| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244613
Identifier: 21244613
GI number: 21244613
Start: 4571692
End: 4572117
Strand: Reverse
Name: 21244613
Synonym: XAC3889
Alternate gene names: NA
Gene position: 4572117-4571692 (Counterclockwise)
Preceding gene: 21244616
Following gene: 21244612
Centisome position: 88.34
GC content: 62.91
Gene sequence:
>426_bases TTGCGGCCTCCGCGGGCACTGTCGGCCAAGCAATTCGTGCAGCTGTTCGCAGTGTTAGCGGGAACGATGTGGTTATTTGC AGGCCTGGGGTGGTGGACCGGCAATGCGTTCGCGCCGGTTTTTGCCCTGGTACACAGTGGTGTGGTGGCGCTGGCGCTAC GGCAGTTGTGGCGAAGTGGCGAGCGCGAAGAAGCGATCCGGGTGGGGGAGGCCGTTGTCGAGGTGTTTCCGTCCGGGCAT GCGCCACCAGCGTTTCAGGCACATCCGCACTGGGTGCGGCTTTGCATAGAACGCGATGACAGGGTGTTGCTGGTCAGCAG CGGCAAGCAGATCGAGATCGGAAGTTTTCTCGGGCCGGCCGAACGTGTGGAACTGGCAACGACGCTCAAACGCTTGCTCG CGGCCGCCAATGGCCGTCACCGATGA
Upstream 100 bases:
>100_bases GGCGCGGGTCTACCATCGGGCTATTCCCGCAGTGCGCTGCGTGCTGTTTATGATCGAAGTGCTGCCGTTGATGTCCGGAG GGGTTGGGACGCAGCTGCGG
Downstream 100 bases:
>100_bases CGTAAGGGTCTAGGCAATGACGCAACGCAGCAGCTGGAAGTCGATCAACACCTGCACACAAGTAGGCCTGGCGATGGCGG CGCTGTTGAGCGCGCCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRPPRALSAKQFVQLFAVLAGTMWLFAGLGWWTGNAFAPVFALVHSGVVALALRQLWRSGEREEAIRVGEAVVEVFPSGH APPAFQAHPHWVRLCIERDDRVLLVSSGKQIEIGSFLGPAERVELATTLKRLLAAANGRHR
Sequences:
>Translated_141_residues MRPPRALSAKQFVQLFAVLAGTMWLFAGLGWWTGNAFAPVFALVHSGVVALALRQLWRSGEREEAIRVGEAVVEVFPSGH APPAFQAHPHWVRLCIERDDRVLLVSSGKQIEIGSFLGPAERVELATTLKRLLAAANGRHR >Mature_141_residues MRPPRALSAKQFVQLFAVLAGTMWLFAGLGWWTGNAFAPVFALVHSGVVALALRQLWRSGEREEAIRVGEAVVEVFPSGH APPAFQAHPHWVRLCIERDDRVLLVSSGKQIEIGSFLGPAERVELATTLKRLLAAANGRHR
Specific function: Unknown
COG id: COG5488
COG function: function code S; Integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15515; Mature: 15515
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPPRALSAKQFVQLFAVLAGTMWLFAGLGWWTGNAFAPVFALVHSGVVALALRQLWRSG CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCC EREEAIRVGEAVVEVFPSGHAPPAFQAHPHWVRLCIERDDRVLLVSSGKQIEIGSFLGPA CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCCCEEEEECCCEEECCCCCCHH ERVELATTLKRLLAAANGRHR HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRPPRALSAKQFVQLFAVLAGTMWLFAGLGWWTGNAFAPVFALVHSGVVALALRQLWRSG CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCC EREEAIRVGEAVVEVFPSGHAPPAFQAHPHWVRLCIERDDRVLLVSSGKQIEIGSFLGPA CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEECCCCCEEEEECCCEEECCCCCCHH ERVELATTLKRLLAAANGRHR HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA