| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is ostB [H]
Identifier: 21243935
GI number: 21243935
Start: 3779046
End: 3779804
Strand: Direct
Name: ostB [H]
Synonym: XAC3209
Alternate gene names: 21243935
Gene position: 3779046-3779804 (Clockwise)
Preceding gene: 21243934
Following gene: 21243936
Centisome position: 73.02
GC content: 69.96
Gene sequence:
>759_bases ATGGCAGACGCGCAATCCCCCCTACCGTCGCCGCCATTGCTGGACGATGCCTGTGCATTGTTTCTGGACGTGGACGGCAC CCTCATCGACTTTGCCGACCGCCCCGAGGCGGTGCAGCTATTGCCCGACGTGCGCGAGGCCATCGGCCTGCTGAGCGAGC GCCTCAAGGGCGCCGTCGCACTGGTCAGCGGCCGGCCACTCGCCCAGCTGGATGCCCTGTTCGCTCCCTTGCTGCTGCCG GCCGCCGGTCTGCACGGGCATGAGCTGCGCAGCGATCTCGCGGCACGCGCGGCAATGCCCCAAGACACGTCCCAGTGGCT GCACGGCCTGCATCAACGCGCCGCGGCGCTGACGCACCACCACCCCGGCGTGCTGGTCGAAGACAAGGGCGCCAGCGTGG CGCTGCACTGGCGCGCCCGGCCGCAGGCCGGCCCCGAGGTGCTCGCCTTCGCGCAGCAGGAAATCGCACAGCTTTCCGGC TATCGCCTGCAGCCTGGCGACCACGTGGTGGAATTCGTTCCCGAAGGCAGCAACAAGGGTCTGGCGGTCGAGCAGCTGAT GCAGCACGGCACCTTCGCCGGTCGCACGCCGGTGTTCGTCGGCGACGACCTTACCGACGAATTCGGCTTCGACGCCGCCA ACCGGCTCGGCGGCTGGAGCGTGCTCGTCGGCGATCGCGCGCAGACCAGCGCGCGCTTTCGCGTCGGCGGCACCCCCGAC GTACACGCGTGGTTGCAACGCAACGCACGCAGCCGCTGA
Upstream 100 bases:
>100_bases CCTTCTCTCCCATGAAGGAGGACAATGCCCCAGCGGGAGAAGGAGCAATCCCCGCCGTTCCATAACCTGAATCTCACACC CCATTGCGCACACTAGCGCA
Downstream 100 bases:
>100_bases GCACAGCGCACCTGCTCTCATTCACTTCAACAGGATCGTTTGCACTCCATGACCGAGCCAAACCTGGATCTGGGCGTCAT CGGCAACTGCAGTTTCGGTG
Product: trehalose-6-phosphate phosphatase
Products: NA
Alternate protein names: TPP; Osmoregulatory trehalose synthesis protein B; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MADAQSPLPSPPLLDDACALFLDVDGTLIDFADRPEAVQLLPDVREAIGLLSERLKGAVALVSGRPLAQLDALFAPLLLP AAGLHGHELRSDLAARAAMPQDTSQWLHGLHQRAAALTHHHPGVLVEDKGASVALHWRARPQAGPEVLAFAQQEIAQLSG YRLQPGDHVVEFVPEGSNKGLAVEQLMQHGTFAGRTPVFVGDDLTDEFGFDAANRLGGWSVLVGDRAQTSARFRVGGTPD VHAWLQRNARSR
Sequences:
>Translated_252_residues MADAQSPLPSPPLLDDACALFLDVDGTLIDFADRPEAVQLLPDVREAIGLLSERLKGAVALVSGRPLAQLDALFAPLLLP AAGLHGHELRSDLAARAAMPQDTSQWLHGLHQRAAALTHHHPGVLVEDKGASVALHWRARPQAGPEVLAFAQQEIAQLSG YRLQPGDHVVEFVPEGSNKGLAVEQLMQHGTFAGRTPVFVGDDLTDEFGFDAANRLGGWSVLVGDRAQTSARFRVGGTPD VHAWLQRNARSR >Mature_251_residues ADAQSPLPSPPLLDDACALFLDVDGTLIDFADRPEAVQLLPDVREAIGLLSERLKGAVALVSGRPLAQLDALFAPLLLPA AGLHGHELRSDLAARAAMPQDTSQWLHGLHQRAAALTHHHPGVLVEDKGASVALHWRARPQAGPEVLAFAQQEIAQLSGY RLQPGDHVVEFVPEGSNKGLAVEQLMQHGTFAGRTPVFVGDDLTDEFGFDAANRLGGWSVLVGDRAQTSARFRVGGTPDV HAWLQRNARSR
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=247, Percent_Identity=40.4858299595142, Blast_Score=164, Evalue=7e-42, Organism=Drosophila melanogaster, GI221473368, Length=247, Percent_Identity=25.5060728744939, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI20129307, Length=247, Percent_Identity=25.5060728744939, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582490, Length=247, Percent_Identity=25.5060728744939, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 27030; Mature: 26899
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAQSPLPSPPLLDDACALFLDVDGTLIDFADRPEAVQLLPDVREAIGLLSERLKGAVA CCCCCCCCCCCCCHHHHHEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCEEE LVSGRPLAQLDALFAPLLLPAAGLHGHELRSDLAARAAMPQDTSQWLHGLHQRAAALTHH EECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC HPGVLVEDKGASVALHWRARPQAGPEVLAFAQQEIAQLSGYRLQPGDHVVEFVPEGSNKG CCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC LAVEQLMQHGTFAGRTPVFVGDDLTDEFGFDAANRLGGWSVLVGDRAQTSARFRVGGTPD HHHHHHHHCCCCCCCCCEEECCCCCHHHCCCHHHHCCCEEEEECCCCCCCCEEECCCCCH VHAWLQRNARSR HHHHHHHHCCCC >Mature Secondary Structure ADAQSPLPSPPLLDDACALFLDVDGTLIDFADRPEAVQLLPDVREAIGLLSERLKGAVA CCCCCCCCCCCCHHHHHEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCEEE LVSGRPLAQLDALFAPLLLPAAGLHGHELRSDLAARAAMPQDTSQWLHGLHQRAAALTHH EECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC HPGVLVEDKGASVALHWRARPQAGPEVLAFAQQEIAQLSGYRLQPGDHVVEFVPEGSNKG CCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC LAVEQLMQHGTFAGRTPVFVGDDLTDEFGFDAANRLGGWSVLVGDRAQTSARFRVGGTPD HHHHHHHHCCCCCCCCCEEECCCCCHHHCCCHHHHCCCEEEEECCCCCCCCEEECCCCCH VHAWLQRNARSR HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8045430; 9097040; 9278503 [H]