| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243708
Identifier: 21243708
GI number: 21243708
Start: 3483239
End: 3484036
Strand: Direct
Name: 21243708
Synonym: XAC2981
Alternate gene names: NA
Gene position: 3483239-3484036 (Clockwise)
Preceding gene: 21243707
Following gene: 21243716
Centisome position: 67.3
GC content: 65.16
Gene sequence:
>798_bases GTGATTCGTCGTTGTCTTGTTGTCATTGCCTTTGCGCTATTGCTGGCCGGCTGTTCCAGCATGACTGAGCGCCACCACGA CGAACGCCGCGGCCACTTCGTCACCCGCACGTTGAAACTGGAAGGGCGCCTGTACCGCTATCAAGTGTTCGTGCCCGCGT CCAAGGTGCCGCAGCCGCGGCCCATCGTGCTGTTCCTGCATGGCTCGGGCGAGCGCGGCGATAACGGGCGCGACCAGGCC GAAGTCGGTGTGGGCCCGTACTTGAGCGAACACACCGCCGACTTCCCCGCACTTGTCGTGCTGCCGCAAGTGCCCGAGGA CGAGGAGTGGATGGGCATCAATGCGCGCATGGCGATCGCAGCGCTGGACGCGGCCAGCGCCGAGTTCGGTGCCGACCCGC AGCGCACCTACCTCACCGGCATTTCGATGGGTGGCTATGGCGCCTGGGAAATCGGGCTGATGCAGCCGCAGCGGTTTGCG GCGATCGTGCCGATCTGCGGCGCGCTCAAGGCACCGCGCGATGAGCGCCGCACCTTGTACGTGAGCCTGGTGGCGAAGGA AGCGGACCCGTACACCGCGGCAGTGACGCAACTCAAGCACGTGCCGATCTGGATGTTCCATGGCGCCAAGGACGATTCGG TGCCGCCGCACGACGACCGCGCGCTGTACCGCGCCGCGAAGGGCGTCGGTGCCAATGTACGTTACAGCGAATATCCGCAG GGCAATCACAATGCCTGGGACGCAACCTATGCGGACCCGGCGATGTGGGAATGGATGTTCAAGCAGCGCCTGCGCTGA
Upstream 100 bases:
>100_bases GACAAGCAGATGAATATTCGACCGGAATCGCCGCGCATCGACACGCCAGCGCACCGGCATGCGGTAATACTGCACCCATG TGATCGGTCGGGAGAGCTGC
Downstream 100 bases:
>100_bases CGGTGTGCAGCGCCACGCCGGCACTGCGCCCGCGTGCCGGCATGACACGGCCAATGCGCCTTAGAGCGGCTGACAAAACG TAGCGAGCAGTCGTCAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase-Like Protein; Esterase; Dienelactone Hydrolase; Peptidase; A Hydrolase; PA14 Domain Protein; Carbohydrate Esterase Family 1 Domain Protein; Phospholipase/Carboxylesterase Family; Alpha/Beta Fold Hydrolase; Phospholipase/Carboxylesterase Protein; Phospholipase/Carboxylesterase Superfamily; Lipoprotein; Esterase PHB Depolymerase
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MIRRCLVVIAFALLLAGCSSMTERHHDERRGHFVTRTLKLEGRLYRYQVFVPASKVPQPRPIVLFLHGSGERGDNGRDQA EVGVGPYLSEHTADFPALVVLPQVPEDEEWMGINARMAIAALDAASAEFGADPQRTYLTGISMGGYGAWEIGLMQPQRFA AIVPICGALKAPRDERRTLYVSLVAKEADPYTAAVTQLKHVPIWMFHGAKDDSVPPHDDRALYRAAKGVGANVRYSEYPQ GNHNAWDATYADPAMWEWMFKQRLR
Sequences:
>Translated_265_residues MIRRCLVVIAFALLLAGCSSMTERHHDERRGHFVTRTLKLEGRLYRYQVFVPASKVPQPRPIVLFLHGSGERGDNGRDQA EVGVGPYLSEHTADFPALVVLPQVPEDEEWMGINARMAIAALDAASAEFGADPQRTYLTGISMGGYGAWEIGLMQPQRFA AIVPICGALKAPRDERRTLYVSLVAKEADPYTAAVTQLKHVPIWMFHGAKDDSVPPHDDRALYRAAKGVGANVRYSEYPQ GNHNAWDATYADPAMWEWMFKQRLR >Mature_265_residues MIRRCLVVIAFALLLAGCSSMTERHHDERRGHFVTRTLKLEGRLYRYQVFVPASKVPQPRPIVLFLHGSGERGDNGRDQA EVGVGPYLSEHTADFPALVVLPQVPEDEEWMGINARMAIAALDAASAEFGADPQRTYLTGISMGGYGAWEIGLMQPQRFA AIVPICGALKAPRDERRTLYVSLVAKEADPYTAAVTQLKHVPIWMFHGAKDDSVPPHDDRALYRAAKGVGANVRYSEYPQ GNHNAWDATYADPAMWEWMFKQRLR
Specific function: Unknown
COG id: COG4099
COG function: function code R; Predicted peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29620; Mature: 29620
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRCLVVIAFALLLAGCSSMTERHHDERRGHFVTRTLKLEGRLYRYQVFVPASKVPQPR CHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEEEEEECCEEEEEEEEECCCCCCCCC PIVLFLHGSGERGDNGRDQAEVGVGPYLSEHTADFPALVVLPQVPEDEEWMGINARMAIA CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCEEEEE ALDAASAEFGADPQRTYLTGISMGGYGAWEIGLMQPQRFAAIVPICGALKAPRDERRTLY EECCCCHHCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEE VSLVAKEADPYTAAVTQLKHVPIWMFHGAKDDSVPPHDDRALYRAAKGVGANVRYSEYPQ EEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCC GNHNAWDATYADPAMWEWMFKQRLR CCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MIRRCLVVIAFALLLAGCSSMTERHHDERRGHFVTRTLKLEGRLYRYQVFVPASKVPQPR CHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEEEEEECCEEEEEEEEECCCCCCCCC PIVLFLHGSGERGDNGRDQAEVGVGPYLSEHTADFPALVVLPQVPEDEEWMGINARMAIA CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCEEEEE ALDAASAEFGADPQRTYLTGISMGGYGAWEIGLMQPQRFAAIVPICGALKAPRDERRTLY EECCCCHHCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEE VSLVAKEADPYTAAVTQLKHVPIWMFHGAKDDSVPPHDDRALYRAAKGVGANVRYSEYPQ EEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCC GNHNAWDATYADPAMWEWMFKQRLR CCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA