| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is bla [H]
Identifier: 21243784
GI number: 21243784
Start: 3579345
End: 3580715
Strand: Direct
Name: bla [H]
Synonym: XAC3057
Alternate gene names: 21243784
Gene position: 3579345-3580715 (Clockwise)
Preceding gene: 21243781
Following gene: 21243795
Centisome position: 69.16
GC content: 67.32
Gene sequence:
>1371_bases ATGCGCACGCGCCGACGGTTCCGACCGTTGGCTATCGGGCTGTTCGGGGCGTTATTGCCCCTGGCCCTCTCATCCACCGC GCAGACACCCGCGCCCACCGCCGCTGCGTTGCAGGCGGCCACTGTGGCTCAGTCGCCCACCGCACCGCTGCCCTATCGCA CCTCGCTGCCGGCCAACCAGGTGTTGGCACCTGCTGCCGGTTTCGATGTGGCGGCATTCGAATCGATGGCCGACCAGCTG ACCTACGGCAACCGGGTGCCCGGGATGGCGATGGCCATCGTGCAGGGCGGCAAGGTGCTCAGCGCGCGCGGCTATGGCGT CACCGATGTCAATCATCCGCAGCCGGTCGATGGCCACACGGTGTTTCGCCTGGCCTCGCTTTCCAAAGCCTTCGCCGGCA CCATGGCCGGCCTGCTGGTCAACGATGGCGTGCTGCGCTGGGACAGCAAGGTGGTCGACTATGTGCCGGGCTTCCAGCTC AGCGACAACGCGGCCACCCGTCAACTCACCGTGGCCGAAGTGCTCAGCCATCGCGTCGGCCTGACCCGCAACGCCTACGA CCGCGATATCGAATCCAACGTCGACTACTACTCGCTCAGCCATAAGCTGGCGGCTGCGCCGCTGCGTTGCGCACCGGGCG ATTGCTACGCGTATCAAAACGTCGCCTTCAGCCTGGTTGGCGATGTGGTGTTCGCCGCATCGGGCAGCTTCTACGAGCAA TCGGTAGAGCGCCGCATCTTCAAGCCGCTGGGCATGAACGACGCCAGCATGGGGCTGGCCGGTATCCAGGCAAGCCCGCA CTGGGCACGTCCGCATGTGCGCAGCCGCAATGGCTGGGTCTCGCTGACGCCCAAGCCCACCTACTACCGTCTGGCGCCCG CTGCGGGCGTCAACGCCAGCGCCAGCGATATGGCGCAGTGGCTGCTCGCGCACACCGGCCATCGCACCGATGTGCTGCCT GCGCCGCTGTTGGCGACGCTGCACGCGCCGTTGATCTCCACGCCGGGCGAAATGCGTTCGGGCTGGCGCCACGAGCGCGT GGACGCGGCCAGCTATGCGCTGGGCTGGCGCGTGTTCGATTACGCCGGCCATCAAGTGGTGTTCCATGCCGGCGCGGTGC AAGGTTATCGCGGTTTGGTCGCACTGCTGCCGGAGCGCGACCTGGGTGTTGCGATCCTGTGGAACGGCGAAAGCGGCCTG CCCTCGGGCATGCTGCCGACCATCCTGGATCGCGCGCTCGGCCTGCCGGCCAAGCGCTGGCTGGACATCGACGTGGACGG CGACTTCGGCAGCGAGAACATGCTGGCAGAAAAACCCGACCCGGCTGGCAAGGGTGCGTCTTCCGGCAAGTCGGTGGCCT CGCCGCGCTGA
Upstream 100 bases:
>100_bases CAATGCGATGCCCATTCATCTTCCGGCAGTTTGTGCTATTGCAAAGCGCGGCGCTAGAATCGCCGGAGGCAGCGGAACAG GCGGGACAACCATGACAGAA
Downstream 100 bases:
>100_bases GTGGACGTCGTGCACTGACCTCGTGTCGGTGACGTCGGCAAAGGCGGCTTCGGCCGCCTTCGTTGTTTCGGTGTCTCCGA CGCGCGTTGCTCGGCTAGCG
Product: beta-lactamase
Products: A Substituted Beta- Amino Acid. [C]
Alternate protein names: FmtA-like protein [H]
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MRTRRRFRPLAIGLFGALLPLALSSTAQTPAPTAAALQAATVAQSPTAPLPYRTSLPANQVLAPAAGFDVAAFESMADQL TYGNRVPGMAMAIVQGGKVLSARGYGVTDVNHPQPVDGHTVFRLASLSKAFAGTMAGLLVNDGVLRWDSKVVDYVPGFQL SDNAATRQLTVAEVLSHRVGLTRNAYDRDIESNVDYYSLSHKLAAAPLRCAPGDCYAYQNVAFSLVGDVVFAASGSFYEQ SVERRIFKPLGMNDASMGLAGIQASPHWARPHVRSRNGWVSLTPKPTYYRLAPAAGVNASASDMAQWLLAHTGHRTDVLP APLLATLHAPLISTPGEMRSGWRHERVDAASYALGWRVFDYAGHQVVFHAGAVQGYRGLVALLPERDLGVAILWNGESGL PSGMLPTILDRALGLPAKRWLDIDVDGDFGSENMLAEKPDPAGKGASSGKSVASPR
Sequences:
>Translated_456_residues MRTRRRFRPLAIGLFGALLPLALSSTAQTPAPTAAALQAATVAQSPTAPLPYRTSLPANQVLAPAAGFDVAAFESMADQL TYGNRVPGMAMAIVQGGKVLSARGYGVTDVNHPQPVDGHTVFRLASLSKAFAGTMAGLLVNDGVLRWDSKVVDYVPGFQL SDNAATRQLTVAEVLSHRVGLTRNAYDRDIESNVDYYSLSHKLAAAPLRCAPGDCYAYQNVAFSLVGDVVFAASGSFYEQ SVERRIFKPLGMNDASMGLAGIQASPHWARPHVRSRNGWVSLTPKPTYYRLAPAAGVNASASDMAQWLLAHTGHRTDVLP APLLATLHAPLISTPGEMRSGWRHERVDAASYALGWRVFDYAGHQVVFHAGAVQGYRGLVALLPERDLGVAILWNGESGL PSGMLPTILDRALGLPAKRWLDIDVDGDFGSENMLAEKPDPAGKGASSGKSVASPR >Mature_456_residues MRTRRRFRPLAIGLFGALLPLALSSTAQTPAPTAAALQAATVAQSPTAPLPYRTSLPANQVLAPAAGFDVAAFESMADQL TYGNRVPGMAMAIVQGGKVLSARGYGVTDVNHPQPVDGHTVFRLASLSKAFAGTMAGLLVNDGVLRWDSKVVDYVPGFQL SDNAATRQLTVAEVLSHRVGLTRNAYDRDIESNVDYYSLSHKLAAAPLRCAPGDCYAYQNVAFSLVGDVVFAASGSFYEQ SVERRIFKPLGMNDASMGLAGIQASPHWARPHVRSRNGWVSLTPKPTYYRLAPAAGVNASASDMAQWLLAHTGHRTDVLP APLLATLHAPLISTPGEMRSGWRHERVDAASYALGWRVFDYAGHQVVFHAGAVQGYRGLVALLPERDLGVAILWNGESGL PSGMLPTILDRALGLPAKRWLDIDVDGDFGSENMLAEKPDPAGKGASSGKSVASPR
Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790593, Length=384, Percent_Identity=22.3958333333333, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1786574, Length=255, Percent_Identity=25.8823529411765, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87082101, Length=334, Percent_Identity=22.1556886227545, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17550934, Length=279, Percent_Identity=25.089605734767, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115533026, Length=350, Percent_Identity=23.1428571428571, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: 3.5.2.6 [C]
Molecular weight: Translated: 48591; Mature: 48591
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRRRFRPLAIGLFGALLPLALSSTAQTPAPTAAALQAATVAQSPTAPLPYRTSLPANQ CCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHH VLAPAAGFDVAAFESMADQLTYGNRVPGMAMAIVQGGKVLSARGYGVTDVNHPQPVDGHT HCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCHH VFRLASLSKAFAGTMAGLLVNDGVLRWDSKVVDYVPGFQLSDNAATRQLTVAEVLSHRVG HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCEECCCCCHHHHHHHHHHHHHCC LTRNAYDRDIESNVDYYSLSHKLAAAPLRCAPGDCYAYQNVAFSLVGDVVFAASGSFYEQ CCCCCCCCCHHCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH SVERRIFKPLGMNDASMGLAGIQASPHWARPHVRSRNGWVSLTPKPTYYRLAPAAGVNAS HHHHHHHHCCCCCCHHCCEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCC ASDMAQWLLAHTGHRTDVLPAPLLATLHAPLISTPGEMRSGWRHERVDAASYALGWRVFD HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHEEEEE YAGHQVVFHAGAVQGYRGLVALLPERDLGVAILWNGESGLPSGMLPTILDRALGLPAKRW CCCCEEEEECCCHHCCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHE LDIDVDGDFGSENMLAEKPDPAGKGASSGKSVASPR EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTRRRFRPLAIGLFGALLPLALSSTAQTPAPTAAALQAATVAQSPTAPLPYRTSLPANQ CCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHH VLAPAAGFDVAAFESMADQLTYGNRVPGMAMAIVQGGKVLSARGYGVTDVNHPQPVDGHT HCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCHH VFRLASLSKAFAGTMAGLLVNDGVLRWDSKVVDYVPGFQLSDNAATRQLTVAEVLSHRVG HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCEECCCCCHHHHHHHHHHHHHCC LTRNAYDRDIESNVDYYSLSHKLAAAPLRCAPGDCYAYQNVAFSLVGDVVFAASGSFYEQ CCCCCCCCCHHCCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH SVERRIFKPLGMNDASMGLAGIQASPHWARPHVRSRNGWVSLTPKPTYYRLAPAAGVNAS HHHHHHHHCCCCCCHHCCEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCC ASDMAQWLLAHTGHRTDVLPAPLLATLHAPLISTPGEMRSGWRHERVDAASYALGWRVFD HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHEEEEE YAGHQVVFHAGAVQGYRGLVALLPERDLGVAILWNGESGLPSGMLPTILDRALGLPAKRW CCCCEEEEECCCHHCCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHE LDIDVDGDFGSENMLAEKPDPAGKGASSGKSVASPR EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Beta-Lactam; H2O [C]
Specific reaction: A Beta-Lactam + H2O = A Substituted Beta- Amino Acid. [C]
General reaction: Carboxylic acid amide hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA