| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244733
Identifier: 21244733
GI number: 21244733
Start: 4706270
End: 4707169
Strand: Reverse
Name: 21244733
Synonym: XAC4016
Alternate gene names: NA
Gene position: 4707169-4706270 (Counterclockwise)
Preceding gene: 21244734
Following gene: 21244727
Centisome position: 90.95
GC content: 70.11
Gene sequence:
>900_bases ATGTATGTGCGTGCCCTCATCGTCGTTTTGATCGTCCTCAACGCCGGGGTGGCGTTGTGGTGGGCCTTGCAGCCGCCATC GGCACCACCGTCGGCGCCGCCGCAGCCGAGCGGTGTGGCGCGGCTGGAGTTGCTGCCAACAGTGACCGGTGCTGGCGAAG CTGTGCTGCCGGCTGCAGCGCATACGGGATCGGGGTCTGCGGCAGAGAGTGCGTCGACAGCACCGGCGCCATCGACATCG ACATCGACAGCATCCGGGCTTGCATCCGTACCCACGCCGGCCACGTCGGCAGTTGCGGGTCCCTCCACGCCCACGTCTGC AGCGCCGACACCGGCCACCACTGCTGCAGCGGAAGCGCCGCGCAGCGCATCGGAAGCTGCTGCGAAACCAGCCAATGGCG TCGCCACGACGGCTGCACAATCATCGCCCGCGCCATCCCCGCCTGCCGCAGAGCGCTGCGCCAGCCTGGGACCCTTTGCG GCACGCGCCGATGCCGATGCCGCGCTGGCGCGCGTACGTGGGCAGGCCAGCCGCGCCAGCGTGCGCGAGGACAAGGACGC CGGCATCAGCACATTTCGGGTGATGTTGCCCAATGTGGGCGATCGCGCGGCTGCGCAGGCCTTGGTCAAGCGCATTGCCG CGGCCGGGATGGGCGACTACTACGTGATCGCGCAGGGCGAGGACAACACCGTGGCGCTGGGCCAGTACCAGAGCCGCGAG CGCGCCGAGCGGCGCCAGGCCAGCCTGGTCGGCGCAGGATTTCCGGCGCAACTGGTGCCCAGCGGCAACGGCCAATCGCG GTGGTGGATCGATGTCCGCACCAGTGCGGCCACCAGCGCCCTGCAAGGGGCTGCCGGTGCCACGCGTCAGCGTTCGCTAG ATTGCGCCGCGCTGCGCTAG
Upstream 100 bases:
>100_bases GTTGCTGCCGCTGCTGCCCGATGCCACGTTCCGCGCGGCCCTGGTACTGGACGGTCTGGCGACGTGGGCGACCGCCGCGT CGTCGCCGTAGAATCGGGGC
Downstream 100 bases:
>100_bases AATGCGCACCGGCGCGCAACGCGCCTGCCTTCGCCGGCATAGCTCAGTTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTC CCCAGTTCGAATCCGGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MYVRALIVVLIVLNAGVALWWALQPPSAPPSAPPQPSGVARLELLPTVTGAGEAVLPAAAHTGSGSAAESASTAPAPSTS TSTASGLASVPTPATSAVAGPSTPTSAAPTPATTAAAEAPRSASEAAAKPANGVATTAAQSSPAPSPPAAERCASLGPFA ARADADAALARVRGQASRASVREDKDAGISTFRVMLPNVGDRAAAQALVKRIAAAGMGDYYVIAQGEDNTVALGQYQSRE RAERRQASLVGAGFPAQLVPSGNGQSRWWIDVRTSAATSALQGAAGATRQRSLDCAALR
Sequences:
>Translated_299_residues MYVRALIVVLIVLNAGVALWWALQPPSAPPSAPPQPSGVARLELLPTVTGAGEAVLPAAAHTGSGSAAESASTAPAPSTS TSTASGLASVPTPATSAVAGPSTPTSAAPTPATTAAAEAPRSASEAAAKPANGVATTAAQSSPAPSPPAAERCASLGPFA ARADADAALARVRGQASRASVREDKDAGISTFRVMLPNVGDRAAAQALVKRIAAAGMGDYYVIAQGEDNTVALGQYQSRE RAERRQASLVGAGFPAQLVPSGNGQSRWWIDVRTSAATSALQGAAGATRQRSLDCAALR >Mature_299_residues MYVRALIVVLIVLNAGVALWWALQPPSAPPSAPPQPSGVARLELLPTVTGAGEAVLPAAAHTGSGSAAESASTAPAPSTS TSTASGLASVPTPATSAVAGPSTPTSAAPTPATTAAAEAPRSASEAAAKPANGVATTAAQSSPAPSPPAAERCASLGPFA ARADADAALARVRGQASRASVREDKDAGISTFRVMLPNVGDRAAAQALVKRIAAAGMGDYYVIAQGEDNTVALGQYQSRE RAERRQASLVGAGFPAQLVPSGNGQSRWWIDVRTSAATSALQGAAGATRQRSLDCAALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29720; Mature: 29720
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVRALIVVLIVLNAGVALWWALQPPSAPPSAPPQPSGVARLELLPTVTGAGEAVLPAAA CHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCC HTGSGSAAESASTAPAPSTSTSTASGLASVPTPATSAVAGPSTPTSAAPTPATTAAAEAP CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC RSASEAAAKPANGVATTAAQSSPAPSPPAAERCASLGPFAARADADAALARVRGQASRAS CCHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHCCHHHHH VREDKDAGISTFRVMLPNVGDRAAAQALVKRIAAAGMGDYYVIAQGEDNTVALGQYQSRE HCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCHHHHH RAERRQASLVGAGFPAQLVPSGNGQSRWWIDVRTSAATSALQGAAGATRQRSLDCAALR HHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECHHHHHHHHHCCCCCHHCCCCHHCCC >Mature Secondary Structure MYVRALIVVLIVLNAGVALWWALQPPSAPPSAPPQPSGVARLELLPTVTGAGEAVLPAAA CHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCC HTGSGSAAESASTAPAPSTSTSTASGLASVPTPATSAVAGPSTPTSAAPTPATTAAAEAP CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC RSASEAAAKPANGVATTAAQSSPAPSPPAAERCASLGPFAARADADAALARVRGQASRAS CCHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHCCHHHHH VREDKDAGISTFRVMLPNVGDRAAAQALVKRIAAAGMGDYYVIAQGEDNTVALGQYQSRE HCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCHHHHH RAERRQASLVGAGFPAQLVPSGNGQSRWWIDVRTSAATSALQGAAGATRQRSLDCAALR HHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECHHHHHHHHHCCCCCHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA