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The map label for this gene is perM [C]

Identifier: 21243684

GI number: 21243684

Start: 3462255

End: 3463421

Strand: Reverse

Name: perM [C]

Synonym: XAC2957

Alternate gene names: 21243684

Gene position: 3463421-3462255 (Counterclockwise)

Preceding gene: 21243685

Following gene: 21243683

Centisome position: 66.92

GC content: 63.15

Gene sequence:

>1167_bases
ATGACTTTGACTCCCGAAGCCGAAATTGCCCTGTTCCTGCGTCGCCTCAAATGGGCGGCGGTGATTGTCGGTGTGTTGTG
GGTGGTCTCGCTGCTGGCGCCGATCTTGACCCCGTTCGTGCTGGCGCTGTTGCTGGCATGGCTGGGCGACCCGCTGGTGG
ACCGCATCGAACGCGCCGGACGCTCGCGCAATGTCGCAGTGGTGCTGGTGTTCGTGCTGGCAACGCTGCTGTTCGTGCTG
GCGCTGATGATTCTGGTGCCGATGATCGAGCGCCAGATCATGACCTTGATCGATGCGCTGCCGCAGATGCGCAACTGGGC
GATCGGCACCGCCATTCCATGGCTGGAAGCCAAGACCGGCATGCAGCTGATGGCCTGGCTGGACCCGGAGCGCTTGATCG
ACTGGATCCGCAGCCACTGGGAACAGGCCGGTGGCGCCGCCAAGACGCTCTTCGGCTACGTGTCGCGTTCGGGCTTTGCA
ATGGTGACCTGGGTGATCAACCTGGCGCTGCTGCCGATCCTGGCGTTCTACTTCCTGCGTGACTGGGATCGTTTGGTCGA
GCGTGTGGCTGCCGTCATCCCGCGTGCTTACATCGGCACCGCAAGCCGGCTGGCACAGGAATCCAACGACGTGCTCGGTG
GCTTCATCCGCGGCCAGTTCCTGGTGATGCTGGCGCTGGGTGCGATCTACGCCACCGGTATGTCCATCATCGGGCTCAAT
CTAGGCTTGTTGATCGGCATCATCGCCGGCTTGATCAGTTTCATCCCGTACCTGGGCGCGACTACCGGCATCGTGCTCGC
ATTGCTGGCGGCCATCGTGCAGGCGCAAGGGCTGGATCTGAAATTGCTGATCGGCGTAGGTGTCGTGTTCACGGTGGGCC
AGTTGCTGGAAAGCTACGTGCTCACTCCGCGCATCGTCGGCGACAAGATCGGCCTGCATCCGGTGGCGGTGATCTTCGCG
GTGATGGCCGGCGGCCAGTTGTTCGGCTTCCTCGGCATGTTGCTGGCATTGCCTGTCGCGGCGGTGGCCAACGTGCTGTT
GCGCTATGCGCATGAGCAGTACACGCGCAGCGATCTGTATGCGGGCGAGCGCGCCGGCATCGTGCTGCGGTCCACGCCCG
AGCGCAGCGTGATCATCGACCCCAGCAAGGATGCAGATCGGTTGTGA

Upstream 100 bases:

>100_bases
TCAACCGTATGCTCGGCGACAACAGCCCGCTGGTCTCGGTCTCGGTACCGACCGAGGGCCCGATCATTCTCGAAAACGAG
CACGCCGAGTACCGCCTGAA

Downstream 100 bases:

>100_bases
GTGTTCCGCAGTTGCCGCTGGCGTTGCGCGCGCCACCCGATCAGCGTTTCGACAGTTACATCGCCGCGCCCGACGGCCTG
CTTGCGCAATTGCAGGCGCT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTLTPEAEIALFLRRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERAGRSRNVAVVLVFVLATLLFVL
ALMILVPMIERQIMTLIDALPQMRNWAIGTAIPWLEAKTGMQLMAWLDPERLIDWIRSHWEQAGGAAKTLFGYVSRSGFA
MVTWVINLALLPILAFYFLRDWDRLVERVAAVIPRAYIGTASRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLN
LGLLIGIIAGLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVIFA
VMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSDLYAGERAGIVLRSTPERSVIIDPSKDADRL

Sequences:

>Translated_388_residues
MTLTPEAEIALFLRRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERAGRSRNVAVVLVFVLATLLFVL
ALMILVPMIERQIMTLIDALPQMRNWAIGTAIPWLEAKTGMQLMAWLDPERLIDWIRSHWEQAGGAAKTLFGYVSRSGFA
MVTWVINLALLPILAFYFLRDWDRLVERVAAVIPRAYIGTASRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLN
LGLLIGIIAGLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVIFA
VMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSDLYAGERAGIVLRSTPERSVIIDPSKDADRL
>Mature_387_residues
TLTPEAEIALFLRRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERAGRSRNVAVVLVFVLATLLFVLA
LMILVPMIERQIMTLIDALPQMRNWAIGTAIPWLEAKTGMQLMAWLDPERLIDWIRSHWEQAGGAAKTLFGYVSRSGFAM
VTWVINLALLPILAFYFLRDWDRLVERVAAVIPRAYIGTASRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNL
GLLIGIIAGLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVIFAV
MAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSDLYAGERAGIVLRSTPERSVIIDPSKDADRL

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=322, Percent_Identity=27.9503105590062, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42242; Mature: 42111

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTPEAEIALFLRRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
RSRNVAVVLVFVLATLLFVLALMILVPMIERQIMTLIDALPQMRNWAIGTAIPWLEAKTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHCC
MQLMAWLDPERLIDWIRSHWEQAGGAAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLR
HHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DWDRLVERVAAVIPRAYIGTASRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLLIGIIAGLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LTPRIVGDKIGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSDLY
CCCHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGERAGIVLRSTPERSVIIDPSKDADRL
CCCCCCEEEECCCCCCEEECCCCCCCCC
>Mature Secondary Structure 
TLTPEAEIALFLRRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
RSRNVAVVLVFVLATLLFVLALMILVPMIERQIMTLIDALPQMRNWAIGTAIPWLEAKTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHCC
MQLMAWLDPERLIDWIRSHWEQAGGAAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLR
HHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DWDRLVERVAAVIPRAYIGTASRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLLIGIIAGLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLIGVGVVFTVGQLLESYV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LTPRIVGDKIGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSDLY
CCCHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGERAGIVLRSTPERSVIIDPSKDADRL
CCCCCCEEEECCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]