| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244485
Identifier: 21244485
GI number: 21244485
Start: 4437103
End: 4438956
Strand: Direct
Name: 21244485
Synonym: XAC3760
Alternate gene names: NA
Gene position: 4437103-4438956 (Clockwise)
Preceding gene: 21244480
Following gene: 21244487
Centisome position: 85.73
GC content: 66.29
Gene sequence:
>1854_bases ATGACCTTCGCAACGCGCAGCTCTAATCCGCCCAATGCTTTCCCTGTCTCCGACCGCCACGCTGCCGCTCATGCCAAGGC CTGCAACACCGCACGCAGCACCCGACGCAGCGCCAGAGTGCTGGCCATCGCGCTGTTCGCTGCCGCCCAGCTCGACGCGC AGACCATCGATACCAGTGCTCCGTTGCCGCCGGTCCGGGTGTGGCACGGTGCAAGCGAGGCATTGATCGTGTCGCCCGAC GATCCGTGGATCACGCCGGCCGAGCGCAGCGATTTCGTCAGCACGCCCAGCGACGCGCAAACGCGTGCGTGGTTGCATCG GCTGGTCGCCGCCTCGCCGCTGCTGTCGCTGGAGGTGTTCGGCAAGACCAGCGAAGGGCGCGATCTGCTGCTGGTGCGCG CGCGCAAGGGCAAGCCCGGCAAACCGGTCGTGCTGGCACAGGCCGGCATCCACGGCGGCGAGATCGATGGCAAGGACGCC GGCCTGATGCTGCTGCGCGATATTGCACAACGCGGCAAGGACGATCTGCTGGACGAGGTAGATTTCGTGTTCGTCCCCAT CCTCAACAGCGATGGGCACGAACAACGCGGCCCACTCATCGGCGCCGCATTGCGCGGCCCGCAGCAAATGGGCTGGAATA CCACCACACACGGCATCAACCTCAATCGCGACTATCTGAAACTGGAAGCGCCGGAGACGCGCGCGATCGTCAAGCTGCTG CACACGCTCGACCCCGCGTTGTATATCGACCTGCATGTCAGTGGCGGGCTCGATCATCAGTACGACATCACCTTTACCTT CGCCGGCTGGGGCACCTATGCGCGTTCGCGCGCCACTGCCGGCTGGCTGCAGCGGCGCTTCACGCCAGCCGTCGACGCCG CGCTGCGCCGCCAGGGTCATGAACCTGCGATCTACCCCAGCCTGATCGACGAAGACGCGCCGCGCTCGGGCTTGCGCCAT TCGCCCGAAGGCCCGCGTTATTCCACCGGGTATGGCGACTTCGCCGGCATCACGACCGTGCTGGTGGAAAACCACCGCTT GAAGGCATACCGGCAACGCGTGCTCGGCGATTACGTGCTGCTGGAAGAAGCCCTGCGCGTGGTCGGCCGCGACGCACACG CCATCGAGGCCGCCAAGCGTGCCGATCGCGCGGCGCGCCCGCAGGCATTGATGGTGGCGTGGGAACGCCTGCCGCAGCCG ATCGACCACATTCCGTTCAAGGGCGTGACCTACACCCGCGCCCTGTCGCCAGTGTCCGGCCGACCGGAATTGCGCTGGGA AGGCCGCGACGAAACCTGGACGATGCCGGTCATCGGCTACCGGCAGACGCAGGCCGTGCAGTACCCGGTGGCCTGGTGGA TTCCGCCCGGCAACGACGATGTACTCGCCTTGCTCGATGCGCATGGCATCCACTACGACCGTCTGCACCAGCCAGCCCGG CGCGCGGTGCAGCAGATACGCATCACCAAGACCGGCAGCGATCAGGTCCCGCACACTCACGACGTGGAAGAAGTCTTTCC CGCCGGCAGCGTCCGCGTGCCGGCCGATCAACCGATGCGCATGTTGGCCGCCGCCTTGCTGGAACCGCGCAGCAGCGATT CGCTGCTGGCCAACGGACGTTTCCGCCATGCCGGCAGCCCCGACAGCGGGCTGTATGCCACCGAGCTGGTCGAATTCAGC GAACGCGTATTGCGCAGCGATGCCGCGTTACGCAGCGCGTTCGAGCAAAAACTGGCCAACGATGCGGCGTTCCGCGCCGA TGGCGATGCGCGCCTGCAGTGGGTTTATGCACGTTCGCCCTATGCAGCGATCAGCGGCTGGCGGTATCCGGTGCGGCGCG AAGTGATGCAATAG
Upstream 100 bases:
>100_bases TGCGGCGCGAACGTCCAGCCAGGCGCCTGCGCCGACACGGCTGACCGGCACCGGCACAAGCAGCAACCGTCGCCCACCAC TCGAGACCCTCATACCCCAC
Downstream 100 bases:
