| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244253
Identifier: 21244253
GI number: 21244253
Start: 4171885
End: 4173099
Strand: Direct
Name: 21244253
Synonym: XAC3528
Alternate gene names: NA
Gene position: 4171885-4173099 (Clockwise)
Preceding gene: 21244239
Following gene: 21244254
Centisome position: 80.61
GC content: 67.49
Gene sequence:
>1215_bases TTGGTCTATACCACCTACCGACGCAGCACGGTCGCTGCGCCTGTCGGGCGTCGGCCCATGAACGTCCCTCACCAGGTGCA TGGCATGAGCCTGGAACTGGCATTGCCGGACTGGCCAGTACTGACCACCGATGAAATCCATCGCGTGCTGCAGCGGTTTG CGGCGGTGGGCCACCTCACTGCGTTGCGCTGGCATAGCGCGCGCCCGTTCTCTGCAGCGGCCTGCGTGGACACGGCAAGT GGCCCGGTCATCGTCAAACGCCACCACCGCAGTGTGCGCAGCGTGGCCGCGCTGCGCGAGGAACACAGCTTCATGGCCCA TCTGCGCTGGGCCGGCGCGCCGGTGGTGGAGGTGCTGCACGACGCCCAGGGCCGCACTGCGCTGGCGCACGCCGATTGGG TGTACGAAGTGCAGCGGGTCGGCGCAGGACGCGACCTCTACCGCGATGCGTTGTCGTGGACACCGTTCACCGATGTTGCG CATGCGCGGGCGGCCGGTGCTGCGTTGGCGCAACTGCATCGCGCGGCCCAGGGCTTCGATGCGCCGGCACGCTCCACCAG CATGCTGGTCGCCAATCTGCGATTGTTTGCGCAGGCAGACCCGGTGCAGGCGTTGCACGATGCCTTGCCAACGCGACCGC ACCTGGCAACGGCCCTGCAGGACCGCCCCTGGCAACACGATCTGGCCACCCACCTGCTGCCCTGGCATGCGCAGGCATGG CCGCTGCTGTCCGCGCCGGGCGCGCTACCGTCGCTGTGGACCCATGGCGACTGGCATGCGTCCAACCTGCTGTGGGACAC CAACGACGGAGCGACCCGCGTCAGCGCCATCTTCGATTTCGGATTGAGCGACTGCAGCAGCGCGCTGTTCGATCTGGCCA CCGCGATCGAACGCAACCTCATCCCCTGGTTGCGGCTGGACACCGGCGCACGCGCGCAGGCCGAGCTCGACCAGCTCGAC GCGCTGCTGGAGGGCTACGCGCAGCATCGCCCACTGGACGCAAACCACTTGCGCCGCCTGGCCGCATTGCTGCCGATCGT GCATGCCGACTTCGCTTTGAGCGAAATGGAATATTTCGCCGGCATCACGCGTTCGCCCGCCAATGTCGATATCGCCTATC ACCGCTATCTGCTCGGCCACGCGGACTGGTTCGCCAGCGCCGATGGTCGGCACCTGCTCGAACACCTGCACGCACGTGCG CGCCGACTGCCGTGA
Upstream 100 bases:
>100_bases GCCGCGCCCTGATGGCCGATGCGATGCGGCAACGGCCCGGCAGCGCCGTTCTTGTCCTCGACGGCGCGCGCGCCGCGTCC GCCGCCGTACTCCTGATCAA
Downstream 100 bases:
>100_bases GCACCTTCCCTTCTCTGTCGAGTCTTGCCCAATGTCCGTTGCCCTCCCCCTGCTCTCCCGCTGCCCGCTTGCGCTTACAC TGGCGTTTTGCTGCGCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Aminoglycoside Phospho Transferase; Secreted Protein
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MVYTTYRRSTVAAPVGRRPMNVPHQVHGMSLELALPDWPVLTTDEIHRVLQRFAAVGHLTALRWHSARPFSAAACVDTAS GPVIVKRHHRSVRSVAALREEHSFMAHLRWAGAPVVEVLHDAQGRTALAHADWVYEVQRVGAGRDLYRDALSWTPFTDVA HARAAGAALAQLHRAAQGFDAPARSTSMLVANLRLFAQADPVQALHDALPTRPHLATALQDRPWQHDLATHLLPWHAQAW PLLSAPGALPSLWTHGDWHASNLLWDTNDGATRVSAIFDFGLSDCSSALFDLATAIERNLIPWLRLDTGARAQAELDQLD ALLEGYAQHRPLDANHLRRLAALLPIVHADFALSEMEYFAGITRSPANVDIAYHRYLLGHADWFASADGRHLLEHLHARA RRLP
Sequences:
>Translated_404_residues MVYTTYRRSTVAAPVGRRPMNVPHQVHGMSLELALPDWPVLTTDEIHRVLQRFAAVGHLTALRWHSARPFSAAACVDTAS GPVIVKRHHRSVRSVAALREEHSFMAHLRWAGAPVVEVLHDAQGRTALAHADWVYEVQRVGAGRDLYRDALSWTPFTDVA HARAAGAALAQLHRAAQGFDAPARSTSMLVANLRLFAQADPVQALHDALPTRPHLATALQDRPWQHDLATHLLPWHAQAW PLLSAPGALPSLWTHGDWHASNLLWDTNDGATRVSAIFDFGLSDCSSALFDLATAIERNLIPWLRLDTGARAQAELDQLD ALLEGYAQHRPLDANHLRRLAALLPIVHADFALSEMEYFAGITRSPANVDIAYHRYLLGHADWFASADGRHLLEHLHARA RRLP >Mature_404_residues MVYTTYRRSTVAAPVGRRPMNVPHQVHGMSLELALPDWPVLTTDEIHRVLQRFAAVGHLTALRWHSARPFSAAACVDTAS GPVIVKRHHRSVRSVAALREEHSFMAHLRWAGAPVVEVLHDAQGRTALAHADWVYEVQRVGAGRDLYRDALSWTPFTDVA HARAAGAALAQLHRAAQGFDAPARSTSMLVANLRLFAQADPVQALHDALPTRPHLATALQDRPWQHDLATHLLPWHAQAW PLLSAPGALPSLWTHGDWHASNLLWDTNDGATRVSAIFDFGLSDCSSALFDLATAIERNLIPWLRLDTGARAQAELDQLD ALLEGYAQHRPLDANHLRRLAALLPIVHADFALSEMEYFAGITRSPANVDIAYHRYLLGHADWFASADGRHLLEHLHARA RRLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44798; Mature: 44798
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYTTYRRSTVAAPVGRRPMNVPHQVHGMSLELALPDWPVLTTDEIHRVLQRFAAVGHLT CEEECCCCCHHCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH ALRWHSARPFSAAACVDTASGPVIVKRHHRSVRSVAALREEHSFMAHLRWAGAPVVEVLH HHHCCCCCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH DAQGRTALAHADWVYEVQRVGAGRDLYRDALSWTPFTDVAHARAAGAALAQLHRAAQGFD CCCCCEEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC APARSTSMLVANLRLFAQADPVQALHDALPTRPHLATALQDRPWQHDLATHLLPWHAQAW CCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCC PLLSAPGALPSLWTHGDWHASNLLWDTNDGATRVSAIFDFGLSDCSSALFDLATAIERNL CCCCCCCCCCCCCCCCCEECCCCEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCC IPWLRLDTGARAQAELDQLDALLEGYAQHRPLDANHLRRLAALLPIVHADFALSEMEYFA CCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GITRSPANVDIAYHRYLLGHADWFASADGRHLLEHLHARARRLP CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MVYTTYRRSTVAAPVGRRPMNVPHQVHGMSLELALPDWPVLTTDEIHRVLQRFAAVGHLT CEEECCCCCHHCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH ALRWHSARPFSAAACVDTASGPVIVKRHHRSVRSVAALREEHSFMAHLRWAGAPVVEVLH HHHCCCCCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH DAQGRTALAHADWVYEVQRVGAGRDLYRDALSWTPFTDVAHARAAGAALAQLHRAAQGFD CCCCCEEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC APARSTSMLVANLRLFAQADPVQALHDALPTRPHLATALQDRPWQHDLATHLLPWHAQAW CCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCC PLLSAPGALPSLWTHGDWHASNLLWDTNDGATRVSAIFDFGLSDCSSALFDLATAIERNL CCCCCCCCCCCCCCCCCEECCCCEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCC IPWLRLDTGARAQAELDQLDALLEGYAQHRPLDANHLRRLAALLPIVHADFALSEMEYFA CCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GITRSPANVDIAYHRYLLGHADWFASADGRHLLEHLHARARRLP CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA