| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244817
Identifier: 21244817
GI number: 21244817
Start: 4802883
End: 4803629
Strand: Reverse
Name: 21244817
Synonym: XAC4100
Alternate gene names: NA
Gene position: 4803629-4802883 (Counterclockwise)
Preceding gene: 77748755
Following gene: 21244816
Centisome position: 92.81
GC content: 67.34
Gene sequence:
>747_bases ATGTCCAAGCCAACAAGACCGTCTGATCTGCCAACTGCGCCATCCCCCGACGCACCCGCGTGGGTGCTGGGGCTGGGCGT TCTGCTGGCGGTGGCGTATTCGCCGCTGGCGCATTGGGCCAATGCCAGTCACCGCCCGGAATTGGCCGTCATCGCCGGTG GTTTGCTGGTGCTGATGGTGTTGATCGAACCGATGGTTGCGCGCCGGCCCTGGGCCTGGGCGTTGGCGCTGCTGCTGCTT GCCGGGCTGGGCGCGCTGTGGCATTCGCCGTATGCGATGTTGGTGCTGGCGGCGCCGCCGGTGGTGTTTACCGGTTGGGT GGCCTGGTTTTTCGGGCGCAGCCTGCGGGCCGGGCGCACGCCGCTGATCACGCGCATTGTTGAAGGCCTGTACGGCCAGG CCGGCATGCCGATCACGCCCGAACAACGCCGCTACACGCGCCGCCTCACGCTGGCCTGGGCAGTGCTGCTGTGCGGCCTG ACCCTGGCCAATCTGGTGCTGGGTCTGTGCGCCGAGCCCAGCGGCGTGCTCGCGCAGCTGGGCCATGCCTCGCCGCTGCC GATCAGCGACGCGCGCGCCTCGTTGTTCGCCAACCTGCTCGCCTATGGGGTGATTGGCGGCTTCTTCGTTGCGGAATATC TATTGCGCGGTCGCTGGTTTCCACAGCGCCCCTATCGTAATCTGCCAGACTTCTTGCGTCAGATGGCGCGGCTCGGGCCG GATTTCTGGCGCGATCTGCTGCGCTGA
Upstream 100 bases:
>100_bases GAACTGGCGCTGGCGATCAGCAAGCGCTACGGCTTCCAGTTGCGCTCGGACAACGACGAAAACCGTCGCATCTTCGCGTC GCTGCGCGCACTGTCGGCGC
Downstream 100 bases:
>100_bases GTGCGTGGCCTGGGGCAGCGACGGACGTGCATATTTTCGGGGGCAAGACAAAAATGCCGTTGGCAAGGATGCCGCCGCGC CTGGCGTGGGCTGGGTTCAA
Product: ketosynthase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSKPTRPSDLPTAPSPDAPAWVLGLGVLLAVAYSPLAHWANASHRPELAVIAGGLLVLMVLIEPMVARRPWAWALALLLL AGLGALWHSPYAMLVLAAPPVVFTGWVAWFFGRSLRAGRTPLITRIVEGLYGQAGMPITPEQRRYTRRLTLAWAVLLCGL TLANLVLGLCAEPSGVLAQLGHASPLPISDARASLFANLLAYGVIGGFFVAEYLLRGRWFPQRPYRNLPDFLRQMARLGP DFWRDLLR
Sequences:
>Translated_248_residues MSKPTRPSDLPTAPSPDAPAWVLGLGVLLAVAYSPLAHWANASHRPELAVIAGGLLVLMVLIEPMVARRPWAWALALLLL AGLGALWHSPYAMLVLAAPPVVFTGWVAWFFGRSLRAGRTPLITRIVEGLYGQAGMPITPEQRRYTRRLTLAWAVLLCGL TLANLVLGLCAEPSGVLAQLGHASPLPISDARASLFANLLAYGVIGGFFVAEYLLRGRWFPQRPYRNLPDFLRQMARLGP DFWRDLLR >Mature_247_residues SKPTRPSDLPTAPSPDAPAWVLGLGVLLAVAYSPLAHWANASHRPELAVIAGGLLVLMVLIEPMVARRPWAWALALLLLA GLGALWHSPYAMLVLAAPPVVFTGWVAWFFGRSLRAGRTPLITRIVEGLYGQAGMPITPEQRRYTRRLTLAWAVLLCGLT LANLVLGLCAEPSGVLAQLGHASPLPISDARASLFANLLAYGVIGGFFVAEYLLRGRWFPQRPYRNLPDFLRQMARLGPD FWRDLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27146; Mature: 27014
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPTRPSDLPTAPSPDAPAWVLGLGVLLAVAYSPLAHWANASHRPELAVIAGGLLVLMV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LIEPMVARRPWAWALALLLLAGLGALWHSPYAMLVLAAPPVVFTGWVAWFFGRSLRAGRT HHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC PLITRIVEGLYGQAGMPITPEQRRYTRRLTLAWAVLLCGLTLANLVLGLCAEPSGVLAQL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GHASPLPISDARASLFANLLAYGVIGGFFVAEYLLRGRWFPQRPYRNLPDFLRQMARLGP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCH DFWRDLLR HHHHHHHC >Mature Secondary Structure SKPTRPSDLPTAPSPDAPAWVLGLGVLLAVAYSPLAHWANASHRPELAVIAGGLLVLMV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LIEPMVARRPWAWALALLLLAGLGALWHSPYAMLVLAAPPVVFTGWVAWFFGRSLRAGRT HHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC PLITRIVEGLYGQAGMPITPEQRRYTRRLTLAWAVLLCGLTLANLVLGLCAEPSGVLAQL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GHASPLPISDARASLFANLLAYGVIGGFFVAEYLLRGRWFPQRPYRNLPDFLRQMARLGP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCH DFWRDLLR HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA