| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244671
Identifier: 21244671
GI number: 21244671
Start: 4646821
End: 4649073
Strand: Direct
Name: 21244671
Synonym: XAC3952
Alternate gene names: NA
Gene position: 4646821-4649073 (Clockwise)
Preceding gene: 21244670
Following gene: 21244673
Centisome position: 89.78
GC content: 57.26
Gene sequence:
>2253_bases GTGACTTCTGATTTTCTCGACTGGGGGGACAGCATCCCCACAAATGAGGCTGTTCCATTCCGTGATGGCCGCATGCAAGC CCTCCTCAGGGCCTGCAATGCACATGCGGATATCAATGTTGTCGAGCTAAGACGCATTGAAGACCCATTTATTGCAGAGA TCATAGTGGCCGATGTTGGTGATGGTGCAGTGTCCCCTGGGAACGATGCAGGTATTCACCGCATCGAACGAATGGCACTT CTTTACCGCACTGGTGCTCGATTCCCATTCGAAGCTCGCCCCCTCAGGAAGACCTTCCCGAAAGCGCTGCATCAGTACGC TACGGGCAACGAAGGGCCGCCGTCGCTCTGCATCATGGAGGGAGACTGGGAGCTTGCGGAACACAGGTTCACACCAGAAG CGCTACTCGAGACCCTTCTAGCCTGGTTGGAGAAGACGGCAGATGGCACGATTCATGAGGCCGACCGCGGCTTGGAACCC GTCTTCTACAGCCTTGGGCAGTGCCTAATGCTTCCGCCAGACTTCGCGGAGGCTTTGAGCGATCCTTCTAAGGAGCTTGC TCTGATGGACGCTTGGGAATGGGAACGCGGGGTGACATATCGCACGCGCATTGTCGCGTCCGCGTCTTCGGCACGAGCGC CTCATCGCATACTCATCATGGATGCCGCCCCAATCGCGCACCTGCCACTCTCTTCGCCGCCATCAACGCTTGGCAGTCTT GAAGAGCTGCTTGCAGCAAAGGGAAGCTCGCTGATGCCGGGACTGGCTAAATCGCTTCAAGAGGCTTTCCGGCGATGCTG CAATGCCAACGTCCAGCCGGGGCAGGGACGAATCATCTTGATCGTTCGTCTTCCGCGCCTAAGAGACGGTGAAGTTGTGA GCATCGACTCGATGGGCTTCAGAATCGATTGTGACTTGGTCGCGCTAGGGCTAAAAATACAGGCACTTGGCCGGTACGGA GAGAACGATGCAGTCCAGCCAGTCCTTATACTTGGAGAAGGACCAAGGTGGCCAGAGAAGGGTTGGCAAGATATCGAGGT ACTGCATATCGACGTCAGCCGCAGTCTTGATCGAGACGAGGCGAAGCGATGGTCGGGAATTGAAGACGGTGAGTTCCGCG GCGTAATTGCAGGCGTGGGCGCCCTGGGAAGTGCCTTAATCGATATATGGTCCCGCTCCGCATGGGGCCACTGGGACTAC ATTGATCCCGACGTTCTGGCTCAGCACAACGTCGTCCGGCATGTCGGCACCCAAGATCAGGTTGGGCTACCAAAAGTCGA AGTTGCCAAACGCCACGCGCGGCGGACGCTCGGGTTTGCCGACCCAGACGTGAAAGCGTTGCAGAATCGAGCTTCGGACC TTGATACAGAGCCGGTACGCGCGTGCTTGAAACGGGGCGATCTCCTCATCGATGCATCAACAACCATCCAGGTAACTAGG GCTTGGTCTGGAGCTGACCTACCTCGAGGTATGGCGGCCTTTTTGACGCCGTCGGGAGATGGCTGCGTGCTTATTGCTGA GGACAGCGCGCAGGAAATCAGAGGCGCCTCGCTTGAGGCCCAGTACTACAGGGCGATAATCCAGCAAGATTGGGGAGCTG TGCATCTCGAAGCAAAGGGTCGCCCACTTCGAAGTGGGGCGGGCTGTCGCGATGTCTCTGTCGTCCTGGGCTACGACCAG GTGCTGCGAAGTGCATCATTGCTTGCAAGGCAGATCAGGAATAGGTCAATGCTTTCCGGTGCAAGTATCGACGTATGGGA GTCTTCGAGCGACGGCAGCATTCTTCACATTGAGGTAGCGGCCAGACGAACCTTTTCGAAAAAGGTCGGAGACTGGGAGA TTCTCTGGGACGAAGGTCTCTGCGAACAACTCCTGGGGGAACGAGCCAGCTCGCTTCCACTCGAAACCGGAGGAATCCTT CTGGGCGTCGTCGATTTCAAGCTCAATACGATCCATCTCGTGGACGGCCGTTCCGCGCCAAGAGACAGTGTTTCAACTGA GGCGGACTTCCAGTGCGGTAGCTGCGGCGTGCAGGAAGACATCACTGAGGCCCAGCGACGAACAGCCGGTATGGTCCTTT GGATAGGTGCTTGGCACTCGCACCCCAAGGGCGTGAAAGCAGTTCCCAGTATCCAAGATCAGGACCTTCTGTCACATCTC TGCACAAGGCTGGGTGCGCACGGATTACCCGCGGTGATGCTCATCGCGGGCGAGAACGGCATCGACGTATTCTTGCAGAT GAAAGGGAGTTAG
Upstream 100 bases:
>100_bases ATCTGCAGGTCTCATTCGGCGCAGTCCGAGTTAGGAAGGCAGGCGCAGGCTCTTCTACGGTCGCGGCACTCGCTGCCGCG CCGCGCGCAGGCAGCCCTCG
Downstream 100 bases:
>100_bases ATGGTTTCACACGCGGACTATTTCCCAGATCTACTATCGCTCACTCCCATTCGGGCCGTCTGCGTGACCCAGCTTTCACC AAGCACAGACATCTCTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 750; Mature: 749
Protein sequence:
>750_residues MTSDFLDWGDSIPTNEAVPFRDGRMQALLRACNAHADINVVELRRIEDPFIAEIIVADVGDGAVSPGNDAGIHRIERMAL LYRTGARFPFEARPLRKTFPKALHQYATGNEGPPSLCIMEGDWELAEHRFTPEALLETLLAWLEKTADGTIHEADRGLEP VFYSLGQCLMLPPDFAEALSDPSKELALMDAWEWERGVTYRTRIVASASSARAPHRILIMDAAPIAHLPLSSPPSTLGSL EELLAAKGSSLMPGLAKSLQEAFRRCCNANVQPGQGRIILIVRLPRLRDGEVVSIDSMGFRIDCDLVALGLKIQALGRYG ENDAVQPVLILGEGPRWPEKGWQDIEVLHIDVSRSLDRDEAKRWSGIEDGEFRGVIAGVGALGSALIDIWSRSAWGHWDY IDPDVLAQHNVVRHVGTQDQVGLPKVEVAKRHARRTLGFADPDVKALQNRASDLDTEPVRACLKRGDLLIDASTTIQVTR AWSGADLPRGMAAFLTPSGDGCVLIAEDSAQEIRGASLEAQYYRAIIQQDWGAVHLEAKGRPLRSGAGCRDVSVVLGYDQ VLRSASLLARQIRNRSMLSGASIDVWESSSDGSILHIEVAARRTFSKKVGDWEILWDEGLCEQLLGERASSLPLETGGIL LGVVDFKLNTIHLVDGRSAPRDSVSTEADFQCGSCGVQEDITEAQRRTAGMVLWIGAWHSHPKGVKAVPSIQDQDLLSHL CTRLGAHGLPAVMLIAGENGIDVFLQMKGS
Sequences:
>Translated_750_residues MTSDFLDWGDSIPTNEAVPFRDGRMQALLRACNAHADINVVELRRIEDPFIAEIIVADVGDGAVSPGNDAGIHRIERMAL LYRTGARFPFEARPLRKTFPKALHQYATGNEGPPSLCIMEGDWELAEHRFTPEALLETLLAWLEKTADGTIHEADRGLEP VFYSLGQCLMLPPDFAEALSDPSKELALMDAWEWERGVTYRTRIVASASSARAPHRILIMDAAPIAHLPLSSPPSTLGSL EELLAAKGSSLMPGLAKSLQEAFRRCCNANVQPGQGRIILIVRLPRLRDGEVVSIDSMGFRIDCDLVALGLKIQALGRYG ENDAVQPVLILGEGPRWPEKGWQDIEVLHIDVSRSLDRDEAKRWSGIEDGEFRGVIAGVGALGSALIDIWSRSAWGHWDY IDPDVLAQHNVVRHVGTQDQVGLPKVEVAKRHARRTLGFADPDVKALQNRASDLDTEPVRACLKRGDLLIDASTTIQVTR AWSGADLPRGMAAFLTPSGDGCVLIAEDSAQEIRGASLEAQYYRAIIQQDWGAVHLEAKGRPLRSGAGCRDVSVVLGYDQ VLRSASLLARQIRNRSMLSGASIDVWESSSDGSILHIEVAARRTFSKKVGDWEILWDEGLCEQLLGERASSLPLETGGIL LGVVDFKLNTIHLVDGRSAPRDSVSTEADFQCGSCGVQEDITEAQRRTAGMVLWIGAWHSHPKGVKAVPSIQDQDLLSHL CTRLGAHGLPAVMLIAGENGIDVFLQMKGS >Mature_749_residues TSDFLDWGDSIPTNEAVPFRDGRMQALLRACNAHADINVVELRRIEDPFIAEIIVADVGDGAVSPGNDAGIHRIERMALL YRTGARFPFEARPLRKTFPKALHQYATGNEGPPSLCIMEGDWELAEHRFTPEALLETLLAWLEKTADGTIHEADRGLEPV FYSLGQCLMLPPDFAEALSDPSKELALMDAWEWERGVTYRTRIVASASSARAPHRILIMDAAPIAHLPLSSPPSTLGSLE ELLAAKGSSLMPGLAKSLQEAFRRCCNANVQPGQGRIILIVRLPRLRDGEVVSIDSMGFRIDCDLVALGLKIQALGRYGE NDAVQPVLILGEGPRWPEKGWQDIEVLHIDVSRSLDRDEAKRWSGIEDGEFRGVIAGVGALGSALIDIWSRSAWGHWDYI DPDVLAQHNVVRHVGTQDQVGLPKVEVAKRHARRTLGFADPDVKALQNRASDLDTEPVRACLKRGDLLIDASTTIQVTRA WSGADLPRGMAAFLTPSGDGCVLIAEDSAQEIRGASLEAQYYRAIIQQDWGAVHLEAKGRPLRSGAGCRDVSVVLGYDQV LRSASLLARQIRNRSMLSGASIDVWESSSDGSILHIEVAARRTFSKKVGDWEILWDEGLCEQLLGERASSLPLETGGILL GVVDFKLNTIHLVDGRSAPRDSVSTEADFQCGSCGVQEDITEAQRRTAGMVLWIGAWHSHPKGVKAVPSIQDQDLLSHLC TRLGAHGLPAVMLIAGENGIDVFLQMKGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81894; Mature: 81763
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDFLDWGDSIPTNEAVPFRDGRMQALLRACNAHADINVVELRRIEDPFIAEIIVADVG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECC DGAVSPGNDAGIHRIERMALLYRTGARFPFEARPLRKTFPKALHQYATGNEGPPSLCIME CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC GDWELAEHRFTPEALLETLLAWLEKTADGTIHEADRGLEPVFYSLGQCLMLPPDFAEALS CCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCCCEEECCCHHHHHHC DPSKELALMDAWEWERGVTYRTRIVASASSARAPHRILIMDAAPIAHLPLSSPPSTLGSL CCCHHEEEEECHHHCCCCEEEEEEEEECCCCCCCEEEEEEECCCCEECCCCCCCHHHHHH EELLAAKGSSLMPGLAKSLQEAFRRCCNANVQPGQGRIILIVRLPRLRDGEVVSIDSMGF HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCE RIDCDLVALGLKIQALGRYGENDAVQPVLILGEGPRWPEKGWQDIEVLHIDVSRSLDRDE EEEEEEEEECEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHH AKRWSGIEDGEFRGVIAGVGALGSALIDIWSRSAWGHWDYIDPDVLAQHNVVRHVGTQDQ HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC VGLPKVEVAKRHARRTLGFADPDVKALQNRASDLDTEPVRACLKRGDLLIDASTTIQVTR CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCEEEEEE AWSGADLPRGMAAFLTPSGDGCVLIAEDSAQEIRGASLEAQYYRAIIQQDWGAVHLEAKG CCCCCCCCCCCEEEECCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHCCCCEEEEEECC RPLRSGAGCRDVSVVLGYDQVLRSASLLARQIRNRSMLSGASIDVWESSSDGSILHIEVA CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECCCCCCEEEEEEH ARRTFSKKVGDWEILWDEGLCEQLLGERASSLPLETGGILLGVVDFKLNTIHLVDGRSAP HHHHHHHCCCCEEEEECCHHHHHHHHCHHHCCCCCCCCEEEEEEEEEEEEEEEECCCCCC RDSVSTEADFQCGSCGVQEDITEAQRRTAGMVLWIGAWHSHPKGVKAVPSIQDQDLLSHL CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHH CTRLGAHGLPAVMLIAGENGIDVFLQMKGS HHHHCCCCCCEEEEEECCCCCEEEEEECCC >Mature Secondary Structure TSDFLDWGDSIPTNEAVPFRDGRMQALLRACNAHADINVVELRRIEDPFIAEIIVADVG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEEECC DGAVSPGNDAGIHRIERMALLYRTGARFPFEARPLRKTFPKALHQYATGNEGPPSLCIME CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC GDWELAEHRFTPEALLETLLAWLEKTADGTIHEADRGLEPVFYSLGQCLMLPPDFAEALS CCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCCCEEECCCHHHHHHC DPSKELALMDAWEWERGVTYRTRIVASASSARAPHRILIMDAAPIAHLPLSSPPSTLGSL CCCHHEEEEECHHHCCCCEEEEEEEEECCCCCCCEEEEEEECCCCEECCCCCCCHHHHHH EELLAAKGSSLMPGLAKSLQEAFRRCCNANVQPGQGRIILIVRLPRLRDGEVVSIDSMGF HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCE RIDCDLVALGLKIQALGRYGENDAVQPVLILGEGPRWPEKGWQDIEVLHIDVSRSLDRDE EEEEEEEEECEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHH AKRWSGIEDGEFRGVIAGVGALGSALIDIWSRSAWGHWDYIDPDVLAQHNVVRHVGTQDQ HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC VGLPKVEVAKRHARRTLGFADPDVKALQNRASDLDTEPVRACLKRGDLLIDASTTIQVTR CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCEEEEEE AWSGADLPRGMAAFLTPSGDGCVLIAEDSAQEIRGASLEAQYYRAIIQQDWGAVHLEAKG CCCCCCCCCCCEEEECCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHCCCCEEEEEECC RPLRSGAGCRDVSVVLGYDQVLRSASLLARQIRNRSMLSGASIDVWESSSDGSILHIEVA CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECCCCCCEEEEEEH ARRTFSKKVGDWEILWDEGLCEQLLGERASSLPLETGGILLGVVDFKLNTIHLVDGRSAP HHHHHHHCCCCEEEEECCHHHHHHHHCHHHCCCCCCCCEEEEEEEEEEEEEEEECCCCCC RDSVSTEADFQCGSCGVQEDITEAQRRTAGMVLWIGAWHSHPKGVKAVPSIQDQDLLSHL CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHH CTRLGAHGLPAVMLIAGENGIDVFLQMKGS HHHHCCCCCCEEEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA