| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243588
Identifier: 21243588
GI number: 21243588
Start: 3357165
End: 3358418
Strand: Reverse
Name: 21243588
Synonym: XAC2861
Alternate gene names: NA
Gene position: 3358418-3357165 (Counterclockwise)
Preceding gene: 21243589
Following gene: 21243587
Centisome position: 64.89
GC content: 63.32
Gene sequence:
>1254_bases TTGATCGACAAGGATGTATCGACCAATCGGCTCTACCTTCCAGTAGAGGGCGACCTGGCTGATAAGCTTGAAACCTCGCC ACACCGGGGGAGAACGAGAAGTTCTTATACGGATGGAATTAACGACACCCTGAACGATATCCTTGACTCCCCAGACGGCG ACGCCGCCATGCGCAATGACGCTGCTGCTTTGAAGCGCGTCGCCGCCCAAGTCCACGACCTGCAGGATACCCTCAAAGTC GCCCTGATCAATGGCGATATGTTCGCTACGACTCCGGATCGCTTGACCAAGGCGGAGGCCAACGCGCAAAACCGCAGCAC GCTCTCCGAGTACGAGCAATACCGCACCACTCACGCCGACCAGCTGAAGACGCTGCGCGCCATGAGCAACGTCGAATCCG AATGGTTCGCCATCACCCACTCCGAGCAGCGCATCGTCAAGGTGATCGATGACGCACGCACGACCGGCAAAAATCTGGTC GCCGTCCCAGGCGAGCCCGATGCCATTACCCGAGAAATCGCCGGTCGCGAAGAGTTCCGCATGGCCATCGCGCACGCCGA AGACGCCGGGCGTGTGCGGTTATCCGAGTCCAATGCGGCCTTGGTCAAGCAAGTATTGGATGACACGCCGACGAACATAG GCAGCGCTGCGCGCGGCATTCGCCAAAGCGTAGCCACCATCCCGCATCCGTCGTATACCCCGCTGTCGCAACGCGGCTTC ACCACCGCCGAGCTACTTGCCGGCGATCTTTCCGCAGGCCAAGCGCTACGCACTGCCGGCCTACTCGCCACCGCCGCCGA CACGGTGATGACCGGCCAGCGCGCCACACACTTACTCGGCCAAGACAATCCGCTGGCCGCGCAATCGGAGCTTGCGCACT TCGCCGGCCGCAATGTCGGTGGCTGGGCCGGCGGTACCGCAGCTGCCTACGCGCTGGGCAGCTCGGGCGCCGGGCCGATG GTGCTGATCGCAGCCGATGCGTATTTCTTGAGTACCGCTGGCGAGAAGGCCGCCGCGTTGCTCGACAACCGCGCCATCTA CACCCAGACCGATCGCGCCGGCACCCAGTGGTCGTTCAACGGCACCGCCTGGGCGCGCGAGGGCAAGGCCGACACCACCA ACGACGGGGTAGACAACCCCACAGCCATGCCCATCGTCGCCAGCTACGAGAAGGCACGCGAACTCAATTACCAGGCCACC AATGCCGCTGCAGCGCTCGCCCTCAAAGATGCGCCCGCTCCGCAGGATCCGTAG
Upstream 100 bases:
>100_bases GCATATGCCGACCAGCAATGTCATTCTTCAAAGTCACCACGTCATTGAAAACAGTACTTTTCTCAGAAATCGGCTTCTTA ATAAATTGGTCGAGCATGGC
Downstream 100 bases:
>100_bases TCTCCGCAGGACATACAGGGCGAGCAGACGCTCTACCGCTATCGCATCGTCGGCACCGAGTTGCAGCCGCAGTGGCGTGA AGCGATCGAACTGGCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MIDKDVSTNRLYLPVEGDLADKLETSPHRGRTRSSYTDGINDTLNDILDSPDGDAAMRNDAAALKRVAAQVHDLQDTLKV ALINGDMFATTPDRLTKAEANAQNRSTLSEYEQYRTTHADQLKTLRAMSNVESEWFAITHSEQRIVKVIDDARTTGKNLV AVPGEPDAITREIAGREEFRMAIAHAEDAGRVRLSESNAALVKQVLDDTPTNIGSAARGIRQSVATIPHPSYTPLSQRGF TTAELLAGDLSAGQALRTAGLLATAADTVMTGQRATHLLGQDNPLAAQSELAHFAGRNVGGWAGGTAAAYALGSSGAGPM VLIAADAYFLSTAGEKAAALLDNRAIYTQTDRAGTQWSFNGTAWAREGKADTTNDGVDNPTAMPIVASYEKARELNYQAT NAAAALALKDAPAPQDP
Sequences:
>Translated_417_residues MIDKDVSTNRLYLPVEGDLADKLETSPHRGRTRSSYTDGINDTLNDILDSPDGDAAMRNDAAALKRVAAQVHDLQDTLKV ALINGDMFATTPDRLTKAEANAQNRSTLSEYEQYRTTHADQLKTLRAMSNVESEWFAITHSEQRIVKVIDDARTTGKNLV AVPGEPDAITREIAGREEFRMAIAHAEDAGRVRLSESNAALVKQVLDDTPTNIGSAARGIRQSVATIPHPSYTPLSQRGF TTAELLAGDLSAGQALRTAGLLATAADTVMTGQRATHLLGQDNPLAAQSELAHFAGRNVGGWAGGTAAAYALGSSGAGPM VLIAADAYFLSTAGEKAAALLDNRAIYTQTDRAGTQWSFNGTAWAREGKADTTNDGVDNPTAMPIVASYEKARELNYQAT NAAAALALKDAPAPQDP >Mature_417_residues MIDKDVSTNRLYLPVEGDLADKLETSPHRGRTRSSYTDGINDTLNDILDSPDGDAAMRNDAAALKRVAAQVHDLQDTLKV ALINGDMFATTPDRLTKAEANAQNRSTLSEYEQYRTTHADQLKTLRAMSNVESEWFAITHSEQRIVKVIDDARTTGKNLV AVPGEPDAITREIAGREEFRMAIAHAEDAGRVRLSESNAALVKQVLDDTPTNIGSAARGIRQSVATIPHPSYTPLSQRGF TTAELLAGDLSAGQALRTAGLLATAADTVMTGQRATHLLGQDNPLAAQSELAHFAGRNVGGWAGGTAAAYALGSSGAGPM VLIAADAYFLSTAGEKAAALLDNRAIYTQTDRAGTQWSFNGTAWAREGKADTTNDGVDNPTAMPIVASYEKARELNYQAT NAAAALALKDAPAPQDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44316; Mature: 44316
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDKDVSTNRLYLPVEGDLADKLETSPHRGRTRSSYTDGINDTLNDILDSPDGDAAMRND CCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH AAALKRVAAQVHDLQDTLKVALINGDMFATTPDRLTKAEANAQNRSTLSEYEQYRTTHAD HHHHHHHHHHHHHHHHHHEEEEECCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QLKTLRAMSNVESEWFAITHSEQRIVKVIDDARTTGKNLVAVPGEPDAITREIAGREEFR HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCHHHHH MAIAHAEDAGRVRLSESNAALVKQVLDDTPTNIGSAARGIRQSVATIPHPSYTPLSQRGF HHHHCCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCC TTAELLAGDLSAGQALRTAGLLATAADTVMTGQRATHLLGQDNPLAAQSELAHFAGRNVG CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCC GWAGGTAAAYALGSSGAGPMVLIAADAYFLSTAGEKAAALLDNRAIYTQTDRAGTQWSFN CCCCCHHHHHCCCCCCCCCEEEEEECHHHHHCCCHHHHHHHCCCEEEEECCCCCCEEECC GTAWAREGKADTTNDGVDNPTAMPIVASYEKARELNYQATNAAAALALKDAPAPQDP CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHEEEECCCCCCCCC >Mature Secondary Structure MIDKDVSTNRLYLPVEGDLADKLETSPHRGRTRSSYTDGINDTLNDILDSPDGDAAMRND CCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH AAALKRVAAQVHDLQDTLKVALINGDMFATTPDRLTKAEANAQNRSTLSEYEQYRTTHAD HHHHHHHHHHHHHHHHHHEEEEECCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QLKTLRAMSNVESEWFAITHSEQRIVKVIDDARTTGKNLVAVPGEPDAITREIAGREEFR HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCHHHHH MAIAHAEDAGRVRLSESNAALVKQVLDDTPTNIGSAARGIRQSVATIPHPSYTPLSQRGF HHHHCCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCC TTAELLAGDLSAGQALRTAGLLATAADTVMTGQRATHLLGQDNPLAAQSELAHFAGRNVG CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCC GWAGGTAAAYALGSSGAGPMVLIAADAYFLSTAGEKAAALLDNRAIYTQTDRAGTQWSFN CCCCCHHHHHCCCCCCCCCEEEEEECHHHHHCCCHHHHHHHCCCEEEEECCCCCCEEECC GTAWAREGKADTTNDGVDNPTAMPIVASYEKARELNYQATNAAAALALKDAPAPQDP CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA