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The map label for this gene is ptc1 [H]

Identifier: 21244834

GI number: 21244834

Start: 4832713

End: 4833429

Strand: Reverse

Name: ptc1 [H]

Synonym: XAC4117

Alternate gene names: 21244834

Gene position: 4833429-4832713 (Counterclockwise)

Preceding gene: 21244835

Following gene: 21244833

Centisome position: 93.39

GC content: 68.06

Gene sequence:

>717_bases
ATGAACGCGCCCTACCAATCGGCCGGGCACACCGAAACCGGCAAGGTGCGCCGTCTCAACGAAGATGCCTTGCTGCTGCG
CGAAGACGCCGGGCTGTGGGTGGTGGCCGATGGCCTGGGTGGCCACAGTGCCGGCGACTACGCCAGCCAGTTGCTGGTGC
AGCGGCTGAGGGCGTTGGTGCGCCCGGCCGACCTGTGCGATTTCCTGGATGCCATCGACGACACCCTGGCGCAGATCAAC
CGCGAGCTGCTGCAGGTCGCGCGCGAGCGCCGCGTGGACATGATCGCCACCACCGTGGTGGTGCTGGTGCACGACCCGGA
TTTCATGCTGTGCGGCTGGGTCGGCGACAGCCGCATCTATGCGCAACACGGCGGCCCGCTGCGTCAGCTCACACGCGACC
ACGTGCATGGCGTGCGCGAGGACATCACCCAGTTTGGCGGTGCGCAGGCCAGTGCTGCGGCGGCCGGCGTGCTCACGCGC
GCGGTCGGCGCGCAGGAGCCGCTGTTCGTCGATTGGGTGCTGACGCCGAGCCTGCCGGGCACGCAATTCCTGTTGTGCAG
CGACGGCATCAATAAGGAAATCCCAGACCCGGAACTGGATGCCGAATGCCATCGCTTCGGCGATCCGCGCGCGCTGCTGG
CGCGTCTGTTCGAGTTGGCGATGGGGAGGGCGGCACGCGACAACGTCACCGCCGTCGTCGTCCGCCTGCAGGAGTAA

Upstream 100 bases:

>100_bases
GGCGACTCGGTGCGGCCGCACAGGCAATGCATGGGCTGCCCACTGCAGAGACGTATCTGGATTGATTGCTGGCCGAGCAG
GACATCACCGAGGTGACCCG

Downstream 100 bases:

>100_bases
GTGCATGCACGAAGACACCGCCACCGTGACCGAACTGGTCACCGCCATGCGCCGCGGCGCACTCGACCTCAACGCGGTCC
TGGCCGCGCTGGGCAGGCGC

Product: phosphoprotein phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNAPYQSAGHTETGKVRRLNEDALLLREDAGLWVVADGLGGHSAGDYASQLLVQRLRALVRPADLCDFLDAIDDTLAQIN
RELLQVARERRVDMIATTVVVLVHDPDFMLCGWVGDSRIYAQHGGPLRQLTRDHVHGVREDITQFGGAQASAAAAGVLTR
AVGAQEPLFVDWVLTPSLPGTQFLLCSDGINKEIPDPELDAECHRFGDPRALLARLFELAMGRAARDNVTAVVVRLQE

Sequences:

>Translated_238_residues
MNAPYQSAGHTETGKVRRLNEDALLLREDAGLWVVADGLGGHSAGDYASQLLVQRLRALVRPADLCDFLDAIDDTLAQIN
RELLQVARERRVDMIATTVVVLVHDPDFMLCGWVGDSRIYAQHGGPLRQLTRDHVHGVREDITQFGGAQASAAAAGVLTR
AVGAQEPLFVDWVLTPSLPGTQFLLCSDGINKEIPDPELDAECHRFGDPRALLARLFELAMGRAARDNVTAVVVRLQE
>Mature_238_residues
MNAPYQSAGHTETGKVRRLNEDALLLREDAGLWVVADGLGGHSAGDYASQLLVQRLRALVRPADLCDFLDAIDDTLAQIN
RELLQVARERRVDMIATTVVVLVHDPDFMLCGWVGDSRIYAQHGGPLRQLTRDHVHGVREDITQFGGAQASAAAAGVLTR
AVGAQEPLFVDWVLTPSLPGTQFLLCSDGINKEIPDPELDAECHRFGDPRALLARLFELAMGRAARDNVTAVVVRLQE

Specific function: Protein phosphatase that dephosphorylates EF-Tu [H]

COG id: COG0631

COG function: function code T; Serine/threonine protein phosphatase

Gene ontology:

Cell location: Cytoplasm. Membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015655
- InterPro:   IPR001932
- InterPro:   IPR014045 [H]

Pfam domain/function: PF00481 PP2C [H]

EC number: =3.1.3.16 [H]

Molecular weight: Translated: 25981; Mature: 25981

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPYQSAGHTETGKVRRLNEDALLLREDAGLWVVADGLGGHSAGDYASQLLVQRLRALV
CCCCCCCCCCCCCCCEEEECCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC
RPADLCDFLDAIDDTLAQINRELLQVARERRVDMIATTVVVLVHDPDFMLCGWVGDSRIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCEEEEEECCCCEEE
AQHGGPLRQLTRDHVHGVREDITQFGGAQASAAAAGVLTRAVGAQEPLFVDWVLTPSLPG
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
TQFLLCSDGINKEIPDPELDAECHRFGDPRALLARLFELAMGRAARDNVTAVVVRLQE
CEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MNAPYQSAGHTETGKVRRLNEDALLLREDAGLWVVADGLGGHSAGDYASQLLVQRLRALV
CCCCCCCCCCCCCCCEEEECCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC
RPADLCDFLDAIDDTLAQINRELLQVARERRVDMIATTVVVLVHDPDFMLCGWVGDSRIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCEEEEEECCCCEEE
AQHGGPLRQLTRDHVHGVREDITQFGGAQASAAAAGVLTRAVGAQEPLFVDWVLTPSLPG
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
TQFLLCSDGINKEIPDPELDAECHRFGDPRALLARLFELAMGRAARDNVTAVVVRLQE
CEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]