACTGCCTGGACACGGTGCGCCAGCCGCTCGGGCAGCACTGGCCTGGCG CGTATCGCAACAGCGGTCTGCGCGCGTTTGCGTTGGGGCCGGGCGTGTGCGGGGCGCAGGCCTGGGCCGGCATGCTCGGC CCGGGCGAAGACCGCGTGGGGCGCTGTTTTCCGCTGACCGTGGCGATGCCCTTGCCGCACATGTGCCTGCCGCCGGCGGC ATGGTTCGGCGCGGTGGCCGCGTGCCTGGGCCGCAGCTTGCGCGCGCGCACCGATGCAGCCGGATTCGATGCGGCGCTGC TTGCGCTCGGCGTGCCGGCCGCGCCTTCCAGCACGTACGCACCGGTGCACGGCGAATCGTGGTGGTGGCGACTCGGTGCG GCCGCACAGGCAATGCATGGGCTGCCCACTGCAGAGACGTATCTGGATTGA
Upstream 100 bases:
>100_bases CGCTTGGCGGCCACGACGTGCAGGTGCCGCTGCGTGCCGGCAACCTGCGCCACCCGTTTCTGGACCGCGACGTCCAGCAC TTCGCGTGCGGCGGATGAGC
Downstream 100 bases:
>100_bases TTGCTGGCCGAGCAGGACATCACCGAGGTGACCCGATGAACGCGCCCTACCAATCGGCCGGGCACACCGAAACCGGCAAG GTGCGCCGTCTCAACGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MPAHEPLGFHGKLPGVGDFVQRRLPASFVQTWDLHFANCLDTVRQPLGQHWPGAYRNSGLRAFALGPGVCGAQAWAGMLG PGEDRVGRCFPLTVAMPLPHMCLPPAAWFGAVAACLGRSLRARTDAAGFDAALLALGVPAAPSSTYAPVHGESWWWRLGA AAQAMHGLPTAETYLD
Sequences:
>Translated_176_residues MPAHEPLGFHGKLPGVGDFVQRRLPASFVQTWDLHFANCLDTVRQPLGQHWPGAYRNSGLRAFALGPGVCGAQAWAGMLG PGEDRVGRCFPLTVAMPLPHMCLPPAAWFGAVAACLGRSLRARTDAAGFDAALLALGVPAAPSSTYAPVHGESWWWRLGA AAQAMHGLPTAETYLD >Mature_175_residues PAHEPLGFHGKLPGVGDFVQRRLPASFVQTWDLHFANCLDTVRQPLGQHWPGAYRNSGLRAFALGPGVCGAQAWAGMLGP GEDRVGRCFPLTVAMPLPHMCLPPAAWFGAVAACLGRSLRARTDAAGFDAALLALGVPAAPSSTYAPVHGESWWWRLGAA AQAMHGLPTAETYLD
Specific function: Unknown
COG id: COG3913
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18681; Mature: 18549
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAHEPLGFHGKLPGVGDFVQRRLPASFVQTWDLHFANCLDTVRQPLGQHWPGAYRNSGL CCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC RAFALGPGVCGAQAWAGMLGPGEDRVGRCFPLTVAMPLPHMCLPPAAWFGAVAACLGRSL EEEEECCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHH RARTDAAGFDAALLALGVPAAPSSTYAPVHGESWWWRLGAAAQAMHGLPTAETYLD HHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure PAHEPLGFHGKLPGVGDFVQRRLPASFVQTWDLHFANCLDTVRQPLGQHWPGAYRNSGL CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC RAFALGPGVCGAQAWAGMLGPGEDRVGRCFPLTVAMPLPHMCLPPAAWFGAVAACLGRSL EEEEECCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHH RARTDAAGFDAALLALGVPAAPSSTYAPVHGESWWWRLGAAAQAMHGLPTAETYLD HHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA