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The map label for this gene is yagA [C]

Identifier: 21244229

GI number: 21244229

Start: 4142035

End: 4142859

Strand: Direct

Name: yagA [C]

Synonym: XAC3504

Alternate gene names: 21244229

Gene position: 4142035-4142859 (Clockwise)

Preceding gene: 21244228

Following gene: 21244230

Centisome position: 80.03

GC content: 60.36

Gene sequence:

>825_bases
ATGCGGTACCTGATCGAGGTACACGCGCGGCCGCTGCGTCGGTCCTGTGCATGCGTCGGGCTTGCACGTGCGGCGTGGTA
TGCGCCGCCGCTCGACTGGACAGTGTGCGATGCCGGGTTGATCTCGGCGATCGCACGTGTTGTCGAAGATCGGCCGAGTC
GCGGCTTTTGGAAATGCAGCGACGTGCTGCGCAGGACGCGTCCTGACTGGAACCCGAAGAGAATCTATCGCGTGTACAAG
GCCATGCGGCTCAACCTGCGCCGCGCTGCGAAGCGGCGTCTTCCCAAGCGCGAGCGTGTCGCGCTGTATGTCCCAAGGTT
GCCTGATACCGTCTGGTCGGTCGACTTCATGAGCGACGCTTTGGCGTGCGGCCGACGCTTCCGCACCTTCAACGTGGTCG
ACGACTCCAACCGCGAGGTACTTCACATCGAGGTTGATACGTCGATCAACTCGCATCGTCTGGTGCGCGTGTTCGAGCAG
ATCAAGCACGATCATGGCCTGCCGCAGATTGTGCGTTCCGACAACGGGCCAGAGTTTCTGGGCGAAGCATTTACCAGCTG
GCTGAAGGTCAATGGCGTGGCGATCAAGTACATCCAACCCGGCAAACCGAACCAGAACGCCTTCATCGAACGCTTCAACC
GCACCTTCCGGGAAGAAGTGCTCGACCAGCACCTTTTCACCTGCCTCGACGATATCCGCCAAGCCATCCATTGGCGGATG
ATCGATTACAACGAAGAGCGACCCCATGACTCGCTCAGCGGCCTAACGCCCACCGAGTACCGCAACCAACACGCCAGAAG
GGCCACTTTTGGAGTGTCTGCTTGA

Upstream 100 bases:

>100_bases
CCAAGCTCAAGCGGATGTACGCCGACTTGGCGCTCGACAACGCGGCCATGAAGGATCTCATCGCAAAGAAACTCTAGGGC
CGGCGCGCGAGCGCGAGGCC

Downstream 100 bases:

>100_bases
CGAGGGAGCTTATGAGGCTAGAGCTGGTATGACAGAACTTTCAACGGTTCCAGTGTAGAATCACTGATACTGGCAATTCG
GGTTGTAATTTCTCACTTCA

Product: ISxac4 transposase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRYLIEVHARPLRRSCACVGLARAAWYAPPLDWTVCDAGLISAIARVVEDRPSRGFWKCSDVLRRTRPDWNPKRIYRVYK
AMRLNLRRAAKRRLPKRERVALYVPRLPDTVWSVDFMSDALACGRRFRTFNVVDDSNREVLHIEVDTSINSHRLVRVFEQ
IKHDHGLPQIVRSDNGPEFLGEAFTSWLKVNGVAIKYIQPGKPNQNAFIERFNRTFREEVLDQHLFTCLDDIRQAIHWRM
IDYNEERPHDSLSGLTPTEYRNQHARRATFGVSA

Sequences:

>Translated_274_residues
MRYLIEVHARPLRRSCACVGLARAAWYAPPLDWTVCDAGLISAIARVVEDRPSRGFWKCSDVLRRTRPDWNPKRIYRVYK
AMRLNLRRAAKRRLPKRERVALYVPRLPDTVWSVDFMSDALACGRRFRTFNVVDDSNREVLHIEVDTSINSHRLVRVFEQ
IKHDHGLPQIVRSDNGPEFLGEAFTSWLKVNGVAIKYIQPGKPNQNAFIERFNRTFREEVLDQHLFTCLDDIRQAIHWRM
IDYNEERPHDSLSGLTPTEYRNQHARRATFGVSA
>Mature_274_residues
MRYLIEVHARPLRRSCACVGLARAAWYAPPLDWTVCDAGLISAIARVVEDRPSRGFWKCSDVLRRTRPDWNPKRIYRVYK
AMRLNLRRAAKRRLPKRERVALYVPRLPDTVWSVDFMSDALACGRRFRTFNVVDDSNREVLHIEVDTSINSHRLVRVFEQ
IKHDHGLPQIVRSDNGPEFLGEAFTSWLKVNGVAIKYIQPGKPNQNAFIERFNRTFREEVLDQHLFTCLDDIRQAIHWRM
IDYNEERPHDSLSGLTPTEYRNQHARRATFGVSA

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786462, Length=170, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1789981, Length=229, Percent_Identity=24.4541484716157, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32083; Mature: 32083

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLIEVHARPLRRSCACVGLARAAWYAPPLDWTVCDAGLISAIARVVEDRPSRGFWKCS
CCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
DVLRRTRPDWNPKRIYRVYKAMRLNLRRAAKRRLPKRERVALYVPRLPDTVWSVDFMSDA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH
LACGRRFRTFNVVDDSNREVLHIEVDTSINSHRLVRVFEQIKHDHGLPQIVRSDNGPEFL
HHHHHHCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH
GEAFTSWLKVNGVAIKYIQPGKPNQNAFIERFNRTFREEVLDQHLFTCLDDIRQAIHWRM
HHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDYNEERPHDSLSGLTPTEYRNQHARRATFGVSA
CCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRYLIEVHARPLRRSCACVGLARAAWYAPPLDWTVCDAGLISAIARVVEDRPSRGFWKCS
CCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
DVLRRTRPDWNPKRIYRVYKAMRLNLRRAAKRRLPKRERVALYVPRLPDTVWSVDFMSDA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH
LACGRRFRTFNVVDDSNREVLHIEVDTSINSHRLVRVFEQIKHDHGLPQIVRSDNGPEFL
HHHHHHCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH
GEAFTSWLKVNGVAIKYIQPGKPNQNAFIERFNRTFREEVLDQHLFTCLDDIRQAIHWRM
HHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDYNEERPHDSLSGLTPTEYRNQHARRATFGVSA
CCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]