Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21244568

Identifier: 21244568

GI number: 21244568

Start: 4523825

End: 4524382

Strand: Reverse

Name: 21244568

Synonym: XAC3844

Alternate gene names: NA

Gene position: 4524382-4523825 (Counterclockwise)

Preceding gene: 21244569

Following gene: 21244559

Centisome position: 87.42

GC content: 66.49

Gene sequence:

>558_bases
ATGCGTACTACCTCTGTTTCGAGCAGCTTGGCCCTGGCGTTGGCGGGCGTTCTCGCCGTGTCTGGCTGCAGCAAGAAGGC
CGACGACGACAGCGTTTCCAAAGACCCCACTTCCGGTGCCGCGACCGAAGCGATGCCCGGCCCGGCCGCCACCCCGCCGG
CGAGCGATCAGGCAGCCCAGGGCAGCGCAACCGGTGCGGCCAGCACCGATGGCGGTGCTGCCACGGGTAGCGCAGTGACG
GTGTCCAGTGTGGCCGTCGGCACCCAGGCCGCAGCCGACAAGACGGTGACCCCGGCGACCAGTGTCGGCAGCAAAGACAC
CATCATCGTCTCGGTCAAGACGGACGGCAGCGCGAGCAACGTGGCCGTGTCGGCAAAGCTGACCTACCAGGATGGCCAGG
TGGCTGGCGAACAGAACGCGACGTTGAACACCACCGGTGCCGAAACCACCAACCTGAGCTTCAGCAAGCCCGATGGCTGG
CCGGCCGGCACCTACACCGCGCAGGTCATGGTGGACGGCAAGCCTGCAGGCACGCCTCAGACCATCATCGTCAAATAA

Upstream 100 bases:

>100_bases
AGGTCGGCTTGCAGTCGCTGGCGGTAACGCCAGTCAACAAACCCAGAAACCAACTCGAACACTGCCACTGCAGGCGTTCT
GGCTACCGGAGAATCGATTT

Downstream 100 bases:

>100_bases
TGGTTCTCAAGCGTTGATGGACGGAGCCCAATTTTTGATCTGCGTGCGTATTGATCTTTGCCATACGCAGGCCTCAAGCA
TGTCCAACCTGCACCTCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRTTSVSSSLALALAGVLAVSGCSKKADDDSVSKDPTSGAATEAMPGPAATPPASDQAAQGSATGAASTDGGAATGSAVT
VSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASNVAVSAKLTYQDGQVAGEQNATLNTTGAETTNLSFSKPDGW
PAGTYTAQVMVDGKPAGTPQTIIVK

Sequences:

>Translated_185_residues
MRTTSVSSSLALALAGVLAVSGCSKKADDDSVSKDPTSGAATEAMPGPAATPPASDQAAQGSATGAASTDGGAATGSAVT
VSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASNVAVSAKLTYQDGQVAGEQNATLNTTGAETTNLSFSKPDGW
PAGTYTAQVMVDGKPAGTPQTIIVK
>Mature_185_residues
MRTTSVSSSLALALAGVLAVSGCSKKADDDSVSKDPTSGAATEAMPGPAATPPASDQAAQGSATGAASTDGGAATGSAVT
VSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASNVAVSAKLTYQDGQVAGEQNATLNTTGAETTNLSFSKPDGW
PAGTYTAQVMVDGKPAGTPQTIIVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17823; Mature: 17823

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTSVSSSLALALAGVLAVSGCSKKADDDSVSKDPTSGAATEAMPGPAATPPASDQAAQ
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSATGAASTDGGAATGSAVTVSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASN
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
VAVSAKLTYQDGQVAGEQNATLNTTGAETTNLSFSKPDGWPAGTYTAQVMVDGKPAGTPQ
EEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
TIIVK
EEEEC
>Mature Secondary Structure
MRTTSVSSSLALALAGVLAVSGCSKKADDDSVSKDPTSGAATEAMPGPAATPPASDQAAQ
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSATGAASTDGGAATGSAVTVSSVAVGTQAAADKTVTPATSVGSKDTIIVSVKTDGSASN
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
VAVSAKLTYQDGQVAGEQNATLNTTGAETTNLSFSKPDGWPAGTYTAQVMVDGKPAGTPQ
EEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
TIIVK
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA