| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is argI [H]
Identifier: 21244727
GI number: 21244727
Start: 4701066
End: 4701989
Strand: Reverse
Name: argI [H]
Synonym: XAC4009
Alternate gene names: 21244727
Gene position: 4701989-4701066 (Counterclockwise)
Preceding gene: 21244733
Following gene: 21244726
Centisome position: 90.85
GC content: 66.77
Gene sequence:
>924_bases ATGGCAACGCAGTACGTGCCGGTTTCCCTGATTGGCGTCCCTACCGACATCGGCGCGGGCCACCGCGGTGCGCGCATGGG ACCGGAGGCGCTACGCATCGCCGGCCTGCAGGAGGCGCTGGTCGGCCGCGGCGTGGAGGTGCGCGATCTGGGCAATCTGG ATGGTCCGCGCAATCCCTGGCAGGCGCCGCAGGCCGGCTACCGGCATCTGGACGAAGTGGTGGCGTGGAACCAGGCGCTG ATGGACGCCAGCTACGCCGAACTGCGTGCCGGGCGCATGCCGATCATGCTCGGTGGCGACCATTGCCTGGGCATCGGCTC GATCACGGCGGTGGCCAAGTACTGCCGCGAGCAGGGCAGGCCATTGCGGGTGCTGTGGCTGGATGCGCATTCGGATTTCA ACACCAGTGAGGTGACCCCTTCGGGCAACGTGCACGGCATGCCGGTGGCCTGCCTGTGCGGGCTGGGCCCCGAGGCGCTG ACGCACCTGGGCGGCAGTGCGCCGGCGTTGTTGCCCGAGCAGGTGCGGCAGATCGGCATCCGCTCGGTGGACCCGGAGGA GAAGCGGCTGATCAAGCAGCACCGCATCGATGTGTACGACATGCGCTACATCGACGAAGCCGGGATGAAGCGCACCATGG AAGCGGCATTGCAGGACATGAGCGCCGATACGCACCTGCACGTGAGTTTCGATGTGGATTTCCTCGACCCCAGCATCGCG CCGGGCGTGGGCACCACGGTGCCCGGTGGCCCCAACTACCGCGAGGCGCAACTGGTGATGGAGATGATTGCCGACACCGG GCGCATGGGGTCGTTGGATATCGTCGAACTCAACCCGGTGCTGGACAACCGCAACGCGACCGCCGAACTGGCGGTGGATC TGGTCGAAAGCCTGTTCGGCAAGTCGACGCTGATGCGGGATTGA
Upstream 100 bases:
>100_bases TCGCACTGTTCAGTACGGGCGACATGTGTGCTGCGCTGCCGCGCGTCACTGTGCGGGCGGGCAACTAGACTGCACGGCCT TATCGTGACTGGAGCAACGC
Downstream 100 bases:
>100_bases TGCCGTACCGAGCGCACCGCGACGCGTTCACATCAAATCCACGGCCGCGCAGTCAGATTTGGCGCCAAGCCAGGTGCGCT GGCACCGTATTGAACGAGGA
Product: arginase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLQEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQAL MDASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPEAL THLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD
Sequences:
>Translated_307_residues MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLQEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQAL MDASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPEAL THLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD >Mature_306_residues ATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLQEALVGRGVEVRDLGNLDGPRNPWQAPQAGYRHLDEVVAWNQALM DASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGRPLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPEALT HLGGSAPALLPEQVRQIGIRSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIAP GVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFGKSTLMRD
Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]
COG id: COG0010
COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginase family [H]
Homologues:
Organism=Homo sapiens, GI4502215, Length=308, Percent_Identity=36.038961038961, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI10947139, Length=309, Percent_Identity=34.3042071197411, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71996843, Length=207, Percent_Identity=32.8502415458937, Blast_Score=110, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6325146, Length=299, Percent_Identity=31.7725752508361, Blast_Score=144, Evalue=1e-35, Organism=Drosophila melanogaster, GI24638886, Length=304, Percent_Identity=33.2236842105263, Blast_Score=163, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014033 - InterPro: IPR006035 - InterPro: IPR020855 [H]
Pfam domain/function: PF00491 Arginase [H]
EC number: =3.5.3.1 [H]
Molecular weight: Translated: 33181; Mature: 33050
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00148 ARGINASE_2 ; PS01053 ARGINASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLQEALVGRGVEVRDLGNLDGPRNPW CCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC QAPQAGYRHLDEVVAWNQALMDASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGR CCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCCCEECHHHHHHHHHHHHHCCC PLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPEALTHLGGSAPALLPEQVRQIGI CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCHHHHHHCCC RSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCC PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFG CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC KSTLMRD CHHHCCC >Mature Secondary Structure ATQYVPVSLIGVPTDIGAGHRGARMGPEALRIAGLQEALVGRGVEVRDLGNLDGPRNPW CCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC QAPQAGYRHLDEVVAWNQALMDASYAELRAGRMPIMLGGDHCLGIGSITAVAKYCREQGR CCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCCCEECHHHHHHHHHHHHHCCC PLRVLWLDAHSDFNTSEVTPSGNVHGMPVACLCGLGPEALTHLGGSAPALLPEQVRQIGI CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCHHHHHHCCC RSVDPEEKRLIKQHRIDVYDMRYIDEAGMKRTMEAALQDMSADTHLHVSFDVDFLDPSIA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCC PGVGTTVPGGPNYREAQLVMEMIADTGRMGSLDIVELNPVLDNRNATAELAVDLVESLFG CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC KSTLMRD CHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9375792 [H]