| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244568
Identifier: 21244568
GI number: 21244568
Start: 4523825
End: 4524382
Strand: Reverse
Name: 21244568
Synonym: XAC3844
Alternate gene names: NA
Gene position: 4524382-4523825 (Counterclockwise)
Preceding gene: 21244569
Following gene: 21244559
Centisome position: 87.42
GC content: 66.49
Gene sequence:
>558_bases ATGCGTACTACCTCTGTTTCGAGCAGCTTGGCCCTGGCGTTGGCGGGCGTTCTCGCCGTGTCTGGCTGCAGCAAGAAGGC CGACGACGACAGCGTTTCCAAAGACCCCACTTCCGGTGCCGCGACCGAAGCGATGCCCGGCCCGGCCGCCACCCCGCCGG CGAGCGATCAGGCAGCCCAGGGCAGCGCAACCGGTGCGGCCAGCACCGATGGCGGTGCTGCCACGGGTAGCGCAGTGACG GTGTCCAGTGTGGCCGTCGGCACCCAGGCCGCAGCCGACAAGACGGTGACCCCGGCGACCAGTGTCGGCAGCAAAGACAC CATCATCGTCTCGGTCAAGACGGACGGCAGCGCGAGCAACGTGGCCGTGTCGGCAAAGCTGACCTACCAGGATGGCCAGG TGGCTGGCGAACAGAACGCGACGTTGAACACCACCGGTGCCGAAACCACCAACCTGAGCTTCAGCAAGCCCGATGGCTGG CCGGCCGGCACCTACACCGCGCAGGTCATGGTGGACGGCAAGCCTGCAGGCACGCCTCAGACCATCATCGTCAAATAA
Upstream 100 bases:
>100_bases AGGTCGGCTTGCAGTCGCTGGCGGTAACGCCAGTCAACAAACCCAGAAACCAACTCGAACACTGCCACTGCAGGCGTTCT GGCTACCGGAGAATCGATTT
Downstream 100 bases:
>100_bases TGGTTCTCAAGCGTTGATGGACGGAGCCCAATTTTTGATCTGCGTGCGTATTGATCTTTGCCATACGCAGGCCTCAAGCA TGTCCAACCTGCACCTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MRTTSVSSSLALALAGVLAVSGCSKKADDDSVSKDPTSGAATEAMPGPAATPPASDQAAQGSATGAASTDGGAATGSAVT VSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASNVAVSAKLTYQDGQVAGEQNATLNTTGAETTNLSFSKPDGW PAGTYTAQVMVDGKPAGTPQTIIVK
Sequences:
>Translated_185_residues MRTTSVSSSLALALAGVLAVSGCSKKADDDSVSKDPTSGAATEAMPGPAATPPASDQAAQGSATGAASTDGGAATGSAVT VSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASNVAVSAKLTYQDGQVAGEQNATLNTTGAETTNLSFSKPDGW PAGTYTAQVMVDGKPAGTPQTIIVK >Mature_185_residues MRTTSVSSSLALALAGVLAVSGCSKKADDDSVSKDPTSGAATEAMPGPAATPPASDQAAQGSATGAASTDGGAATGSAVT VSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASNVAVSAKLTYQDGQVAGEQNATLNTTGAETTNLSFSKPDGW PAGTYTAQVMVDGKPAGTPQTIIVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17823; Mature: 17823
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTSVSSSLALALAGVLAVSGCSKKADDDSVSKDPTSGAATEAMPGPAATPPASDQAAQ CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSATGAASTDGGAATGSAVTVSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASN CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC VAVSAKLTYQDGQVAGEQNATLNTTGAETTNLSFSKPDGWPAGTYTAQVMVDGKPAGTPQ EEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC TIIVK EEEEC >Mature Secondary Structure MRTTSVSSSLALALAGVLAVSGCSKKADDDSVSKDPTSGAATEAMPGPAATPPASDQAAQ CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSATGAASTDGGAATGSAVTVSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASN CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC VAVSAKLTYQDGQVAGEQNATLNTTGAETTNLSFSKPDGWPAGTYTAQVMVDGKPAGTPQ EEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC TIIVK EEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA