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The map label for this gene is ompP6 [H]

Identifier: 21243867

GI number: 21243867

Start: 3691750

End: 3692295

Strand: Reverse

Name: ompP6 [H]

Synonym: XAC3141

Alternate gene names: 21243867

Gene position: 3692295-3691750 (Counterclockwise)

Preceding gene: 21243868

Following gene: 21243866

Centisome position: 71.34

GC content: 63.37

Gene sequence:

>546_bases
TTGGCCCAGAGCCTCCATAGGTACCCCATGAACAAGTCCACCCGCGTCTTGCTTGTCTCCCTGCTGTCCGTTGCTGTGCT
GGCTGGTTGCTCGAAGAAGGTGAAGGAAACTCCGCCCCCTGCGACCGATACCACCGCTGGTTCCTCGGTTCCCACCGGCC
CGTCCACCTCTGGCCTGTATGGTCCGGGCGACCTGGATGCCGATGCCTGCCTGCGTCAGCGCGTTGTTTACTTCGATCTG
GATCAGGACTCCCTGAAGCCGGAATTCCAGGCCATCATGGCTTGCCACGCCAAGTACCTGCGTGACCGTCCTTCCTCGCG
CATCACCCTGCAGGGCAATGCTGACGAGCGCGGTTCGCGTGAGTACAACATGGGTCTGGGCGAGCGTCGCGGCAATGCCG
TGTCGTCCTCGCTGCAGGCTGCGGGCGGCTCGGCCAGCCAGCTGACCGTGGTCAGCTACGGCGAAGAGCGTCCGGTCTGC
ACCGAGTCGAACGAGTCCTGCTGGTCGCAGAACCGCCGCGTCGAAATCGTGTACACGGCTCAGTAA

Upstream 100 bases:

>100_bases
CCAGCGCCTGGTGCTGGCCGACGGCGATGTGAGAGAACCCGCATGGGGGCCTTACCGAACCGCGCATTAATGTTAATATT
TCGCTGCGTTAAACCACTCA

Downstream 100 bases:

>100_bases
GAAGCGATGCGCTTTCGAGTGACATCCCTGTTCGTCGCGGCGGCCCTTGTGGTCGCCGCGCCGGCATACGCCCAGCGAGC
CAGTCTCGCTGATCGTGTGG

Product: outer membrane protein P6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MAQSLHRYPMNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSSVPTGPSTSGLYGPGDLDADACLRQRVVYFDL
DQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSREYNMGLGERRGNAVSSSLQAAGGSASQLTVVSYGEERPVC
TESNESCWSQNRRVEIVYTAQ

Sequences:

>Translated_181_residues
MAQSLHRYPMNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSSVPTGPSTSGLYGPGDLDADACLRQRVVYFDL
DQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSREYNMGLGERRGNAVSSSLQAAGGSASQLTVVSYGEERPVC
TESNESCWSQNRRVEIVYTAQ
>Mature_180_residues
AQSLHRYPMNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSSVPTGPSTSGLYGPGDLDADACLRQRVVYFDLD
QDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSREYNMGLGERRGNAVSSSLQAAGGSASQLTVVSYGEERPVCT
ESNESCWSQNRRVEIVYTAQ

Specific function: Thought to play a role in bacterial envelope integrity. Very strongly associated with the peptidoglycan [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=177, Percent_Identity=36.7231638418079, Blast_Score=121, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 19549; Mature: 19418

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSLHRYPMNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSSVPTGPSTSGLY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GPGDLDADACLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSR
CCCCCCHHHHHHCCEEEEECCCHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
EYNMGLGERRGNAVSSSLQAAGGSASQLTVVSYGEERPVCTESNESCWSQNRRVEIVYTA
CCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCEEEEEEEC
Q
C
>Mature Secondary Structure 
AQSLHRYPMNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSSVPTGPSTSGLY
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GPGDLDADACLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSR
CCCCCCHHHHHHCCEEEEECCCHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
EYNMGLGERRGNAVSSSLQAAGGSASQLTVVSYGEERPVCTESNESCWSQNRRVEIVYTA
CCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCEEEEEEEC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]