| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is aroK
Identifier: 21243737
GI number: 21243737
Start: 3520536
End: 3521078
Strand: Direct
Name: aroK
Synonym: XAC3010
Alternate gene names: 21243737
Gene position: 3520536-3521078 (Clockwise)
Preceding gene: 21243728
Following gene: 21243738
Centisome position: 68.02
GC content: 65.93
Gene sequence:
>543_bases ATGAACCCCGCACCCAATCTCGTGATGGTCGGCCCGATGGGCGCCGGAAAAAGCTGCATCGGCCGTCGCCTGGCCGAGCG CTTCGGGCTGGAATTCGTCGATGTGGACCAGGCCATCGTCGAACAGGTGGGCAGCAGCATCCCGGCCATCTTCGAGCAGC ATGGCGAAGCCAGGTTTCGGCAGCACGAGGCGGAAACCCTGCAGGCGCTGCTGGAACAGGACAACAAACTGATTTCCACC GGTGGCGGCGCAGTGCTGGATCCGCGCAACCGCGAGCGCATCTGCGCGCGTGGGTTCGTGGTGTACCTGCATGTCAGTGT GCCGGCGCAATTGACACGCCTGGCGCGCGACCGCAATCGCCCGCTGCTGCAACGCGCCGACCGCGAGCAGGTGCTGCATG CGATGGCCGCGCACCGCACGCCGCTGTACCACCAGGTCGCAGATCTCAGCCTGGAAACCGATCATCTTTCCCCCGCCGAA GCCACAGCGCAGCTGGTGCTGCGCCTGGCCGCGCAATGGCGCATGTCGAGTAACCCCGCATGA
Upstream 100 bases:
>100_bases ATCGAATCGCCGGATCGGCACGCGGTTGGCGTGGTTGAGGACAGCCATTGCGCCGTGCCATCGGCCCGGCCCGATGGCGT GAATGCTACGATCCCTGCGC
Downstream 100 bases:
>100_bases CACTTTCCCGTTCTTCGCGCAGCGTCGATGTCGACGGTGCGCAGCCTTACACCATCACCATCGCCCCGGGCCTGCTGGCC GACGGTGCGCGCCTGGCCAG
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MNPAPNLVMVGPMGAGKSCIGRRLAERFGLEFVDVDQAIVEQVGSSIPAIFEQHGEARFRQHEAETLQALLEQDNKLIST GGGAVLDPRNRERICARGFVVYLHVSVPAQLTRLARDRNRPLLQRADREQVLHAMAAHRTPLYHQVADLSLETDHLSPAE ATAQLVLRLAAQWRMSSNPA
Sequences:
>Translated_180_residues MNPAPNLVMVGPMGAGKSCIGRRLAERFGLEFVDVDQAIVEQVGSSIPAIFEQHGEARFRQHEAETLQALLEQDNKLIST GGGAVLDPRNRERICARGFVVYLHVSVPAQLTRLARDRNRPLLQRADREQVLHAMAAHRTPLYHQVADLSLETDHLSPAE ATAQLVLRLAAQWRMSSNPA >Mature_180_residues MNPAPNLVMVGPMGAGKSCIGRRLAERFGLEFVDVDQAIVEQVGSSIPAIFEQHGEARFRQHEAETLQALLEQDNKLIST GGGAVLDPRNRERICARGFVVYLHVSVPAQLTRLARDRNRPLLQRADREQVLHAMAAHRTPLYHQVADLSLETDHLSPAE ATAQLVLRLAAQWRMSSNPA
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=167, Percent_Identity=40.7185628742515, Blast_Score=139, Evalue=1e-34, Organism=Escherichia coli, GI1786587, Length=162, Percent_Identity=29.6296296296296, Blast_Score=74, Evalue=5e-15,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_XANAC (Q8PI88)
Other databases:
- EMBL: AE008923 - RefSeq: NP_643319.1 - ProteinModelPortal: Q8PI88 - SMR: Q8PI88 - GeneID: 1157081 - GenomeReviews: AE008923_GR - KEGG: xac:XAC3010 - NMPDR: fig|190486.1.peg.2963 - HOGENOM: HBG335815 - OMA: VIYLRAN - ProtClustDB: PRK00131 - BioCyc: XAXO190486:XAC3010-MONOMER - BRENDA: 2.7.1.71 - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 19916; Mature: 19916
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 36-36 BINDING 60-60 BINDING 82-82 BINDING 120-120 BINDING 139-139
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPAPNLVMVGPMGAGKSCIGRRLAERFGLEFVDVDQAIVEQVGSSIPAIFEQHGEARFR CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHH QHEAETLQALLEQDNKLISTGGGAVLDPRNRERICARGFVVYLHVSVPAQLTRLARDRNR HHHHHHHHHHHHCCCCEEECCCCCEECCCCHHHHHHCCEEEEEEECCHHHHHHHHHHCCC PLLQRADREQVLHAMAAHRTPLYHQVADLSLETDHLSPAEATAQLVLRLAAQWRMSSNPA HHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNPAPNLVMVGPMGAGKSCIGRRLAERFGLEFVDVDQAIVEQVGSSIPAIFEQHGEARFR CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHH QHEAETLQALLEQDNKLISTGGGAVLDPRNRERICARGFVVYLHVSVPAQLTRLARDRNR HHHHHHHHHHHHCCCCEEECCCCCEECCCCHHHHHHCCEEEEEEECCHHHHHHHHHHCCC PLLQRADREQVLHAMAAHRTPLYHQVADLSLETDHLSPAEATAQLVLRLAAQWRMSSNPA HHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217