>100_bases CGCGCGCATGCCTGTGGCGCTCACCGCGGTGCAGGCGCCATCGCTGGCGCATGCTCGGCCATCAGTGCAATCACCCAATC GATGAATACTCGCAGCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxypeptidase; M14 Family Peptidase; Peptidase Family M; Zinc Carboxypeptidase; Zinc Carboxypeptidase Family; Zinc Carboxypeptidase Family Protein; Secreted Protein
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MTFATRSSNPPNAFPVSDRHAAAHAKACNTARSTRRSARVLAIALFAAAQLDAQTIDTSAPLPPVRVWHGASEALIVSPD DPWITPAERSDFVSTPSDAQTRAWLHRLVAASPLLSLEVFGKTSEGRDLLLVRARKGKPGKPVVLAQAGIHGGEIDGKDA GLMLLRDIAQRGKDDLLDEVDFVFVPILNSDGHEQRGPLIGAALRGPQQMGWNTTTHGINLNRDYLKLEAPETRAIVKLL HTLDPALYIDLHVSGGLDHQYDITFTFAGWGTYARSRATAGWLQRRFTPAVDAALRRQGHEPAIYPSLIDEDAPRSGLRH SPEGPRYSTGYGDFAGITTVLVENHRLKAYRQRVLGDYVLLEEALRVVGRDAHAIEAAKRADRAARPQALMVAWERLPQP IDHIPFKGVTYTRALSPVSGRPELRWEGRDETWTMPVIGYRQTQAVQYPVAWWIPPGNDDVLALLDAHGIHYDRLHQPAR RAVQQIRITKTGSDQVPHTHDVEEVFPAGSVRVPADQPMRMLAAALLEPRSSDSLLANGRFRHAGSPDSGLYATELVEFS ERVLRSDAALRSAFEQKLANDAAFRADGDARLQWVYARSPYAAISGWRYPVRREVMQ
Sequences:
>Translated_617_residues MTFATRSSNPPNAFPVSDRHAAAHAKACNTARSTRRSARVLAIALFAAAQLDAQTIDTSAPLPPVRVWHGASEALIVSPD DPWITPAERSDFVSTPSDAQTRAWLHRLVAASPLLSLEVFGKTSEGRDLLLVRARKGKPGKPVVLAQAGIHGGEIDGKDA GLMLLRDIAQRGKDDLLDEVDFVFVPILNSDGHEQRGPLIGAALRGPQQMGWNTTTHGINLNRDYLKLEAPETRAIVKLL HTLDPALYIDLHVSGGLDHQYDITFTFAGWGTYARSRATAGWLQRRFTPAVDAALRRQGHEPAIYPSLIDEDAPRSGLRH SPEGPRYSTGYGDFAGITTVLVENHRLKAYRQRVLGDYVLLEEALRVVGRDAHAIEAAKRADRAARPQALMVAWERLPQP IDHIPFKGVTYTRALSPVSGRPELRWEGRDETWTMPVIGYRQTQAVQYPVAWWIPPGNDDVLALLDAHGIHYDRLHQPAR RAVQQIRITKTGSDQVPHTHDVEEVFPAGSVRVPADQPMRMLAAALLEPRSSDSLLANGRFRHAGSPDSGLYATELVEFS ERVLRSDAALRSAFEQKLANDAAFRADGDARLQWVYARSPYAAISGWRYPVRREVMQ >Mature_616_residues TFATRSSNPPNAFPVSDRHAAAHAKACNTARSTRRSARVLAIALFAAAQLDAQTIDTSAPLPPVRVWHGASEALIVSPDD PWITPAERSDFVSTPSDAQTRAWLHRLVAASPLLSLEVFGKTSEGRDLLLVRARKGKPGKPVVLAQAGIHGGEIDGKDAG LMLLRDIAQRGKDDLLDEVDFVFVPILNSDGHEQRGPLIGAALRGPQQMGWNTTTHGINLNRDYLKLEAPETRAIVKLLH TLDPALYIDLHVSGGLDHQYDITFTFAGWGTYARSRATAGWLQRRFTPAVDAALRRQGHEPAIYPSLIDEDAPRSGLRHS PEGPRYSTGYGDFAGITTVLVENHRLKAYRQRVLGDYVLLEEALRVVGRDAHAIEAAKRADRAARPQALMVAWERLPQPI DHIPFKGVTYTRALSPVSGRPELRWEGRDETWTMPVIGYRQTQAVQYPVAWWIPPGNDDVLALLDAHGIHYDRLHQPARR AVQQIRITKTGSDQVPHTHDVEEVFPAGSVRVPADQPMRMLAAALLEPRSSDSLLANGRFRHAGSPDSGLYATELVEFSE RVLRSDAALRSAFEQKLANDAAFRADGDARLQWVYARSPYAAISGWRYPVRREVMQ
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68218; Mature: 68087
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFATRSSNPPNAFPVSDRHAAAHAKACNTARSTRRSARVLAIALFAAAQLDAQTIDTSA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCC PLPPVRVWHGASEALIVSPDDPWITPAERSDFVSTPSDAQTRAWLHRLVAASPLLSLEVF CCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE GKTSEGRDLLLVRARKGKPGKPVVLAQAGIHGGEIDGKDAGLMLLRDIAQRGKDDLLDEV CCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCC DFVFVPILNSDGHEQRGPLIGAALRGPQQMGWNTTTHGINLNRDYLKLEAPETRAIVKLL CEEEEEEECCCCCCCCCCEEEHHHCCCHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH HTLDPALYIDLHVSGGLDHQYDITFTFAGWGTYARSRATAGWLQRRFTPAVDAALRRQGH HHCCCEEEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCC EPAIYPSLIDEDAPRSGLRHSPEGPRYSTGYGDFAGITTVLVENHRLKAYRQRVLGDYVL CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH LEEALRVVGRDAHAIEAAKRADRAARPQALMVAWERLPQPIDHIPFKGVTYTRALSPVSG HHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCCHHHCCCCCCC RPELRWEGRDETWTMPVIGYRQTQAVQYPVAWWIPPGNDDVLALLDAHGIHYDRLHQPAR CCCEEECCCCCEEEECEECCCCCCEEECCEEEEECCCCCCEEEEEECCCCCHHHHHHHHH RAVQQIRITKTGSDQVPHTHDVEEVFPAGSVRVPADQPMRMLAAALLEPRSSDSLLANGR HHHHHEEEEECCCCCCCCCCCHHHHCCCCCEECCCCCHHHHHHHHHHCCCCCCCEEECCE FRHAGSPDSGLYATELVEFSERVLRSDAALRSAFEQKLANDAAFRADGDARLQWVYARSP ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC YAAISGWRYPVRREVMQ CHHHCCCCCHHHHHHCC >Mature Secondary Structure TFATRSSNPPNAFPVSDRHAAAHAKACNTARSTRRSARVLAIALFAAAQLDAQTIDTSA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCC PLPPVRVWHGASEALIVSPDDPWITPAERSDFVSTPSDAQTRAWLHRLVAASPLLSLEVF CCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE GKTSEGRDLLLVRARKGKPGKPVVLAQAGIHGGEIDGKDAGLMLLRDIAQRGKDDLLDEV CCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCC DFVFVPILNSDGHEQRGPLIGAALRGPQQMGWNTTTHGINLNRDYLKLEAPETRAIVKLL CEEEEEEECCCCCCCCCCEEEHHHCCCHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH HTLDPALYIDLHVSGGLDHQYDITFTFAGWGTYARSRATAGWLQRRFTPAVDAALRRQGH HHCCCEEEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCC EPAIYPSLIDEDAPRSGLRHSPEGPRYSTGYGDFAGITTVLVENHRLKAYRQRVLGDYVL CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH LEEALRVVGRDAHAIEAAKRADRAARPQALMVAWERLPQPIDHIPFKGVTYTRALSPVSG HHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCCHHHCCCCCCC RPELRWEGRDETWTMPVIGYRQTQAVQYPVAWWIPPGNDDVLALLDAHGIHYDRLHQPAR CCCEEECCCCCEEEECEECCCCCCEEECCEEEEECCCCCCEEEEEECCCCCHHHHHHHHH RAVQQIRITKTGSDQVPHTHDVEEVFPAGSVRVPADQPMRMLAAALLEPRSSDSLLANGR HHHHHEEEEECCCCCCCCCCCHHHHCCCCCEECCCCCHHHHHHHHHHCCCCCCCEEECCE FRHAGSPDSGLYATELVEFSERVLRSDAALRSAFEQKLANDAAFRADGDARLQWVYARSP ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC YAAISGWRYPVRREVMQ CHHHCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA