| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244385
Identifier: 21244385
GI number: 21244385
Start: 4338117
End: 4338764
Strand: Reverse
Name: 21244385
Synonym: XAC3660
Alternate gene names: NA
Gene position: 4338764-4338117 (Counterclockwise)
Preceding gene: 21244386
Following gene: 21244384
Centisome position: 83.83
GC content: 69.44
Gene sequence:
>648_bases GTGAGGGCCGCGCTGCTGACCATCGCCGCGCTCGGCGTGCTGCCGTGGACAACCGCGGCCGCACGCGAATGCGAGAGCAC GCTCGGCCGCGGCTGGCCGCCGGCCGTGGGCAACTACGGCACGGCCGTCACCACGCTGCTGGATGGCGGCACCAAGCCCG CCTTGTCGTTGCTGACCCTGCCCACACGTGGCGTGGAGAGCGCGGTGTCGTTGGTGCCGGGCAAGGAGGGCGCCGACTGG ACCCTGCGGCATAGCCGCGCCGACGAGCGCGTCTACAGCTGGGTCAGCCAGACTGACCGCGGCAGCGTGCAGTTCCGCAC CGAGCAGACCCCGGAAACGGTCGAGATCCCGATTCCGGCGGCCCTGGCCAAGCGCTTGGTCAGCAACTGGACCAACACGC TGACCCAGCTCGCACCGAACGGACGCACCGCCCCGGTGAGCGAGGGCGAAGTGCTCTCGTTCCAGGTCGATGGCGTGCGC TACAGCGGCGCTCGCCCCAGCTGCGGCGCCGGCGAGTTGCTGCTGAAACAGGCCGCGCTGCTGATCGAAGCCAGCGAAGG CAAGGAAAAGAAGCGCGACAAGCGCTGGACCCAAATCGAATCGTCGCTGGATGAACTCCAGCAGACGCTTGCCGGCACGG CCGGTTGA
Upstream 100 bases:
>100_bases TGTCGCTGAGCTACGACCACCGGGTCATCGACGGCGCCCTGGCAGCCCGTTTCACCACCTATCTCAGCCAGGTGCTGGCC GACATGCGTCGCGTCCTGCT
Downstream 100 bases:
>100_bases GCTACAGGAGAAGCAAATGGCGGTCATTGAAATCAAGGTTCCCGACATCGGCGATTACAGCGATGTCCCCGTCATCGAAG TGCTGGTCGCCGTTGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRAALLTIAALGVLPWTTAAARECESTLGRGWPPAVGNYGTAVTTLLDGGTKPALSLLTLPTRGVESAVSLVPGKEGADW TLRHSRADERVYSWVSQTDRGSVQFRTEQTPETVEIPIPAALAKRLVSNWTNTLTQLAPNGRTAPVSEGEVLSFQVDGVR YSGARPSCGAGELLLKQAALLIEASEGKEKKRDKRWTQIESSLDELQQTLAGTAG
Sequences:
>Translated_215_residues MRAALLTIAALGVLPWTTAAARECESTLGRGWPPAVGNYGTAVTTLLDGGTKPALSLLTLPTRGVESAVSLVPGKEGADW TLRHSRADERVYSWVSQTDRGSVQFRTEQTPETVEIPIPAALAKRLVSNWTNTLTQLAPNGRTAPVSEGEVLSFQVDGVR YSGARPSCGAGELLLKQAALLIEASEGKEKKRDKRWTQIESSLDELQQTLAGTAG >Mature_215_residues MRAALLTIAALGVLPWTTAAARECESTLGRGWPPAVGNYGTAVTTLLDGGTKPALSLLTLPTRGVESAVSLVPGKEGADW TLRHSRADERVYSWVSQTDRGSVQFRTEQTPETVEIPIPAALAKRLVSNWTNTLTQLAPNGRTAPVSEGEVLSFQVDGVR YSGARPSCGAGELLLKQAALLIEASEGKEKKRDKRWTQIESSLDELQQTLAGTAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22939; Mature: 22939
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAALLTIAALGVLPWTTAAARECESTLGRGWPPAVGNYGTAVTTLLDGGTKPALSLLTL CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHEEEC PTRGVESAVSLVPGKEGADWTLRHSRADERVYSWVSQTDRGSVQFRTEQTPETVEIPIPA CCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCH ALAKRLVSNWTNTLTQLAPNGRTAPVSEGEVLSFQVDGVRYSGARPSCGAGELLLKQAAL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHH LIEASEGKEKKRDKRWTQIESSLDELQQTLAGTAG HEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRAALLTIAALGVLPWTTAAARECESTLGRGWPPAVGNYGTAVTTLLDGGTKPALSLLTL CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHEEEC PTRGVESAVSLVPGKEGADWTLRHSRADERVYSWVSQTDRGSVQFRTEQTPETVEIPIPA CCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCH ALAKRLVSNWTNTLTQLAPNGRTAPVSEGEVLSFQVDGVRYSGARPSCGAGELLLKQAAL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHH LIEASEGKEKKRDKRWTQIESSLDELQQTLAGTAG HEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA