| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243959
Identifier: 21243959
GI number: 21243959
Start: 3808805
End: 3809920
Strand: Direct
Name: 21243959
Synonym: XAC3233
Alternate gene names: NA
Gene position: 3808805-3809920 (Clockwise)
Preceding gene: 21243956
Following gene: 21243963
Centisome position: 73.59
GC content: 61.29
Gene sequence:
>1116_bases ATGACTCAGCACTACCTTCGGAGCGCGGCCTACCGCGATTTCTCCATCCACTCGATCTACGGCATGTCGGACGATGATAT CCATGCCATGTTCGCCCGCCTGCGCTGGAGCAGTGACTCCCACCAGGCATGCCCAGCCTGCGGTGCGTGGGCCCAGCACT ACCGGCGGCCTGCGCGCCAGCAATGGCGATGCAAGGAGTGCGGCCGGGATTTCTCGGTAACGTCGGCCACCGCCTTTTCC AGCAGGAAGAAGTCCCTGCGCAGCATTCTCCTGGCGACCTTCTACTACGTCACAGGGGTGAAGGGTTTGGCTGGCCTTGG ATTGAGCCGCATGGGTGACTATTCAAACAAGGCCGCGCACGTCGCCCTCGGAAAACTGCGAGAGGCGATCTTCCGGACCC AGGACTTCACACCGCTCACCGGCGTCGTTGAAATCGATGGCGGCTACTTCGGTGGAAAGCCTCGAAAGCCAAATCGTCGT GGACTCCGCAACGACCAGGCCATTGTCGATCGGATCGCCGGACGCCCGGCCAAACGCCCATGGCACGCCAGCGGCATGAC ACGGACGAACTGGGAGAAGCGGAAGAACAAGCGCGTAGTGATGATCTTCCGACAGCAAGGACGACCAGGCGAAGGTGCGG TGCGCAGCATTGCCGCCGTTGCCAGATCGGAGAACGACAAGGATGCCGCGAAGCTGATCGCGCGTTACGTCAGCTCCGAA GCAATCATCATGACCGACGAAAGTCCCGCCTACGCGACCGTTTCAGCGACACACACCCACTACGCTGTCAGGCATAGCCA TGAGTACGTTTCGGCCGAGGGTGTCAACGAGAACCAAGCCGAGTCGTTCTTCAGCCGGCTCAGACGCTGGGAGTATGGGG TTTCGCACGGTGTGCGGCCGGCTTACCTGGCTGACTATGCGAACGAAATGGCGTGGCGCGAGGACGTACGCCGGTTCTCG ATCAGAACACAGGTCGAAATGCTCCTGATAAAGGCCCTCACCGTGGGGCATTCGCGATGGTGGCGCGGCTACTACCAGGG GAAACGGCGCGGGACTGAGATTCTAATGAATCAGGGCATCCCGCCGTCATCGGCGTCGGGCGCGAGTGCCCAGTAA
Upstream 100 bases:
>100_bases CCCGCAGGGCGTGAACGGGAGTGGCTTGCCCGGACCCTAGCAATGCCGTGGCCGCGGAGGGCGCTGCTCGCCCTCGGCCC GGCACTTCCGGACCAATTCT
Downstream 100 bases:
>100_bases CCCTCTACGTTAGTGCGCGGGCTGTTCCGCCGGATGACCCTTCCGGCGGAACAGTGAGCCTGCAGGCATTTGCGTACCCG CAGCCTGAGCTCCGCATACT
Product: transposase
Products: NA
Alternate protein names: ISSpo3 Transposase; ISSst2 Family IS; Conserved Transposase; ISRssp2 Family IS
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MTQHYLRSAAYRDFSIHSIYGMSDDDIHAMFARLRWSSDSHQACPACGAWAQHYRRPARQQWRCKECGRDFSVTSATAFS SRKKSLRSILLATFYYVTGVKGLAGLGLSRMGDYSNKAAHVALGKLREAIFRTQDFTPLTGVVEIDGGYFGGKPRKPNRR GLRNDQAIVDRIAGRPAKRPWHASGMTRTNWEKRKNKRVVMIFRQQGRPGEGAVRSIAAVARSENDKDAAKLIARYVSSE AIIMTDESPAYATVSATHTHYAVRHSHEYVSAEGVNENQAESFFSRLRRWEYGVSHGVRPAYLADYANEMAWREDVRRFS IRTQVEMLLIKALTVGHSRWWRGYYQGKRRGTEILMNQGIPPSSASGASAQ
Sequences:
>Translated_371_residues MTQHYLRSAAYRDFSIHSIYGMSDDDIHAMFARLRWSSDSHQACPACGAWAQHYRRPARQQWRCKECGRDFSVTSATAFS SRKKSLRSILLATFYYVTGVKGLAGLGLSRMGDYSNKAAHVALGKLREAIFRTQDFTPLTGVVEIDGGYFGGKPRKPNRR GLRNDQAIVDRIAGRPAKRPWHASGMTRTNWEKRKNKRVVMIFRQQGRPGEGAVRSIAAVARSENDKDAAKLIARYVSSE AIIMTDESPAYATVSATHTHYAVRHSHEYVSAEGVNENQAESFFSRLRRWEYGVSHGVRPAYLADYANEMAWREDVRRFS IRTQVEMLLIKALTVGHSRWWRGYYQGKRRGTEILMNQGIPPSSASGASAQ >Mature_370_residues TQHYLRSAAYRDFSIHSIYGMSDDDIHAMFARLRWSSDSHQACPACGAWAQHYRRPARQQWRCKECGRDFSVTSATAFSS RKKSLRSILLATFYYVTGVKGLAGLGLSRMGDYSNKAAHVALGKLREAIFRTQDFTPLTGVVEIDGGYFGGKPRKPNRRG LRNDQAIVDRIAGRPAKRPWHASGMTRTNWEKRKNKRVVMIFRQQGRPGEGAVRSIAAVARSENDKDAAKLIARYVSSEA IIMTDESPAYATVSATHTHYAVRHSHEYVSAEGVNENQAESFFSRLRRWEYGVSHGVRPAYLADYANEMAWREDVRRFSI RTQVEMLLIKALTVGHSRWWRGYYQGKRRGTEILMNQGIPPSSASGASAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41948; Mature: 41817
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHYLRSAAYRDFSIHSIYGMSDDDIHAMFARLRWSSDSHQACPACGAWAQHYRRPARQ CCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHH QWRCKECGRDFSVTSATAFSSRKKSLRSILLATFYYVTGVKGLAGLGLSRMGDYSNKAAH HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHH VALGKLREAIFRTQDFTPLTGVVEIDGGYFGGKPRKPNRRGLRNDQAIVDRIAGRPAKRP HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC WHASGMTRTNWEKRKNKRVVMIFRQQGRPGEGAVRSIAAVARSENDKDAAKLIARYVSSE CCCCCCCCCCHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC AIIMTDESPAYATVSATHTHYAVRHSHEYVSAEGVNENQAESFFSRLRRWEYGVSHGVRP EEEEECCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH AYLADYANEMAWREDVRRFSIRTQVEMLLIKALTVGHSRWWRGYYQGKRRGTEILMNQGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHCCC PPSSASGASAQ CCCCCCCCCCC >Mature Secondary Structure TQHYLRSAAYRDFSIHSIYGMSDDDIHAMFARLRWSSDSHQACPACGAWAQHYRRPARQ CHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHH QWRCKECGRDFSVTSATAFSSRKKSLRSILLATFYYVTGVKGLAGLGLSRMGDYSNKAAH HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHH VALGKLREAIFRTQDFTPLTGVVEIDGGYFGGKPRKPNRRGLRNDQAIVDRIAGRPAKRP HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC WHASGMTRTNWEKRKNKRVVMIFRQQGRPGEGAVRSIAAVARSENDKDAAKLIARYVSSE CCCCCCCCCCHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC AIIMTDESPAYATVSATHTHYAVRHSHEYVSAEGVNENQAESFFSRLRRWEYGVSHGVRP EEEEECCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH AYLADYANEMAWREDVRRFSIRTQVEMLLIKALTVGHSRWWRGYYQGKRRGTEILMNQGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHCCC PPSSASGASAQ CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA