| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244670
Identifier: 21244670
GI number: 21244670
Start: 4645856
End: 4646824
Strand: Direct
Name: 21244670
Synonym: XAC3951
Alternate gene names: NA
Gene position: 4645856-4646824 (Clockwise)
Preceding gene: 21244668
Following gene: 21244671
Centisome position: 89.77
GC content: 57.59
Gene sequence:
>969_bases ATGTTGAGTCACCCCGACAAGGACCACTGTCTCGGCCTGGCCCGTCATTTCTACCTGGGTCCGATCGAGGACTATCCTGA TGACAAGAAAGCTGACAAGGACAAGCGGATCGTCATACGGGAAATCTGGTCGTCTCCGTTGGTCTTCCGCCGGCGTTCAA AGGAGCATGTTCTCTGCGACGACGCCTTGGCCTTTAATCGCGAGGCAAAGCGGCGGGTAAAGCAGTACCGCCATGGTCTA GGGAACAAGGACGGTGAGCGCGTACTTCTGATGGGTGAGGACGTTGACGGCAAGACGGACGATCTCGCCCCGATCGTCAT CAAGCCTGGTAGTACCTTCAGCCGCATTAATGGAGCTAATAGCTCCTACTTTGAGGCAACGCTGCTCGCGCCCATCCTCT GCGAGGACCCGGATATTGTTGAGGAACTGAAGAAGAACAATTCCAGCATCGTCATCAACTTCGCCTTGGAATCCGTCGAG GCCGGACGCCCCCGCTGCAAGTTCCTGTCTGGCGGTGATGCGGAGGTTTACGTATGGGAGCTTCTCTGGGCTGAGTATGG GAAGAGCGGTGAGCTGCAGTACGACCTTCTCCAGGCACCGCACCATTGCTCGTGGCATTCACTTTCATGGGATAGCTGGT CAGAAAAAGGCGAGAAGGCCCAAGTGTCAGCTGAAGCGCGAGCTGCCCTAGGCCAGGCGAAGACAGGTGCCGTGATTGTG GCTAGCTCGAAGCGGATACTGGATGACAAAAATGATCCGCCATGCATTCGCGCTAAGAGGGAATACGAGAGCATCCTGGC TGCTGTAGGTGGAAAATTCATGTGCACCGGAGAGTATCCGCAATACTGGGAGCAGGCTCCGCTGGATCTGCAGGTCTCAT TCGGCGCAGTCCGAGTTAGGAAGGCAGGCGCAGGCTCTTCTACGGTCGCGGCACTCGCTGCCGCGCCGCGCGCAGGCAGC CCTCGGTGA
Upstream 100 bases:
>100_bases GGCGGACGATGCTGACGACACTTCGGTACGTGATGTGGCTTCGGATCTGCGGGTTAGGCTGCAGCGGGATGGACTTGGCC GGCCCTATGTCGACGTCTTC
Downstream 100 bases:
>100_bases CTTCTGATTTTCTCGACTGGGGGGACAGCATCCCCACAAATGAGGCTGTTCCATTCCGTGATGGCCGCATGCAAGCCCTC CTCAGGGCCTGCAATGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MLSHPDKDHCLGLARHFYLGPIEDYPDDKKADKDKRIVIREIWSSPLVFRRRSKEHVLCDDALAFNREAKRRVKQYRHGL GNKDGERVLLMGEDVDGKTDDLAPIVIKPGSTFSRINGANSSYFEATLLAPILCEDPDIVEELKKNNSSIVINFALESVE AGRPRCKFLSGGDAEVYVWELLWAEYGKSGELQYDLLQAPHHCSWHSLSWDSWSEKGEKAQVSAEARAALGQAKTGAVIV ASSKRILDDKNDPPCIRAKREYESILAAVGGKFMCTGEYPQYWEQAPLDLQVSFGAVRVRKAGAGSSTVAALAAAPRAGS PR
Sequences:
>Translated_322_residues MLSHPDKDHCLGLARHFYLGPIEDYPDDKKADKDKRIVIREIWSSPLVFRRRSKEHVLCDDALAFNREAKRRVKQYRHGL GNKDGERVLLMGEDVDGKTDDLAPIVIKPGSTFSRINGANSSYFEATLLAPILCEDPDIVEELKKNNSSIVINFALESVE AGRPRCKFLSGGDAEVYVWELLWAEYGKSGELQYDLLQAPHHCSWHSLSWDSWSEKGEKAQVSAEARAALGQAKTGAVIV ASSKRILDDKNDPPCIRAKREYESILAAVGGKFMCTGEYPQYWEQAPLDLQVSFGAVRVRKAGAGSSTVAALAAAPRAGS PR >Mature_322_residues MLSHPDKDHCLGLARHFYLGPIEDYPDDKKADKDKRIVIREIWSSPLVFRRRSKEHVLCDDALAFNREAKRRVKQYRHGL GNKDGERVLLMGEDVDGKTDDLAPIVIKPGSTFSRINGANSSYFEATLLAPILCEDPDIVEELKKNNSSIVINFALESVE AGRPRCKFLSGGDAEVYVWELLWAEYGKSGELQYDLLQAPHHCSWHSLSWDSWSEKGEKAQVSAEARAALGQAKTGAVIV ASSKRILDDKNDPPCIRAKREYESILAAVGGKFMCTGEYPQYWEQAPLDLQVSFGAVRVRKAGAGSSTVAALAAAPRAGS PR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35673; Mature: 35673
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSHPDKDHCLGLARHFYLGPIEDYPDDKKADKDKRIVIREIWSSPLVFRRRSKEHVLCD CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEHHCCCCCEEEC DALAFNREAKRRVKQYRHGLGNKDGERVLLMGEDVDGKTDDLAPIVIKPGSTFSRINGAN HHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHCCCCC SSYFEATLLAPILCEDPDIVEELKKNNSSIVINFALESVEAGRPRCKFLSGGDAEVYVWE CCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEEEHHHHCCCCCEEEECCCCCEEEEHE LLWAEYGKSGELQYDLLQAPHHCSWHSLSWDSWSEKGEKAQVSAEARAALGQAKTGAVIV EHHHHHCCCCCEEEHHHCCCCCCCCCCCCCCCHHCCCCCEEHHHHHHHHHCCCCCCEEEE ASSKRILDDKNDPPCIRAKREYESILAAVGGKFMCTGEYPQYWEQAPLDLQVSFGAVRVR ECCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCEEEEECCEEEEE KAGAGSSTVAALAAAPRAGSPR ECCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MLSHPDKDHCLGLARHFYLGPIEDYPDDKKADKDKRIVIREIWSSPLVFRRRSKEHVLCD CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEHHCCCCCEEEC DALAFNREAKRRVKQYRHGLGNKDGERVLLMGEDVDGKTDDLAPIVIKPGSTFSRINGAN HHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHCCCCC SSYFEATLLAPILCEDPDIVEELKKNNSSIVINFALESVEAGRPRCKFLSGGDAEVYVWE CCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEEEHHHHCCCCCEEEECCCCCEEEEHE LLWAEYGKSGELQYDLLQAPHHCSWHSLSWDSWSEKGEKAQVSAEARAALGQAKTGAVIV EHHHHHCCCCCEEEHHHCCCCCCCCCCCCCCCHHCCCCCEEHHHHHHHHHCCCCCCEEEE ASSKRILDDKNDPPCIRAKREYESILAAVGGKFMCTGEYPQYWEQAPLDLQVSFGAVRVR ECCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCCCEEEEECCEEEEE KAGAGSSTVAALAAAPRAGSPR ECCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA