| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is bfeA [H]
Identifier: 21243892
GI number: 21243892
Start: 3719357
End: 3721744
Strand: Direct
Name: bfeA [H]
Synonym: XAC3166
Alternate gene names: 21243892
Gene position: 3719357-3721744 (Clockwise)
Preceding gene: 21243889
Following gene: 21243893
Centisome position: 71.86
GC content: 66.79
Gene sequence:
>2388_bases ATGAACACCCCCGTTTCCGCGCTTGCGACCGCCGTGGTCGCTGCACTGCTTGCCTCCCCCGCCCTGGCCCAGACCGCCGC GCCGGCGACTGCCCCGGCCAACACCCTGGATACGGTCATCGTCACCGGCACCCGCGTGTCGGACCGCACCGTGGCCGAGT CGCAGTCGCCGATCGACATCATCAGCGCCGAATCGCTGCAGGCCACCGGCACCCCGGAACTGGCCACCGCGCTGGCGCGC GCCTTGCCCTCGTTGAACTTCCCGCGCCCGGCGCTGAGCGATGGCACCAGCGCGATCCGTCCCGCGCAGCTGCGCGGCCT GTCGCCCGATCAGGTGCTGGTGCTGGTCAATGGCAAGCGCCGCCACACCTCCTCGCTGCTCAACCTCAACGGCACCATCG GTCGCGGCGCGGCGGCGGTGGATCTGAACACCATCCCGGTCGCGGCCATCGCACGGGTGGAAGTGCTGCGCGACGGCGCC TCGGCGCAATACGGCTCCGACGCCATTGCCGGTGTGGTCAACATCGTGCTCAAGGGCGCAGAAAAGGGCGGCAGCCTGCA AGCCGGCTTCGGCCAGTATTCGGCGGGCGACGGCAACAACTACGAGCTCTCCGGCGACACCGGCGTGGCCTACGGCGGCG ACCGCGGCTGGCTGCACGTCGCCGCCCAGCTCAACCAGCAGGATCCCACCGACCGCGCGCGCGCCTATGCCGGCGCGCCC AGCGTCTCGCAGCCGGCAGTCGGCCGGAAGGCGTTCAAGATTGGCGACCCGGAGGTCAATGCGCAGGCGGTCTCGGCCAA TACCGAATTCGCCTTCACCGACAGCATCACCGGCTATGCGTTTGCCACCGCCAGTAACCGCGACATCACCTCGTTCGCGT TTTTTCGCGCGCCGGGCAGCACCACGCAGAACATCTTGTCGATCTATCCGCAGGGCTTCCTGCCGGAGATCCAGACCTAC GCCAAGGATCGCTCGCTGGTGGCCGGCGTGCGCGGCTCCACCGCCAGCGGTTGGGACTGGGACGCCAGCTACAACTACGG CTACAACCGCATCGATTTCCATACCCGCAATACGCTCAACGTCAGCCTGGGCCCGACCTCGCCCACCTCGTTCTACGACG GCGCGCTGGAAACCACGCAGAACATCGTCAACCTGGACGTCAAGCGCGGTTTCGACTGGGGCCTGGCCTATCCGGTGACG GTGGCCTTCGGCGCCGAGTACCGCAACGAAAAGTGGAACCAGTCGCCGGGCGAAGCGGGCTCGTATTTCCAGGCCGGCAC GCTGGCCGGTGGCGCGCAAGGGTTCGGCGGCTTCGCTCCGAGCGTGTCGGGCCAGTACGCGCGCGACAGCTACGCGCTGT ATGCGGATCTGGAAGCCGACTTCACCGACACGTTCTCTGCCGGCCTGGCCGGGCGTTACGAGGACTACAGCGATTTCGGC AGCCAGGCCTCGGGCAAATTTTCCGCGCGCTATGCGTTCACCGACAAGATCGCGTTGCGCGGCACGGTGTCGTCGGGCTT CCGCGCGCCATCGCTGGCGCAGCAATATTTCCAGTCCACCAGCACCACGTTCCTGGCCGGCAACCCGAACCCATTCGAGA TCCGCACCTTCCCCGCCGACAGCAACGTAGCGCGCGCGCTCGGCGCCGAACCGCTGGATGCGGAAACCTCGCTGTCCTAC AGCCTGGGCCTGGTGCTGCAGCCGACCGATGCGCTCTACCTCACCGTGGATGCGTACCAGATCGATGTGGACGACCGCAT TGTGCTGTCGTCCAACCTCACCGGCACCGGCGTGCGCAGCCTGCTGGAATCGCAGGGCATCTTCGGCATCAACGGCGGGC GTTACTTCACTAATGCAGTGGACACGCGCACGCGCGGCGTGGACGTGGTGGGCAGCTACCGCTGGCAGCTGGCCGCCAGC AGCGTGGACCTGACCGCCGGCTATAACTACTCGGAAACCGAGGTGCGCAGCGTGGCCGCCAACCCGGCAGCGTTGTCGGC CAACGGGCTGAGCCTGGAGCGCATCGACCGCACCGAGCGGGGCCGCATCGAAGAAGGCTTCCCGCGCGACAAGTTCCTGA TCAACGGCAGCTGGAACCTGGAGCACTGGACGCTGGCCCTCGGGGCCACGCGCTACGGCAAGTACAGCACCCGCCCGGCA GACGCGAGCAACGACCAGACCTTCGGTGCCAAGTGGGTGGTGGATGCATCGGCCAGCTACAAGGTCGACCGTTGGACGCT GACGCTGGGCGCAGACAATGTGCTGGATGAATATCCGGACGAAAACAACTTCGCCAATTCCACCAGCGGGCAATTCCCCT ACAGCAACCTGTCGCCGTTCGGCTTCAACGGTGCGTATGTGTATGGGCGCATCAACTACCGCTGGTAA
Upstream 100 bases:
>100_bases TAGCGCCTTCAGCGTGGCCGCCATCTTCTTCGCCCTCCCGCGACCGCCGCCTGCCTAGCCTTGCCTGGTCCTGCCTGGAC CCACGTTTTTTGGAGTTGTC
Downstream 100 bases:
>100_bases GCGCTGCGCTTGAGCAGCCGGTGTCGTCCTCGTGATCGTGAGGCGGGCGATGCGATCGGCCAGCTCGCGATCAGCACGGG ACATCCGCAGCCTGCGCCGT
Product: ferric enterobactin receptor
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 795; Mature: 795
Protein sequence:
>795_residues MNTPVSALATAVVAALLASPALAQTAAPATAPANTLDTVIVTGTRVSDRTVAESQSPIDIISAESLQATGTPELATALAR ALPSLNFPRPALSDGTSAIRPAQLRGLSPDQVLVLVNGKRRHTSSLLNLNGTIGRGAAAVDLNTIPVAAIARVEVLRDGA SAQYGSDAIAGVVNIVLKGAEKGGSLQAGFGQYSAGDGNNYELSGDTGVAYGGDRGWLHVAAQLNQQDPTDRARAYAGAP SVSQPAVGRKAFKIGDPEVNAQAVSANTEFAFTDSITGYAFATASNRDITSFAFFRAPGSTTQNILSIYPQGFLPEIQTY AKDRSLVAGVRGSTASGWDWDASYNYGYNRIDFHTRNTLNVSLGPTSPTSFYDGALETTQNIVNLDVKRGFDWGLAYPVT VAFGAEYRNEKWNQSPGEAGSYFQAGTLAGGAQGFGGFAPSVSGQYARDSYALYADLEADFTDTFSAGLAGRYEDYSDFG SQASGKFSARYAFTDKIALRGTVSSGFRAPSLAQQYFQSTSTTFLAGNPNPFEIRTFPADSNVARALGAEPLDAETSLSY SLGLVLQPTDALYLTVDAYQIDVDDRIVLSSNLTGTGVRSLLESQGIFGINGGRYFTNAVDTRTRGVDVVGSYRWQLAAS SVDLTAGYNYSETEVRSVAANPAALSANGLSLERIDRTERGRIEEGFPRDKFLINGSWNLEHWTLALGATRYGKYSTRPA DASNDQTFGAKWVVDASASYKVDRWTLTLGADNVLDEYPDENNFANSTSGQFPYSNLSPFGFNGAYVYGRINYRW
Sequences:
>Translated_795_residues MNTPVSALATAVVAALLASPALAQTAAPATAPANTLDTVIVTGTRVSDRTVAESQSPIDIISAESLQATGTPELATALAR ALPSLNFPRPALSDGTSAIRPAQLRGLSPDQVLVLVNGKRRHTSSLLNLNGTIGRGAAAVDLNTIPVAAIARVEVLRDGA SAQYGSDAIAGVVNIVLKGAEKGGSLQAGFGQYSAGDGNNYELSGDTGVAYGGDRGWLHVAAQLNQQDPTDRARAYAGAP SVSQPAVGRKAFKIGDPEVNAQAVSANTEFAFTDSITGYAFATASNRDITSFAFFRAPGSTTQNILSIYPQGFLPEIQTY AKDRSLVAGVRGSTASGWDWDASYNYGYNRIDFHTRNTLNVSLGPTSPTSFYDGALETTQNIVNLDVKRGFDWGLAYPVT VAFGAEYRNEKWNQSPGEAGSYFQAGTLAGGAQGFGGFAPSVSGQYARDSYALYADLEADFTDTFSAGLAGRYEDYSDFG SQASGKFSARYAFTDKIALRGTVSSGFRAPSLAQQYFQSTSTTFLAGNPNPFEIRTFPADSNVARALGAEPLDAETSLSY SLGLVLQPTDALYLTVDAYQIDVDDRIVLSSNLTGTGVRSLLESQGIFGINGGRYFTNAVDTRTRGVDVVGSYRWQLAAS SVDLTAGYNYSETEVRSVAANPAALSANGLSLERIDRTERGRIEEGFPRDKFLINGSWNLEHWTLALGATRYGKYSTRPA DASNDQTFGAKWVVDASASYKVDRWTLTLGADNVLDEYPDENNFANSTSGQFPYSNLSPFGFNGAYVYGRINYRW >Mature_795_residues MNTPVSALATAVVAALLASPALAQTAAPATAPANTLDTVIVTGTRVSDRTVAESQSPIDIISAESLQATGTPELATALAR ALPSLNFPRPALSDGTSAIRPAQLRGLSPDQVLVLVNGKRRHTSSLLNLNGTIGRGAAAVDLNTIPVAAIARVEVLRDGA SAQYGSDAIAGVVNIVLKGAEKGGSLQAGFGQYSAGDGNNYELSGDTGVAYGGDRGWLHVAAQLNQQDPTDRARAYAGAP SVSQPAVGRKAFKIGDPEVNAQAVSANTEFAFTDSITGYAFATASNRDITSFAFFRAPGSTTQNILSIYPQGFLPEIQTY AKDRSLVAGVRGSTASGWDWDASYNYGYNRIDFHTRNTLNVSLGPTSPTSFYDGALETTQNIVNLDVKRGFDWGLAYPVT VAFGAEYRNEKWNQSPGEAGSYFQAGTLAGGAQGFGGFAPSVSGQYARDSYALYADLEADFTDTFSAGLAGRYEDYSDFG SQASGKFSARYAFTDKIALRGTVSSGFRAPSLAQQYFQSTSTTFLAGNPNPFEIRTFPADSNVARALGAEPLDAETSLSY SLGLVLQPTDALYLTVDAYQIDVDDRIVLSSNLTGTGVRSLLESQGIFGINGGRYFTNAVDTRTRGVDVVGSYRWQLAAS SVDLTAGYNYSETEVRSVAANPAALSANGLSLERIDRTERGRIEEGFPRDKFLINGSWNLEHWTLALGATRYGKYSTRPA DASNDQTFGAKWVVDASASYKVDRWTLTLGADNVLDEYPDENNFANSTSGQFPYSNLSPFGFNGAYVYGRINYRW
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=593, Percent_Identity=23.7774030354132, Blast_Score=91, Evalue=4e-19, Organism=Escherichia coli, GI1786798, Length=606, Percent_Identity=23.7623762376238, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI1790405, Length=212, Percent_Identity=32.0754716981132, Blast_Score=77, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 84578; Mature: 84578
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPVSALATAVVAALLASPALAQTAAPATAPANTLDTVIVTGTRVSDRTVAESQSPIDI CCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCEEE ISAESLQATGTPELATALARALPSLNFPRPALSDGTSAIRPAQLRGLSPDQVLVLVNGKR EECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCC RHTSSLLNLNGTIGRGAAAVDLNTIPVAAIARVEVLRDGASAQYGSDAIAGVVNIVLKGA CCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC EKGGSLQAGFGQYSAGDGNNYELSGDTGVAYGGDRGWLHVAAQLNQQDPTDRARAYAGAP CCCCCEECCCCCCCCCCCCCEEECCCCCEEECCCCCEEEEEEECCCCCCHHHHHHCCCCC SVSQPAVGRKAFKIGDPEVNAQAVSANTEFAFTDSITGYAFATASNRDITSFAFFRAPGS CCCCCCCCCEEEECCCCCCCCEEEECCCCEEEECCCCCEEEEECCCCCCEEEEEEECCCC TTQNILSIYPQGFLPEIQTYAKDRSLVAGVRGSTASGWDWDASYNYGYNRIDFHTRNTLN CHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEE VSLGPTSPTSFYDGALETTQNIVNLDVKRGFDWGLAYPVTVAFGAEYRNEKWNQSPGEAG EEECCCCCCHHCCCHHHHHHHHEEEEECCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCC SYFQAGTLAGGAQGFGGFAPSVSGQYARDSYALYADLEADFTDTFSAGLAGRYEDYSDFG CCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCHHHHC SQASGKFSARYAFTDKIALRGTVSSGFRAPSLAQQYFQSTSTTFLAGNPNPFEIRTFPAD CCCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCEEEEEECCC SNVARALGAEPLDAETSLSYSLGLVLQPTDALYLTVDAYQIDVDDRIVLSSNLTGTGVRS CHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCHHHHHH LLESQGIFGINGGRYFTNAVDTRTRGVDVVGSYRWQLAASSVDLTAGYNYSETEVRSVAA HHHHCCEEEECCCEEEECCHHCCCCCEEEEECEEEEEEECCEEEEECCCCCHHHHHHHHC NPAALSANGLSLERIDRTERGRIEEGFPRDKFLINGSWNLEHWTLALGATRYGKYSTRPA CCCEEECCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCC DASNDQTFGAKWVVDASASYKVDRWTLTLGADNVLDEYPDENNFANSTSGQFPYSNLSPF CCCCCCCCCEEEEEECCCCEEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC GFNGAYVYGRINYRW CCCCEEEEEEEEECC >Mature Secondary Structure MNTPVSALATAVVAALLASPALAQTAAPATAPANTLDTVIVTGTRVSDRTVAESQSPIDI CCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCEEE ISAESLQATGTPELATALARALPSLNFPRPALSDGTSAIRPAQLRGLSPDQVLVLVNGKR EECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCC RHTSSLLNLNGTIGRGAAAVDLNTIPVAAIARVEVLRDGASAQYGSDAIAGVVNIVLKGA CCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC EKGGSLQAGFGQYSAGDGNNYELSGDTGVAYGGDRGWLHVAAQLNQQDPTDRARAYAGAP CCCCCEECCCCCCCCCCCCCEEECCCCCEEECCCCCEEEEEEECCCCCCHHHHHHCCCCC SVSQPAVGRKAFKIGDPEVNAQAVSANTEFAFTDSITGYAFATASNRDITSFAFFRAPGS CCCCCCCCCEEEECCCCCCCCEEEECCCCEEEECCCCCEEEEECCCCCCEEEEEEECCCC TTQNILSIYPQGFLPEIQTYAKDRSLVAGVRGSTASGWDWDASYNYGYNRIDFHTRNTLN CHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEE VSLGPTSPTSFYDGALETTQNIVNLDVKRGFDWGLAYPVTVAFGAEYRNEKWNQSPGEAG EEECCCCCCHHCCCHHHHHHHHEEEEECCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCC SYFQAGTLAGGAQGFGGFAPSVSGQYARDSYALYADLEADFTDTFSAGLAGRYEDYSDFG CCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCHHHHC SQASGKFSARYAFTDKIALRGTVSSGFRAPSLAQQYFQSTSTTFLAGNPNPFEIRTFPAD CCCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCEEEEEECCC SNVARALGAEPLDAETSLSYSLGLVLQPTDALYLTVDAYQIDVDDRIVLSSNLTGTGVRS CHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCHHHHHH LLESQGIFGINGGRYFTNAVDTRTRGVDVVGSYRWQLAASSVDLTAGYNYSETEVRSVAA HHHHCCEEEECCCEEEECCHHCCCCCEEEEECEEEEEEECCEEEEECCCCCHHHHHHHHC NPAALSANGLSLERIDRTERGRIEEGFPRDKFLINGSWNLEHWTLALGATRYGKYSTRPA CCCEEECCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCC DASNDQTFGAKWVVDASASYKVDRWTLTLGADNVLDEYPDENNFANSTSGQFPYSNLSPF CCCCCCCCCEEEEEECCCCEEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC GFNGAYVYGRINYRW CCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA