| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244480
Identifier: 21244480
GI number: 21244480
Start: 4429537
End: 4430859
Strand: Direct
Name: 21244480
Synonym: XAC3755
Alternate gene names: NA
Gene position: 4429537-4430859 (Clockwise)
Preceding gene: 21244479
Following gene: 21244485
Centisome position: 85.59
GC content: 67.2
Gene sequence:
>1323_bases ATGAGCGACGAGATCGAAAGCGACGGCGAGCTGGGCACGCCCATCTGGGCGGCATTCGGCGACCTGATGTCGGTGTTGCT GGGCGCGTTCGTGCTGATCCTGGTCGGCGTGATCGGCGTGCAGTTGCAACTGTCCAGCCGCCTGGACGCGGAGGTCAAAC AACGCCAGGCCGAAGCGCAACGTCGGCAAACGCTGGAACAGGCATTGGCCGCACCGTTGGCTGCCGGCCGCGTGACCCTG GTCGATGGCCGTATCGGCATTCGCGGCAATGTGCTGTTTGCGTTCAACTCCGACCAACTGCAGCCGGAAGGGCGCGAGGT ATTGAAGTCGCTGGCGAGGCCGTTGACGCAATACCTGCGCGCGCGACGAGATCCTGATGGTCAGCGGATTTACCGACGAC CGCCCAGTGCTGGGCGGCAATCGCCGCTACGCCGACAACTGGGAACTGTCCGCGCAACGCGCGCTCACGGTGACCCGTGC CCTGATCGCCGAAGGCGTGCCGGCGTCATCGGTGTTCGCGGCCGCATTCGGCTCGCAGCAACCGGTGGATTCCAACGCCG ACGAAGCCCGCCGCGCGAAAAATCGCCGCGTGGAGATCGCGCCGATCGCGCGCCCGTCGTCGCGCGCAGGCGCATCGGCG CAGCCCGCAGCAACCACCGCACCGCGATGAGCAAGCCGGCACTCTCCGTGCGCGCGCAACTGGAGCGCTGGCGCAGCCAG GGCGCCGATCGGCTGGATCCGGTGCACTTCCATCTGATGGAAACGTTGGCAGCACGTGCCGATGCGCAGGCCGATGCGGT GCGTGAGGTGCTGGAACACAAGCTTGGCGCCATGGTCGATGGCTATGCGACAGCGCTGCAGCAGACAGCGCGTCGCCGTG CCGGGAGCCATACAGTGCCTGCAGCGTCGCCGCAGCCCAGCGCCTTGGGTACGCTCACCGCGCAGATGGCCGGGCATGCG GCGCTGATGGAAGTGGACAGCCGCAAGACTGCCAGCGCAGATGCCATGCTGTTTCCGGAGCTGCCGGCGCTGGACGACTT TCGTCGCACCTGGACCACCGTGCGCACCGCCAGCCAGGTGCGGCAGTCGCTGCAGGATGCGCCCAAGGATGCCGGCCCGC TCAATTCCAGCGTGCTGGTGCATCGCTGCATCACGCTGATGCGCGAGCGCTCGCCGGGCTATCTGCAGCACTTTCTCGGC TACGTGGATGCGTTGTCGTGGCTGGAGCAGCTGCACACCGGCGGCGCCTTGGCCAACGAGGAGGCTGCACCGGCGACGCC GGGCAGGAAACGCAGCAAGAGTCCGTCGAAACGACGCAGTTAG
Upstream 100 bases:
>100_bases GCGAAGTGGTCGACCTCAGCATGCTCTCGCAGAAGCAGATCATCGAAGAACTGCGCCAGCTCGATCGCGGGCGTGGCGAA CGCGGCGAAGCAGAAACGGC
Downstream 100 bases:
>100_bases ATCCGCGATCGGTCCCGATCTACGTCGGGCAGCCTTGCGCAGGCTCCGATCGCAGAGATGCATCCCGGCACAGCGTGTGC GGGGCCCCGCTGTGAGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: OmpA/MotB Domain-Containing Protein; OmpA Family Protein; Chemotaxis MotB Protein; Outer Membrane Protein; OmpA Family; Transmembrane Protein OmpA/MotB Motif; OmpA/MotB; Flagellar Motor Protein
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSDEIESDGELGTPIWAAFGDLMSVLLGAFVLILVGVIGVQLQLSSRLDAEVKQRQAEAQRRQTLEQALAAPLAAGRVTL VDGRIGIRGNVLFAFNSDQLQPEGREVLKSLARPLTQYLRARRDPDGQRIYRRPPSAGRQSPLRRQLGTVRATRAHGDPC PDRRRRAGVIGVRGRIRLAATGGFQRRRSPPREKSPRGDRADRAPVVARRRIGAARSNHRTAMSKPALSVRAQLERWRSQ GADRLDPVHFHLMETLAARADAQADAVREVLEHKLGAMVDGYATALQQTARRRAGSHTVPAASPQPSALGTLTAQMAGHA ALMEVDSRKTASADAMLFPELPALDDFRRTWTTVRTASQVRQSLQDAPKDAGPLNSSVLVHRCITLMRERSPGYLQHFLG YVDALSWLEQLHTGGALANEEAAPATPGRKRSKSPSKRRS
Sequences:
>Translated_440_residues MSDEIESDGELGTPIWAAFGDLMSVLLGAFVLILVGVIGVQLQLSSRLDAEVKQRQAEAQRRQTLEQALAAPLAAGRVTL VDGRIGIRGNVLFAFNSDQLQPEGREVLKSLARPLTQYLRARRDPDGQRIYRRPPSAGRQSPLRRQLGTVRATRAHGDPC PDRRRRAGVIGVRGRIRLAATGGFQRRRSPPREKSPRGDRADRAPVVARRRIGAARSNHRTAMSKPALSVRAQLERWRSQ GADRLDPVHFHLMETLAARADAQADAVREVLEHKLGAMVDGYATALQQTARRRAGSHTVPAASPQPSALGTLTAQMAGHA ALMEVDSRKTASADAMLFPELPALDDFRRTWTTVRTASQVRQSLQDAPKDAGPLNSSVLVHRCITLMRERSPGYLQHFLG YVDALSWLEQLHTGGALANEEAAPATPGRKRSKSPSKRRS >Mature_439_residues SDEIESDGELGTPIWAAFGDLMSVLLGAFVLILVGVIGVQLQLSSRLDAEVKQRQAEAQRRQTLEQALAAPLAAGRVTLV DGRIGIRGNVLFAFNSDQLQPEGREVLKSLARPLTQYLRARRDPDGQRIYRRPPSAGRQSPLRRQLGTVRATRAHGDPCP DRRRRAGVIGVRGRIRLAATGGFQRRRSPPREKSPRGDRADRAPVVARRRIGAARSNHRTAMSKPALSVRAQLERWRSQG ADRLDPVHFHLMETLAARADAQADAVREVLEHKLGAMVDGYATALQQTARRRAGSHTVPAASPQPSALGTLTAQMAGHAA LMEVDSRKTASADAMLFPELPALDDFRRTWTTVRTASQVRQSLQDAPKDAGPLNSSVLVHRCITLMRERSPGYLQHFLGY VDALSWLEQLHTGGALANEEAAPATPGRKRSKSPSKRRS
Specific function: Unknown
COG id: COG1360
COG function: function code N; Flagellar motor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48223; Mature: 48091
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEIESDGELGTPIWAAFGDLMSVLLGAFVLILVGVIGVQLQLSSRLDAEVKQRQAEAQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RRQTLEQALAAPLAAGRVTLVDGRIGIRGNVLFAFNSDQLQPEGREVLKSLARPLTQYLR HHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH ARRDPDGQRIYRRPPSAGRQSPLRRQLGTVRATRAHGDPCPDRRRRAGVIGVRGRIRLAA HHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEECCEEEEEE TGGFQRRRSPPREKSPRGDRADRAPVVARRRIGAARSNHRTAMSKPALSVRAQLERWRSQ CCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHC GADRLDPVHFHLMETLAARADAQADAVREVLEHKLGAMVDGYATALQQTARRRAGSHTVP CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AASPQPSALGTLTAQMAGHAALMEVDSRKTASADAMLFPELPALDDFRRTWTTVRTASQV CCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH RQSLQDAPKDAGPLNSSVLVHRCITLMRERSPGYLQHFLGYVDALSWLEQLHTGGALANE HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC EAAPATPGRKRSKSPSKRRS CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDEIESDGELGTPIWAAFGDLMSVLLGAFVLILVGVIGVQLQLSSRLDAEVKQRQAEAQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH RRQTLEQALAAPLAAGRVTLVDGRIGIRGNVLFAFNSDQLQPEGREVLKSLARPLTQYLR HHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH ARRDPDGQRIYRRPPSAGRQSPLRRQLGTVRATRAHGDPCPDRRRRAGVIGVRGRIRLAA HHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEECCEEEEEE TGGFQRRRSPPREKSPRGDRADRAPVVARRRIGAARSNHRTAMSKPALSVRAQLERWRSQ CCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHC GADRLDPVHFHLMETLAARADAQADAVREVLEHKLGAMVDGYATALQQTARRRAGSHTVP CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AASPQPSALGTLTAQMAGHAALMEVDSRKTASADAMLFPELPALDDFRRTWTTVRTASQV CCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH RQSLQDAPKDAGPLNSSVLVHRCITLMRERSPGYLQHFLGYVDALSWLEQLHTGGALANE HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC EAAPATPGRKRSKSPSKRRS CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA