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The map label for this gene is rbn [C]

Identifier: 21244599

GI number: 21244599

Start: 4557746

End: 4558645

Strand: Direct

Name: rbn [C]

Synonym: XAC3875

Alternate gene names: 21244599

Gene position: 4557746-4558645 (Clockwise)

Preceding gene: 21244598

Following gene: 21244600

Centisome position: 88.06

GC content: 65.11

Gene sequence:

>900_bases
ATGGCGCTGCTGAACCGCTTCATCGAGATCGACGTGATGACGCAGGCGGCGTCGTTGTCGTTCTACGCGCTGCTGTCGCT
GGCCCCGTTGCTGGTGCTGCTGTTGTGGCTGACTGCCTCGCTCTATCCGCCAGCGCAGGAAGCATTGGTGCAGCAAATCG
GGCAATTGGCCGGCGGCAGCGCGGCCGAAGTCGCGCAGACCGTCATTCGCAATGCCACCGATCAACCTGGCGTTGGCTCG
CTGGCCGGGGTATGGAGCACGCTACTGCTGTTCATCGGCGCCACGGCGGTGTTTGCGCAGTTGCAGAACGCCTTGAACCT
GATCTTCCGCACCGACAAGCAACGCCTGGACGGCTTGATGGCTTGGCTGCAGAAGCGGGTGTTCTCGTTCGGGGTGATCC
TGGCGTTGGGCTTCTTGCTGATCGTGTCGATGATTGCCACCACCGCACTGCAGGTGGTCTTTGCGCGCCTGCCCTCGGTC
CTGCCGGCAGTCGGCTACGTGACCACGCTGGCCCTGTACTCGCTGGCGTTCGCGTTCCTGTATCGCTACCTGCCCGATCG
CACCGTCGACTGGCGCCAGGCGTTCCTGGGCGGCGTCATCACCGCGGTGTTGTTCGCGCTGGGCCGCTACGCCATCGGCG
TGTACATCGCCACCGCAGCGCCGGGCAGCGCCTACGGTTCGATGGGGACATTGGTCATCCTGCTGGTGTGGATGTACTAC
GCCTCGGTGGTGTTCTTCGTCGGCGCCTTGATCACCGCGGTGATCGACGAGCGGGTGCGCTCGCATCGCAAGCTGCGCGA
GGCGGGCGTGGATCCGGAACATCCGCCGGTGATCGTGCCGCCTGCCGATGCAGCGCCTGCATCTTCAGCATCGGAGTCGC
ACGCGCTGCCACGCGGCTGA

Upstream 100 bases:

>100_bases
TCCGCGCCAACGGTATGCGCCAAGGATCCTCCCACCGGTGACGACGCTTTCCTCCGCCTATCTGCACAAGCATCTTAGCC
GTCTGCAGCGGAGCGTGCCG

Downstream 100 bases:

>100_bases
GGACTCTGCTGCAGTGCCGGCCTCCCCGGCCTCGTCGGCGGGGGCGACGAAGTACTGGCAGGCCGCTGGGATATCCTAGC
GGGATGGCCCGCATCCCCGA

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASLYPPAQEALVQQIGQLAGGSAAEVAQTVIRNATDQPGVGS
LAGVWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV
LPAVGYVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPGSAYGSMGTLVILLVWMYY
ASVVFFVGALITAVIDERVRSHRKLREAGVDPEHPPVIVPPADAAPASSASESHALPRG

Sequences:

>Translated_299_residues
MALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASLYPPAQEALVQQIGQLAGGSAAEVAQTVIRNATDQPGVGS
LAGVWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV
LPAVGYVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPGSAYGSMGTLVILLVWMYY
ASVVFFVGALITAVIDERVRSHRKLREAGVDPEHPPVIVPPADAAPASSASESHALPRG
>Mature_298_residues
ALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASLYPPAQEALVQQIGQLAGGSAAEVAQTVIRNATDQPGVGSL
AGVWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVL
PAVGYVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPGSAYGSMGTLVILLVWMYYA
SVVFFVGALITAVIDERVRSHRKLREAGVDPEHPPVIVPPADAAPASSASESHALPRG

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=287, Percent_Identity=27.5261324041812, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 32055; Mature: 31924

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASLYPPAQEALVQQIGQLAGGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
AAEVAQTVIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGLM
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVGYVTTLALYSLAFAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPGSAYGSMGTLVILLVWMYY
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
ASVVFFVGALITAVIDERVRSHRKLREAGVDPEHPPVIVPPADAAPASSASESHALPRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASLYPPAQEALVQQIGQLAGGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
AAEVAQTVIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGLM
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVGYVTTLALYSLAFAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPGSAYGSMGTLVILLVWMYY
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
ASVVFFVGALITAVIDERVRSHRKLREAGVDPEHPPVIVPPADAAPASSASESHALPRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA