| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244667
Identifier: 21244667
GI number: 21244667
Start: 4642098
End: 4643435
Strand: Reverse
Name: 21244667
Synonym: XAC3948
Alternate gene names: NA
Gene position: 4643435-4642098 (Counterclockwise)
Preceding gene: 21244669
Following gene: 21244666
Centisome position: 89.72
GC content: 55.16
Gene sequence:
>1338_bases ATGGAACGAGTGATCGAGATCTACCACGACGGTGTCTTGCTTCGTCTGGTCGACGAAGCTGAAGTCGGTGTAAGAGACAA CACATATACGGTTGTTGTGGGGGAGAACGGCGTTGGGAAAAGCCGCCTGCTGTCGGACATTGCTCGGGTACGGATCAGCG ACTACAACCTAATGGCTGCTTGGCGCATTGACGCTCCGGTCTTTCCTGTGGTCATTGCAGCGTCAACAAGTCCGTTCGAC AAATTTCCTGCCCCGCCAAGGCGACTTGCGAAAGCACAGAAGAACTACCGCTATGTTGGAATGCGCGGTGAGGGTATGTA CGGCGCTTCTTCCGCTGTATCGTTGCTGTCTTCCGCGGCTCGCGGGTTGCTATCGAAACTGTCCGAAACTCCACCTAGCT TGAACCTACTGGAGGTTCTGGATTCATTGAAGTTCTCTCCAGTGTTCAACTTTGTCTTAAAGCCGCAGTTTGAACGCTCG CGCGAGAATGAGACCTCAAGTCGTTACAGGGGTGACAGATCCTCCTTCACGTCTGGCGCTTACAGGTACAGCTTCGATAC CCGCGTCGCATCCATCCTTGAGGCGACCGACAGCTTGCAAGCAGTACTGAGGGACCTCGACATCGCCTCTTCCCTTATGG ATGCGCCTGGCGCGTTGCGCCTCACAGTTGATTTCCGAAGTAGCGTCGCGACTCTTGGCGGCACGGTGATAGAGTCCAGC CATCTTGGCGCAATTCTGAGGTTGTTCGAAGAGAACTTGCTTCGGCTGATGGACGTCGAGGTGGAGAAGTATGGACGACA GCCTTTCAGCCTTAAGCGAGCAAGCTCTGGTGAGCAGTGCTTGCTTGTGTTGATGCTCGGCGTCGCAGGGCACATTCAAG ACCACTCTCTGATACTGATAGACGAGCCCGAAATCAGTCTCCACCCGGAGTGGCAGGAGCGCTTCATGGCGCTCCTGCAG TCCGCATTTTCGCATTACAGCGGTTGCCAGTTTGTGATTGCCACGCACTCGCCTCAGATCATCTCTAGGCTTAGTGGCCC CGGATCCTTCATCTGTCACCTACGCAAAAGGAAGCTCTATCCTGCGTCGCAGTTTCAACGCCGCTCCGCAGACTTCCAAC TGGCTGAGCTCTTTGACGCACCCGGCATGATGAACGAGTACATCTCCAGGGTATGCTTCAATCTCATCGCCCAAGTGCGC GTCGGCCGCCCATTTACGCCCCAAATGAAGAGTGAGATCGACTGGCTGTTCGATGTGCGCTCGAAGCTTGACCCTAGCGA CAAGCTAATAGCGTTGATCGACTCACTCTCGGCGCTTCTCAAGGAGGGGCGGTCTTGA
Upstream 100 bases:
>100_bases GATCCCATCTCCGCAATGTCGCGCCCGGAGTGGAGGGACCTCGATCTTGGATAGCCATCCAACATCTGCCAACATTCCCC CGATAGACAGGGAGGGTCCC
Downstream 100 bases:
>100_bases TTGACGAACCTGTTGTCTTTAGCGCGGATGCGCTCAATAGAATTGCCACCGCGCGTGCTCATCCCGCATACGATCACACG ATGTGGTCCGACGCAACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MERVIEIYHDGVLLRLVDEAEVGVRDNTYTVVVGENGVGKSRLLSDIARVRISDYNLMAAWRIDAPVFPVVIAASTSPFD KFPAPPRRLAKAQKNYRYVGMRGEGMYGASSAVSLLSSAARGLLSKLSETPPSLNLLEVLDSLKFSPVFNFVLKPQFERS RENETSSRYRGDRSSFTSGAYRYSFDTRVASILEATDSLQAVLRDLDIASSLMDAPGALRLTVDFRSSVATLGGTVIESS HLGAILRLFEENLLRLMDVEVEKYGRQPFSLKRASSGEQCLLVLMLGVAGHIQDHSLILIDEPEISLHPEWQERFMALLQ SAFSHYSGCQFVIATHSPQIISRLSGPGSFICHLRKRKLYPASQFQRRSADFQLAELFDAPGMMNEYISRVCFNLIAQVR VGRPFTPQMKSEIDWLFDVRSKLDPSDKLIALIDSLSALLKEGRS
Sequences:
>Translated_445_residues MERVIEIYHDGVLLRLVDEAEVGVRDNTYTVVVGENGVGKSRLLSDIARVRISDYNLMAAWRIDAPVFPVVIAASTSPFD KFPAPPRRLAKAQKNYRYVGMRGEGMYGASSAVSLLSSAARGLLSKLSETPPSLNLLEVLDSLKFSPVFNFVLKPQFERS RENETSSRYRGDRSSFTSGAYRYSFDTRVASILEATDSLQAVLRDLDIASSLMDAPGALRLTVDFRSSVATLGGTVIESS HLGAILRLFEENLLRLMDVEVEKYGRQPFSLKRASSGEQCLLVLMLGVAGHIQDHSLILIDEPEISLHPEWQERFMALLQ SAFSHYSGCQFVIATHSPQIISRLSGPGSFICHLRKRKLYPASQFQRRSADFQLAELFDAPGMMNEYISRVCFNLIAQVR VGRPFTPQMKSEIDWLFDVRSKLDPSDKLIALIDSLSALLKEGRS >Mature_445_residues MERVIEIYHDGVLLRLVDEAEVGVRDNTYTVVVGENGVGKSRLLSDIARVRISDYNLMAAWRIDAPVFPVVIAASTSPFD KFPAPPRRLAKAQKNYRYVGMRGEGMYGASSAVSLLSSAARGLLSKLSETPPSLNLLEVLDSLKFSPVFNFVLKPQFERS RENETSSRYRGDRSSFTSGAYRYSFDTRVASILEATDSLQAVLRDLDIASSLMDAPGALRLTVDFRSSVATLGGTVIESS HLGAILRLFEENLLRLMDVEVEKYGRQPFSLKRASSGEQCLLVLMLGVAGHIQDHSLILIDEPEISLHPEWQERFMALLQ SAFSHYSGCQFVIATHSPQIISRLSGPGSFICHLRKRKLYPASQFQRRSADFQLAELFDAPGMMNEYISRVCFNLIAQVR VGRPFTPQMKSEIDWLFDVRSKLDPSDKLIALIDSLSALLKEGRS
Specific function: Unknown
COG id: COG3950
COG function: function code R; Predicted ATP-binding protein involved in virulence
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49653; Mature: 49653
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVIEIYHDGVLLRLVDEAEVGVRDNTYTVVVGENGVGKSRLLSDIARVRISDYNLMAA CCHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEECCCEEEEE WRIDAPVFPVVIAASTSPFDKFPAPPRRLAKAQKNYRYVGMRGEGMYGASSAVSLLSSAA EECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH RGLLSKLSETPPSLNLLEVLDSLKFSPVFNFVLKPQFERSRENETSSRYRGDRSSFTSGA HHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCHHHHHCCCCCCCCCCC YRYSFDTRVASILEATDSLQAVLRDLDIASSLMDAPGALRLTVDFRSSVATLGGTVIESS EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCHHHCCH HLGAILRLFEENLLRLMDVEVEKYGRQPFSLKRASSGEQCLLVLMLGVAGHIQDHSLILI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE DEPEISLHPEWQERFMALLQSAFSHYSGCQFVIATHSPQIISRLSGPGSFICHLRKRKLY ECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHCCC PASQFQRRSADFQLAELFDAPGMMNEYISRVCFNLIAQVRVGRPFTPQMKSEIDWLFDVR CHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SKLDPSDKLIALIDSLSALLKEGRS HHCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MERVIEIYHDGVLLRLVDEAEVGVRDNTYTVVVGENGVGKSRLLSDIARVRISDYNLMAA CCHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEECCCEEEEE WRIDAPVFPVVIAASTSPFDKFPAPPRRLAKAQKNYRYVGMRGEGMYGASSAVSLLSSAA EECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH RGLLSKLSETPPSLNLLEVLDSLKFSPVFNFVLKPQFERSRENETSSRYRGDRSSFTSGA HHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCHHHHHCCCCCCCCCCC YRYSFDTRVASILEATDSLQAVLRDLDIASSLMDAPGALRLTVDFRSSVATLGGTVIESS EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCHHHCCH HLGAILRLFEENLLRLMDVEVEKYGRQPFSLKRASSGEQCLLVLMLGVAGHIQDHSLILI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE DEPEISLHPEWQERFMALLQSAFSHYSGCQFVIATHSPQIISRLSGPGSFICHLRKRKLY ECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHCCC PASQFQRRSADFQLAELFDAPGMMNEYISRVCFNLIAQVRVGRPFTPQMKSEIDWLFDVR CHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SKLDPSDKLIALIDSLSALLKEGRS HHCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA