| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is tolA
Identifier: 21243869
GI number: 21243869
Start: 3693831
End: 3694871
Strand: Reverse
Name: tolA
Synonym: XAC3143
Alternate gene names: NA
Gene position: 3694871-3693831 (Counterclockwise)
Preceding gene: 21243870
Following gene: 21243868
Centisome position: 71.39
GC content: 68.11
Gene sequence:
>1041_bases ATGCACGCTGACGCACTCCCCACGCAAGCGGCGCGCGATGACGGCTGGTTTCGACCGGTCGTCCTGGCATTGGTCGTGCA CGTCCTGGTCGCGCTGGTGTTTATCGCCGGCTGGCTGTGGTCGCCCGAACGCTCGGTGGAACCGGCCGCAGGCGATCCCA GCATGGAAGCTTCGCTGGACGTGTCAGCTGCCGAGGCGCGGGTTGCGCGCCAGGCACTGAAAGCCACGCCGGTCGAAACG CCGCCCCCGCCCGCGCCGTTGCCCGAACCCGCGCCGGAAGACAGCGTGCCACCGCCGCAGCCGATCCCCGAGCCGCGCCC GCAGGATGCGCCCACGCCGCAGCAGGCGCAGGCACAGGAGCGCGTCGCCCAGCCCGACAAGGTCGACCAGGAGCGCGTGG ATGCACTGGCCATTTCCGCCGAAAAGGCCAAGCAGGAACAGGAAGCCAAGCGGCGCCAGGAGCAGATCGACCTGACCGAG CGCAAACGCCAGGAAGAGGCCGAGCAGAAATTGCGCCTCGCCAAGCAGCAGGAAGAAGCCGACGCCAAGAAGAAGCAGGC GGCTGCACAGCAGGCGGCGGAAGAAGCCGAACGCCAGAAGAAGATCGCCGACATCCGTCGTCAGCGCGCGCAAGCCGATA AGGAAATGGCGCTCGCCGAGCAGAAGCTGCGCCAGGTCGCCGCCGCACGTGCGCAGCAGGCCTCTGCGGCCGCCGCGACC AGCGCGCAGCCGACCGCAGGGCAGGGCGGTACCAGCACCGACCTGTCGGCCAAGTACGCCGCGGCGATTCAACAGAAGGT GTTGGCGCAGTGGGTGCGTCCGCCGTCGGTGCCGCCAGGCCAGAAATGCACCATCAACATCCGCCAGTTGCCGGGCGGCA GCGTGATGGAGGCCAAGGTGGCGCCGGGCTGCCCCTACGACGAGGCTGGCCAGCGTTCGATCGAAGCCGCCGTACTGAGC GCCCAGCCATTGCCTTACCGCGGATTCGAATCGGTGTTTCAGCGCAACCTGACCTTTGTGTTCACTGCGCAGGATCAGTA A
Upstream 100 bases:
>100_bases GCGCCGTACCAGAAGATCATGGATGCCATCGACGTGCTCAAGCAGGCCAAGGTCGAGAAAGTGGGCCTGATTTCCGACTC CGGCGGCACCGCAGGCAGCG
Downstream 100 bases:
>100_bases CCGTCGTCGGGCTGAGGCTGCCACTGGCGCCGCAGCCTGATGCCCCCAGGTGATGCCCTCGGGGCTGTGCATGTCGCTAC ACGATCGCTCGCTCCGTTTT
Product: TolA protein
Products: NA
Alternate protein names: LA Protein; Protein lA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MHADALPTQAARDDGWFRPVVLALVVHVLVALVFIAGWLWSPERSVEPAAGDPSMEASLDVSAAEARVARQALKATPVET PPPPAPLPEPAPEDSVPPPQPIPEPRPQDAPTPQQAQAQERVAQPDKVDQERVDALAISAEKAKQEQEAKRRQEQIDLTE RKRQEEAEQKLRLAKQQEEADAKKKQAAAQQAAEEAERQKKIADIRRQRAQADKEMALAEQKLRQVAAARAQQASAAAAT SAQPTAGQGGTSTDLSAKYAAAIQQKVLAQWVRPPSVPPGQKCTINIRQLPGGSVMEAKVAPGCPYDEAGQRSIEAAVLS AQPLPYRGFESVFQRNLTFVFTAQDQ
Sequences:
>Translated_346_residues MHADALPTQAARDDGWFRPVVLALVVHVLVALVFIAGWLWSPERSVEPAAGDPSMEASLDVSAAEARVARQALKATPVET PPPPAPLPEPAPEDSVPPPQPIPEPRPQDAPTPQQAQAQERVAQPDKVDQERVDALAISAEKAKQEQEAKRRQEQIDLTE RKRQEEAEQKLRLAKQQEEADAKKKQAAAQQAAEEAERQKKIADIRRQRAQADKEMALAEQKLRQVAAARAQQASAAAAT SAQPTAGQGGTSTDLSAKYAAAIQQKVLAQWVRPPSVPPGQKCTINIRQLPGGSVMEAKVAPGCPYDEAGQRSIEAAVLS AQPLPYRGFESVFQRNLTFVFTAQDQ >Mature_346_residues MHADALPTQAARDDGWFRPVVLALVVHVLVALVFIAGWLWSPERSVEPAAGDPSMEASLDVSAAEARVARQALKATPVET PPPPAPLPEPAPEDSVPPPQPIPEPRPQDAPTPQQAQAQERVAQPDKVDQERVDALAISAEKAKQEQEAKRRQEQIDLTE RKRQEEAEQKLRLAKQQEEADAKKKQAAAQQAAEEAERQKKIADIRRQRAQADKEMALAEQKLRQVAAARAQQASAAAAT SAQPTAGQGGTSTDLSAKYAAAIQQKVLAQWVRPPSVPPGQKCTINIRQLPGGSVMEAKVAPGCPYDEAGQRSIEAAVLS AQPLPYRGFESVFQRNLTFVFTAQDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37479; Mature: 37479
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHADALPTQAARDDGWFRPVVLALVVHVLVALVFIAGWLWSPERSVEPAAGDPSMEASLD CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC VSAAEARVARQALKATPVETPPPPAPLPEPAPEDSVPPPQPIPEPRPQDAPTPQQAQAQE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RVAQPDKVDQERVDALAISAEKAKQEQEAKRRQEQIDLTERKRQEEAEQKLRLAKQQEEA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DAKKKQAAAQQAAEEAERQKKIADIRRQRAQADKEMALAEQKLRQVAAARAQQASAAAAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SAQPTAGQGGTSTDLSAKYAAAIQQKVLAQWVRPPSVPPGQKCTINIRQLPGGSVMEAKV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEECCC APGCPYDEAGQRSIEAAVLSAQPLPYRGFESVFQRNLTFVFTAQDQ CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure MHADALPTQAARDDGWFRPVVLALVVHVLVALVFIAGWLWSPERSVEPAAGDPSMEASLD CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC VSAAEARVARQALKATPVETPPPPAPLPEPAPEDSVPPPQPIPEPRPQDAPTPQQAQAQE HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RVAQPDKVDQERVDALAISAEKAKQEQEAKRRQEQIDLTERKRQEEAEQKLRLAKQQEEA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH DAKKKQAAAQQAAEEAERQKKIADIRRQRAQADKEMALAEQKLRQVAAARAQQASAAAAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SAQPTAGQGGTSTDLSAKYAAAIQQKVLAQWVRPPSVPPGQKCTINIRQLPGGSVMEAKV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEECCC APGCPYDEAGQRSIEAAVLSAQPLPYRGFESVFQRNLTFVFTAQDQ CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA