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The map label for this gene is atpF

Identifier: 21244378

GI number: 21244378

Start: 4332306

End: 4332776

Strand: Reverse

Name: atpF

Synonym: XAC3653

Alternate gene names: 21244378

Gene position: 4332776-4332306 (Counterclockwise)

Preceding gene: 21244379

Following gene: 21244377

Centisome position: 83.72

GC content: 60.72

Gene sequence:

>471_bases
ATGGATATCACCCTTACCATCTTTGCCCAGGCGCTGGCCTTCGCCGGTCTGATCTGGATCGTCGCGACCAAAATCTGGCC
GCCGCTGCTGCAGGCGATCGAAGAGCGTCAGCAAAAGATTGCTGAAGGTCTGGCTGCGGCCGACCGTAGTCAAAAGGATC
TGGCGCAGGCGCAGGAAAAGGTCAATGAAGCACTGAAGGACGCACGCACCAAGGCCAACGAGATCATCGATCAGGCCCAT
GCGCGCGCCAACCAGATCATCGAAGCGGCCAAGCTGGAGGCAATTGCCGAAGCCAACCGTCAGAAGGATCTGGCGCAGAC
CGAAATCGACGCATCCGCCACGCGTGCCCGCGAGGAGCTGCGCAAGCAGGTCTCGGTGCTGGCCGTCAGCGGTGCAGAAA
AGCTGCTCAAGCGCGAAATCGATGCCAACGCCCACAAGGCGCTGCTCGACGAGCTGGCGGCGGAGATTTAA

Upstream 100 bases:

>100_bases
GGATGTGGATGCCGCCCTTGGCGGTTGCATCCGCGGATGAAGGTCGGAAAGCGCCGCCGCGCGGTGGCGCTTTCACCCCT
AAACAGCGATTGAGCGACCC

Downstream 100 bases:

>100_bases
GCGATGAGTCAGGCCCTCACCCTTGCCCGTCCCTACGGCCGTGCCGCGTTTGCGATCGCGCGTGAGGGCGGCAACTTCGC
GCCCTGGTCCGATGCGCTGG

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDITLTIFAQALAFAGLIWIVATKIWPPLLQAIEERQQKIAEGLAAADRSQKDLAQAQEKVNEALKDARTKANEIIDQAH
ARANQIIEAAKLEAIAEANRQKDLAQTEIDASATRAREELRKQVSVLAVSGAEKLLKREIDANAHKALLDELAAEI

Sequences:

>Translated_156_residues
MDITLTIFAQALAFAGLIWIVATKIWPPLLQAIEERQQKIAEGLAAADRSQKDLAQAQEKVNEALKDARTKANEIIDQAH
ARANQIIEAAKLEAIAEANRQKDLAQTEIDASATRAREELRKQVSVLAVSGAEKLLKREIDANAHKALLDELAAEI
>Mature_156_residues
MDITLTIFAQALAFAGLIWIVATKIWPPLLQAIEERQQKIAEGLAAADRSQKDLAQAQEKVNEALKDARTKANEIIDQAH
ARANQIIEAAKLEAIAEANRQKDLAQTEIDASATRAREELRKQVSVLAVSGAEKLLKREIDANAHKALLDELAAEI

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=46.1538461538462, Blast_Score=131, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_XANAC (Q8PGG3)

Other databases:

- EMBL:   AE008923
- RefSeq:   NP_643960.1
- ProteinModelPortal:   Q8PGG3
- GeneID:   1157724
- GenomeReviews:   AE008923_GR
- KEGG:   xac:XAC3653
- HOGENOM:   HBG617328
- OMA:   FILAWFT
- ProtClustDB:   PRK05759
- BioCyc:   XAXO190486:XAC3653-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17098; Mature: 17098

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1281c874)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDITLTIFAQALAFAGLIWIVATKIWPPLLQAIEERQQKIAEGLAAADRSQKDLAQAQEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VNEALKDARTKANEIIDQAHARANQIIEAAKLEAIAEANRQKDLAQTEIDASATRAREEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQVSVLAVSGAEKLLKREIDANAHKALLDELAAEI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCH
>Mature Secondary Structure
MDITLTIFAQALAFAGLIWIVATKIWPPLLQAIEERQQKIAEGLAAADRSQKDLAQAQEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VNEALKDARTKANEIIDQAHARANQIIEAAKLEAIAEANRQKDLAQTEIDASATRAREEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQVSVLAVSGAEKLLKREIDANAHKALLDELAAEI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217