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The map label for this gene is fimA [H]

Identifier: 21243967

GI number: 21243967

Start: 3819610

End: 3820050

Strand: Reverse

Name: fimA [H]

Synonym: XAC3241

Alternate gene names: 21243967

Gene position: 3820050-3819610 (Counterclockwise)

Preceding gene: 21243975

Following gene: 21243966

Centisome position: 73.81

GC content: 55.78

Gene sequence:

>441_bases
ATGAAGAAGCAACAGGGTTTCACGCTGATCGAACTCATGATCGTCATCGCGATCATTGCAATCTTGGCCGCCATCGCGCT
GCCCCAGTATCAGAACTATGTTGCCAAGTCGCAGGTCACTGCTGGTCTGGCCGAGCTGAGCCCGGGTAAAACGCAATACG
AAACTCTTTTGAACGAAGGCAAGGGTACGACGCTGACGACGGCCGATGCCGTGGGTTTGCAGGCTACGTCGACCACCAAT
CGCTGTTCTGCGATTACGGTGTTGGCTCCGGATGCTACCACTGGTGAGCAGACTAACGCTCTGAGCTGCACGCTGGCCGG
CAGTCCGCGTATTGTTGGTAAGAAGATCACTTGGGCTCGTGACACCAACGGCGTCTGGACCTGCTCGACTGATATCGCGA
CTGCTGATAAGGCAAAGTTCGCTCCAGCTACCTGCCAGTAA

Upstream 100 bases:

>100_bases
CACGCTTCCTGCTACAAAGACCCTGCACGTGGCACCCGCTACGCGGCGCCCAAAGGGAGTGGCCCGTGGGCGGAGACATC
AACAACTCTAGGGGATATCC

Downstream 100 bases:

>100_bases
TATTTGAACGTTTCGTTAAAAACCCCGACCTAGGTCGGGGTTTTTTTTGATCATTTCGCCGACTTTATCGTAACGGGTCC
TAGTGAATTCGCAGCTGAGG

Product: fimbrillin

Products: NA

Alternate protein names: Pilin [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKKQQGFTLIELMIVIAIIAILAAIALPQYQNYVAKSQVTAGLAELSPGKTQYETLLNEGKGTTLTTADAVGLQATSTTN
RCSAITVLAPDATTGEQTNALSCTLAGSPRIVGKKITWARDTNGVWTCSTDIATADKAKFAPATCQ

Sequences:

>Translated_146_residues
MKKQQGFTLIELMIVIAIIAILAAIALPQYQNYVAKSQVTAGLAELSPGKTQYETLLNEGKGTTLTTADAVGLQATSTTN
RCSAITVLAPDATTGEQTNALSCTLAGSPRIVGKKITWARDTNGVWTCSTDIATADKAKFAPATCQ
>Mature_146_residues
MKKQQGFTLIELMIVIAIIAILAAIALPQYQNYVAKSQVTAGLAELSPGKTQYETLLNEGKGTTLTTADAVGLQATSTTN
RCSAITVLAPDATTGEQTNALSCTLAGSPRIVGKKITWARDTNGVWTCSTDIATADKAKFAPATCQ

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

Organism=Escherichia coli, GI1786297, Length=125, Percent_Identity=37.6, Blast_Score=73, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 15280; Mature: 15280

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQQGFTLIELMIVIAIIAILAAIALPQYQNYVAKSQVTAGLAELSPGKTQYETLLNEG
CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
KGTTLTTADAVGLQATSTTNRCSAITVLAPDATTGEQTNALSCTLAGSPRIVGKKITWAR
CCCEEEECCCCCEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEECCEEEEEE
DTNGVWTCSTDIATADKAKFAPATCQ
CCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKQQGFTLIELMIVIAIIAILAAIALPQYQNYVAKSQVTAGLAELSPGKTQYETLLNEG
CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
KGTTLTTADAVGLQATSTTNRCSAITVLAPDATTGEQTNALSCTLAGSPRIVGKKITWAR
CCCEEEECCCCCEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEECCEEEEEE
DTNGVWTCSTDIATADKAKFAPATCQ
CCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7905475 [H]