Click here to switch to the map view.

The map label for this gene is yagQ [H]

Identifier: 21243619

GI number: 21243619

Start: 3391501

End: 3391842

Strand: Reverse

Name: yagQ [H]

Synonym: XAC2892

Alternate gene names: 21243619

Gene position: 3391842-3391501 (Counterclockwise)

Preceding gene: 21243620

Following gene: 77748679

Centisome position: 65.54

GC content: 69.01

Gene sequence:

>342_bases
TTGCTCGACGATTTGCTGCCAACGCTGAGCGCATGGCAGCGCGCCGGGCAGCGCGTGGCGATGGCGACCTTGATCGATGT
GCAAGGCTCCTCACCCCGCCCGTTGGGGAGCGAGATGGCCATCAGCGCCGACGGGCGCGTGGCAGGCTATGTCTCAGGCG
GCTGCGTCGAAGCGGCGGTGGCGCATGAAGCCATGGCAGCGCTGCGCGATGGTCAGCCGCGCTGGCTGGACTATGGCGAA
GGCAGCCAAGTGCTGGACATCCAGCTCAGCTGCGGGGGGGCGCATCGGCGTGCTGGTGTGGCCGGTGCCGGATCTGGGCG
AGCACCTCGCGCGTTGGCGTAA

Upstream 100 bases:

>100_bases
AACTGCTGCCGCACCTGCCCGAGATGCTGCGCGCGTGAGCGCGCTCGTTGCCCCCGTCACGCATGCGCCGCCGGCGTGGC
CGGCATGGCCGGGCTACGCG

Downstream 100 bases:

>100_bases
CGCGCGCCAGCATCGGCGCGCATTTCATGTGGCCTTGGATCGTGCCTCCGGCATGGTGCGTTACCTAGCACATGCACAGG
ACGCGCGTGCGGGCGAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MLDDLLPTLSAWQRAGQRVAMATLIDVQGSSPRPLGSEMAISADGRVAGYVSGGCVEAAVAHEAMAALRDGQPRWLDYGE
GSQVLDIQLSCGGAHRRAGVAGAGSGRAPRALA

Sequences:

>Translated_113_residues
MLDDLLPTLSAWQRAGQRVAMATLIDVQGSSPRPLGSEMAISADGRVAGYVSGGCVEAAVAHEAMAALRDGQPRWLDYGE
GSQVLDIQLSCGGAHRRAGVAGAGSGRAPRALA
>Mature_113_residues
MLDDLLPTLSAWQRAGQRVAMATLIDVQGSSPRPLGSEMAISADGRVAGYVSGGCVEAAVAHEAMAALRDGQPRWLDYGE
GSQVLDIQLSCGGAHRRAGVAGAGSGRAPRALA

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786477, Length=79, Percent_Identity=48.1012658227848, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 11558; Mature: 11558

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDDLLPTLSAWQRAGQRVAMATLIDVQGSSPRPLGSEMAISADGRVAGYVSGGCVEAAV
CCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHH
AHEAMAALRDGQPRWLDYGEGSQVLDIQLSCGGAHRRAGVAGAGSGRAPRALA
HHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDDLLPTLSAWQRAGQRVAMATLIDVQGSSPRPLGSEMAISADGRVAGYVSGGCVEAAV
CCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHH
AHEAMAALRDGQPRWLDYGEGSQVLDIQLSCGGAHRRAGVAGAGSGRAPRALA
HHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]