| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is modB [H]
Identifier: 21244084
GI number: 21244084
Start: 3956247
End: 3956939
Strand: Direct
Name: modB [H]
Synonym: XAC3359
Alternate gene names: 21244084
Gene position: 3956247-3956939 (Clockwise)
Preceding gene: 21244083
Following gene: 21244085
Centisome position: 76.44
GC content: 68.69
Gene sequence:
>693_bases TTGTCGATGTTCACCCCGGAAGAGCTGACCGCGATCGGCTTGAGTCTCAAGGTCGCGATCGTGGCAGCGCTCGCCAGCCT GCCGCCGGGCATTGCCTGCGGCTGGCTGCTGGCGCGGCGCCGCTTCCCCGGCAAGGCCCTGCTGGACGCGCTGCTGCATC TGCCCTTGGTGATGCCGCCGGTGGTCACCGGCTATGCGCTCTTGGTGGTATTGGGCACGCAGGGCCCGGTGGGCAGCTGG TTGCTGGAACACCTCGGGATCCAGTTCGCCTTCCGCTGGACCGGCGCGGCGCTGGCGTGCGCGGTCATGGGATTTCCGTT GATGGTGCGCGCGATTCGTCTGTCCATCGAAGCCACCGATCGTCGCCTGGAAGCGGCCGCCGCCACGCTGGGCGCCGGGC CGTGGCGGGTGTTTTTCAGCATCACCTTGCCGCTGGCCTGGCCAGGCCTGGTCGCCGGCGTGGTGCTCGCGTTCGCCAAG GCGCTCGGCGAGTTCGGCGCCACCATCACCTTCGTGTCGAATATCCCCGGCGAAACGCAAACCTTGTCGTCGGCCATCTA CGGGCTGATGCAGGTCCCGGGGATGGAATCGGGCATCTGGCGGCTGGCCGGGGTGGCGCTGGCGATTTCGCTGGCCGCGT TGCTGCTGTCCGAATGGCTGGTGCGCAGGCCGCATCCGCGCGAGGAGGACTGA
Upstream 100 bases:
>100_bases AACCCCGCCACCGCCGCATTCGTGAGCTGGCTGGGAAGCAAGCCGGCCAAGGCGATCTTTGCGCGCCGTGGTTTTTCGCT GAAGGATTGAGGCGCACCGT
Downstream 100 bases:
>100_bases TGCTGGATATCGATCTGCAGCTGCACCGCGGTACATTCGAGCGCCGCATCCGCATCCGGGACGACGCGCGCGTCGTGGCG CTGGTGGGCCCCTCCGGCGC
Product: molybdate ABC transporter permease protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSMFTPEELTAIGLSLKVAIVAALASLPPGIACGWLLARRRFPGKALLDALLHLPLVMPPVVTGYALLVVLGTQGPVGSW LLEHLGIQFAFRWTGAALACAVMGFPLMVRAIRLSIEATDRRLEAAAATLGAGPWRVFFSITLPLAWPGLVAGVVLAFAK ALGEFGATITFVSNIPGETQTLSSAIYGLMQVPGMESGIWRLAGVALAISLAALLLSEWLVRRPHPREED
Sequences:
>Translated_230_residues MSMFTPEELTAIGLSLKVAIVAALASLPPGIACGWLLARRRFPGKALLDALLHLPLVMPPVVTGYALLVVLGTQGPVGSW LLEHLGIQFAFRWTGAALACAVMGFPLMVRAIRLSIEATDRRLEAAAATLGAGPWRVFFSITLPLAWPGLVAGVVLAFAK ALGEFGATITFVSNIPGETQTLSSAIYGLMQVPGMESGIWRLAGVALAISLAALLLSEWLVRRPHPREED >Mature_229_residues SMFTPEELTAIGLSLKVAIVAALASLPPGIACGWLLARRRFPGKALLDALLHLPLVMPPVVTGYALLVVLGTQGPVGSWL LEHLGIQFAFRWTGAALACAVMGFPLMVRAIRLSIEATDRRLEAAAATLGAGPWRVFFSITLPLAWPGLVAGVVLAFAKA LGEFGATITFVSNIPGETQTLSSAIYGLMQVPGMESGIWRLAGVALAISLAALLLSEWLVRRPHPREED
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=225, Percent_Identity=61.3333333333333, Blast_Score=234, Evalue=3e-63, Organism=Escherichia coli, GI1788764, Length=187, Percent_Identity=37.9679144385027, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI87082099, Length=187, Percent_Identity=38.5026737967914, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787369, Length=217, Percent_Identity=29.9539170506912, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1790464, Length=217, Percent_Identity=31.7972350230415, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24389; Mature: 24258
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMFTPEELTAIGLSLKVAIVAALASLPPGIACGWLLARRRFPGKALLDALLHLPLVMPP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VVTGYALLVVLGTQGPVGSWLLEHLGIQFAFRWTGAALACAVMGFPLMVRAIRLSIEATD HHHHHHHHHEECCCCCHHHHHHHHHCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLEAAAATLGAGPWRVFFSITLPLAWPGLVAGVVLAFAKALGEFGATITFVSNIPGETQ HHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHH TLSSAIYGLMQVPGMESGIWRLAGVALAISLAALLLSEWLVRRPHPREED HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SMFTPEELTAIGLSLKVAIVAALASLPPGIACGWLLARRRFPGKALLDALLHLPLVMPP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VVTGYALLVVLGTQGPVGSWLLEHLGIQFAFRWTGAALACAVMGFPLMVRAIRLSIEATD HHHHHHHHHEECCCCCHHHHHHHHHCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLEAAAATLGAGPWRVFFSITLPLAWPGLVAGVVLAFAKALGEFGATITFVSNIPGETQ HHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHH TLSSAIYGLMQVPGMESGIWRLAGVALAISLAALLLSEWLVRRPHPREED HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]