| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is bfrC
Identifier: 21244254
GI number: 21244254
Start: 4173131
End: 4175170
Strand: Direct
Name: bfrC
Synonym: XAC3529
Alternate gene names: NA
Gene position: 4173131-4175170 (Clockwise)
Preceding gene: 21244253
Following gene: 21244255
Centisome position: 80.63
GC content: 65.74
Gene sequence:
>2040_bases ATGTCCGTTGCCCTCCCCCTGCTCTCCCGCTGCCCGCTTGCGCTTACACTGGCGTTTTGCTGCGCCCCTGCACTGGCGCA GCAGCAACCCGGCGCCGATGCAGTCGAACTGGACGCGGTCAACGTGCGTGGCGAAGGTGTGGAGACCAGTACGGCTTTAA GTGGATTTGGCGCCACCCGACTACTGGACGCGCCCGCCTCGATCGCGGTCATCGATCGTGCGCAATTGCTCGATCGTCAG GCGCGCGTACTCAGTGAGGTATTGCGCGCCGATGCCTCCGCCGGCGATGCGTACGCGCCGATCGGCTATTACGAAAACTT CGTGGTGCGCGGCTATTCGCTCAATGCCGCCAACAGCTACCGCATCAACGGCATGAGCGCGGTAGGCGAACAATCGATCG CACTGGAAAACAAGCAGCAGGTGCAATTGCTCAAAGGCCTGGCCGGGCTGCAATCGGGCGTCAACGAACCGGCCGGGCTG ATCGACTACCGCACCAAGCGGCCCGAGCACGTGCGCAGCGTCACCCTGGGCACCGACGAACAGGGCTCGCGCTATGTCGC CGCCGATCTGGGCGACTGGTTCGGTGCCGAACGCACGCTGGGGTTACGCGTCAACGCCGCACGCGAAGACATCGACAGCT ATGTCGATCATGCCGACGGCTACCGCAATTTCCTGTCGCTGGCCGGCGACTGGAAGATCTCCCCGCAGGCGCTGCTGCAG CTGGACGTGGAATATCAGCACCGGCAACAGCGCTCGGTGCCAGGCTATCAACTGCTGGGCGGCACGCAGGTACCGCGCGA TATCGATGTGCACCGCCTGCTCGGCTACCAGCCGTGGGCGCGGCCAGTGGAAATGGATTCGCTCGACGCGCAGCTGCGTT ACGCCTACCAGTTCAACGACGACTGGCGCGCCACTACCGAAGCATCGCGCAGTCGTTCGAAGATCAACGATTTCTCCGCA TTCGCCTGGGGCTGTTATGGCGCGGCAAGCTGCGCCGACATCGCCACCCCGAACGTCTTCAGCGCGCAGGGCGAGTACGA CATCTACGATTACCGTAGCCCCGACGACACCCGCGTGCACGATCAGCTGCGTGCCACGCTCGAAGGCCATGTCGCGACCG GCGCGCTGGAGCATCACCTGAGCATCGGCGGCGAATGGCTGCGCCGCACCATCGACCGTTTTGGTTCGGTCAACGAATTC GTCGGCAGCGGCAGCATCGATCGCGACCCGGACGTGTTCGCGCAGACGGATGTTGCGCTGGATCCCAAGCAGCGTCGTCT GGACAGCCGCCAGCGTGCGCTGCTCATGGCCGACCGGATCGGCCTGGGTGCGGGGAACTGTCGCTTGGCGCGCGCTATGT GCAACTGGACGAACGCAGCTTCGATCGCGACGGCCAGCTGGAACGACGCACGCGCAAAGACACGGTGCTGCCGCAGGCAG CGCTGTTGTTCAAGCCGCAGCAGAACATGTCGCTGTATGCCAGCTACGCCAAGAGCCTGGCGGCCGGCGGCACGGCGCCG TGGTTTGCCGATAACGCCGACGAGATCCTGCCGCCCACCGATGCGTACCAGCTGGAAACCGGCGCAAAGATCGACCTGCA GGGCCTGCGCCTGGGCGCGGCACTGTTCGACATCCGCCAGGCTTACCAGTTCACCCAACCGCAGGCCGATGGCGGTCTGC TCTACGTGCAGCAGGGTCGCCTGCATAACCGCGGCCTGGAGCTGTCTGCCGACGGCGCAGCGACCCGGCAGCTGCGTCTG TTCGCCAGCGTCGCGGCAATCCGCGCGCGCGCGGAGGACACCGGCATTGGCGAGTACGAAGGCCATCAGGCGATCAACGT GCCCAGGCTGCGCGCCAGCGTGCAGGCCGATTACAGCGTGCCAGGTATCGATGGTCTGGCACTGCTGGGCGGCGTGCAAT ACAGCGGGCGCAAGTTTGCCGACCGTCTCGGCAACGCCAGCGTGCCGGCCTACACCGTCGCCAACCTGGGTGCCCGCTAC GCCACGGCGCTGGGCGGGCTGGCGACTACCTGGCGCTTGA
Upstream 100 bases:
>100_bases TGGTTCGCCAGCGCCGATGGTCGGCACCTGCTCGAACACCTGCACGCACGTGCGCGCCGACTGCCGTGAGCACCTTCCCT TCTCTGTCGAGTCTTGCCCA
Downstream 100 bases:
>100_bases ACGTGGACAACGCGTTCGACAAGCGCTATTGGCGCGATTCCGGCGAATATCAGGGCGATGCGTATCTGTTCCCCGGCGCA CCACGCACTGCACGGCTGAC
Product: iron receptor
Products: NA
Alternate protein names: Ferrichrome-Iron Receptor; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Ferric Siderophore Receptor; NB-Dependent Receptor; Ferric Siderophore Receptor Protein; NB-Dependent Siderophore Receptor Family Protein; NB-Dependent Siderophore Receptor Subfamily; Ferrichrome-Iron Receptor Protein; NB-Dependent Outer Membrane Receptor; NB-Dependent Ferric Siderophore Receptor; Iron Receptor; Ferrisiderophore Receptor Protein; Outer Membrane nB-Dependent Receptor Protein; Outer Membrane Siderophore Receptor; Ferrisiderophore Receptor; Ferric Anguibactin Receptor; Nb Dependent Receptor; Ferrichrome Iron Receptor; Ferric Iron Siderophore Receptor; Nb-Dependent Siderophore Receptor; NB Dependent Receptor Protein; Outer Membrane Heme Receptor; NB-Dependent Siderophore Receptor Family; Siderophore Receptor; Outer Membrane Ferrichrome-Iron Receptor; Ferrichrome Receptor Protein; Outer Membrane Receptor Proteins; NB-Dependent Siderophore Receptor FpvA; NB-Dependent Siderophore Receptor Protein
Number of amino acids: Translated: 679; Mature: 678
Protein sequence:
>679_residues MSVALPLLSRCPLALTLAFCCAPALAQQQPGADAVELDAVNVRGEGVETSTALSGFGATRLLDAPASIAVIDRAQLLDRQ ARVLSEVLRADASAGDAYAPIGYYENFVVRGYSLNAANSYRINGMSAVGEQSIALENKQQVQLLKGLAGLQSGVNEPAGL IDYRTKRPEHVRSVTLGTDEQGSRYVAADLGDWFGAERTLGLRVNAAREDIDSYVDHADGYRNFLSLAGDWKISPQALLQ LDVEYQHRQQRSVPGYQLLGGTQVPRDIDVHRLLGYQPWARPVEMDSLDAQLRYAYQFNDDWRATTEASRSRSKINDFSA FAWGCYGAASCADIATPNVFSAQGEYDIYDYRSPDDTRVHDQLRATLEGHVATGALEHHLSIGGEWLRRTIDRFGSVNEF VGSGSIDRDPDVFAQTDVALDPKQRRLDSRQRALLMADRIGLGAGNCRLARAMCNWTNAASIATASWNDARAKTRCCRRQ RCCSSRSRTCRCMPATPRAWRPAARRRGLPITPTRSCRPPMRTSWKPAQRSTCRACAWARHCSTSARLTSSPNRRPMAVC STCSRVACITAAWSCLPTAQRPGSCVCSPASRQSARARRTPALASTKAIRRSTCPGCAPACRPITACQVSMVWHCWAACN TAGASLPTVSATPACRPTPSPTWVPATPRRWAGWRLPGA
Sequences:
>Translated_679_residues MSVALPLLSRCPLALTLAFCCAPALAQQQPGADAVELDAVNVRGEGVETSTALSGFGATRLLDAPASIAVIDRAQLLDRQ ARVLSEVLRADASAGDAYAPIGYYENFVVRGYSLNAANSYRINGMSAVGEQSIALENKQQVQLLKGLAGLQSGVNEPAGL IDYRTKRPEHVRSVTLGTDEQGSRYVAADLGDWFGAERTLGLRVNAAREDIDSYVDHADGYRNFLSLAGDWKISPQALLQ LDVEYQHRQQRSVPGYQLLGGTQVPRDIDVHRLLGYQPWARPVEMDSLDAQLRYAYQFNDDWRATTEASRSRSKINDFSA FAWGCYGAASCADIATPNVFSAQGEYDIYDYRSPDDTRVHDQLRATLEGHVATGALEHHLSIGGEWLRRTIDRFGSVNEF VGSGSIDRDPDVFAQTDVALDPKQRRLDSRQRALLMADRIGLGAGNCRLARAMCNWTNAASIATASWNDARAKTRCCRRQ RCCSSRSRTCRCMPATPRAWRPAARRRGLPITPTRSCRPPMRTSWKPAQRSTCRACAWARHCSTSARLTSSPNRRPMAVC STCSRVACITAAWSCLPTAQRPGSCVCSPASRQSARARRTPALASTKAIRRSTCPGCAPACRPITACQVSMVWHCWAACN TAGASLPTVSATPACRPTPSPTWVPATPRRWAGWRLPGA >Mature_678_residues SVALPLLSRCPLALTLAFCCAPALAQQQPGADAVELDAVNVRGEGVETSTALSGFGATRLLDAPASIAVIDRAQLLDRQA RVLSEVLRADASAGDAYAPIGYYENFVVRGYSLNAANSYRINGMSAVGEQSIALENKQQVQLLKGLAGLQSGVNEPAGLI DYRTKRPEHVRSVTLGTDEQGSRYVAADLGDWFGAERTLGLRVNAAREDIDSYVDHADGYRNFLSLAGDWKISPQALLQL DVEYQHRQQRSVPGYQLLGGTQVPRDIDVHRLLGYQPWARPVEMDSLDAQLRYAYQFNDDWRATTEASRSRSKINDFSAF AWGCYGAASCADIATPNVFSAQGEYDIYDYRSPDDTRVHDQLRATLEGHVATGALEHHLSIGGEWLRRTIDRFGSVNEFV GSGSIDRDPDVFAQTDVALDPKQRRLDSRQRALLMADRIGLGAGNCRLARAMCNWTNAASIATASWNDARAKTRCCRRQR CCSSRSRTCRCMPATPRAWRPAARRRGLPITPTRSCRPPMRTSWKPAQRSTCRACAWARHCSTSARLTSSPNRRPMAVCS TCSRVACITAAWSCLPTAQRPGSCVCSPASRQSARARRTPALASTKAIRRSTCPGCAPACRPITACQVSMVWHCWAACNT AGASLPTVSATPACRPTPSPTWVPATPRRWAGWRLPGA
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74130; Mature: 73999
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVALPLLSRCPLALTLAFCCAPALAQQQPGADAVELDAVNVRGEGVETSTALSGFGATR CCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCHH LLDAPASIAVIDRAQLLDRQARVLSEVLRADASAGDAYAPIGYYENFVVRGYSLNAANSY HCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCEEEEEEEECCCCCE RINGMSAVGEQSIALENKQQVQLLKGLAGLQSGVNEPAGLIDYRTKRPEHVRSVTLGTDE EECCHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHEEECCCCC QGSRYVAADLGDWFGAERTLGLRVNAAREDIDSYVDHADGYRNFLSLAGDWKISPQALLQ CCCEEEEECCHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEE LDVEYQHRQQRSVPGYQLLGGTQVPRDIDVHRLLGYQPWARPVEMDSLDAQLRYAYQFND ECCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEECC DWRATTEASRSRSKINDFSAFAWGCYGAASCADIATPNVFSAQGEYDIYDYRSPDDTRVH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCHHHH DQLRATLEGHVATGALEHHLSIGGEWLRRTIDRFGSVNEFVGSGSIDRDPDVFAQTDVAL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEECCCCCC DPKQRRLDSRQRALLMADRIGLGAGNCRLARAMCNWTNAASIATASWNDARAKTRCCRRQ CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHH RCCSSRSRTCRCMPATPRAWRPAARRRGLPITPTRSCRPPMRTSWKPAQRSTCRACAWAR HHHCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH HCSTSARLTSSPNRRPMAVCSTCSRVACITAAWSCLPTAQRPGSCVCSPASRQSARARRT HCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHCC PALASTKAIRRSTCPGCAPACRPITACQVSMVWHCWAACNTAGASLPTVSATPACRPTPS CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PTWVPATPRRWAGWRLPGA CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVALPLLSRCPLALTLAFCCAPALAQQQPGADAVELDAVNVRGEGVETSTALSGFGATR CCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCHH LLDAPASIAVIDRAQLLDRQARVLSEVLRADASAGDAYAPIGYYENFVVRGYSLNAANSY HCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCEEEEEEEECCCCCE RINGMSAVGEQSIALENKQQVQLLKGLAGLQSGVNEPAGLIDYRTKRPEHVRSVTLGTDE EECCHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHEEECCCCC QGSRYVAADLGDWFGAERTLGLRVNAAREDIDSYVDHADGYRNFLSLAGDWKISPQALLQ CCCEEEEECCHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEE LDVEYQHRQQRSVPGYQLLGGTQVPRDIDVHRLLGYQPWARPVEMDSLDAQLRYAYQFND ECCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEECC DWRATTEASRSRSKINDFSAFAWGCYGAASCADIATPNVFSAQGEYDIYDYRSPDDTRVH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCHHHH DQLRATLEGHVATGALEHHLSIGGEWLRRTIDRFGSVNEFVGSGSIDRDPDVFAQTDVAL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEECCCCCC DPKQRRLDSRQRALLMADRIGLGAGNCRLARAMCNWTNAASIATASWNDARAKTRCCRRQ CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHH RCCSSRSRTCRCMPATPRAWRPAARRRGLPITPTRSCRPPMRTSWKPAQRSTCRACAWAR HHHCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH HCSTSARLTSSPNRRPMAVCSTCSRVACITAAWSCLPTAQRPGSCVCSPASRQSARARRT HCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHCC PALASTKAIRRSTCPGCAPACRPITACQVSMVWHCWAACNTAGASLPTVSATPACRPTPS CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PTWVPATPRRWAGWRLPGA CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA